BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	1,028,065	T→C	intergenic (‑41/‑178)	sulA ← / → sxy	cell division inhibitor SulA/CRP‑S regulon transcriptional coactivator Sxy

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	1,028,065	0	T	C	100.0%	547.6 / NA	165	intergenic (‑41/‑178)	sulA/sxy	cell division inhibitor SulA/CRP‑S regulon transcriptional coactivator Sxy
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (80/85); total (80/85)

Only 100 of 180 total aligned reads displayed.

AAGCCCGGCTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGTACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCGTTAA  >  NZ_CP025268/1027929‑1028201

 aGCCCGGCTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACAt                                                                                                                                      <  1:541974/140‑1 (MQ=255)

      ggCTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGCACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCCGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGt                                                                                                                                 >  2:2557722/1‑140 (MQ=255)

      ggCTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGt                                                                                                                                 <  2:1822156/140‑1 (MQ=255)

      ggCTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGt                                                                                                                                 <  1:2757658/140‑1 (MQ=255)

      ggCTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGt                                                                                                                                 <  2:3691940/140‑1 (MQ=255)

      ggCTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGt                                                                                                                                 >  1:555824/1‑140 (MQ=255)

        cTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGa                                                                                                                               <  2:3660936/140‑1 (MQ=255)

             gtgtTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGacaaca                                                                                                                          <  2:2358467/140‑1 (MQ=255)

                ttttCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAg                                                                                                                       >  1:839285/1‑140 (MQ=255)

                  ttCCGTAGAGACACGCGCAAGTTTACTTGCTGCGGATGAGACCGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATACAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGAt                                                                                                                     >  2:5084617/1‑140 (MQ=255)

                   tCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATc                                                                                                                    >  2:3576607/1‑140 (MQ=255)

                   gccGTAGAGACACGCGCAATGTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGGCTGAAGTGTACATAATCAATCCAGCCCCTTTGAGTTACTGTATGGATGTACGGCACAGCCAGTGACAACAAAGATc                                                                                                                    >  2:1873049/2‑140 (MQ=255)

                    ccGTACAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAACAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCACATCTGAGTCACTGTATGGATGTATAGCCCATCCAGTGACAACAAAGATCa                                                                                                                   <  2:4249368/140‑1 (MQ=255)

                        agagACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAAccc                                                                                                               >  1:4638151/1‑140 (MQ=255)

                             cacGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTAttt                                                                                                          <  2:3459906/140‑1 (MQ=255)

                              acGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTAtttt                                                                                                         <  2:4949782/140‑1 (MQ=255)

                                      ttttACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAaga                                                                                                 <  1:624992/140‑1 (MQ=255)

                                       tttACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAagag                                                                                                <  1:4115551/140‑1 (MQ=255)

                                                tgcGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCaaa                                                                                       >  1:2548600/1‑140 (MQ=255)

                                                               cgaAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGa                                                                        >  1:2686044/1‑140 (MQ=255)

                                                                    aaCGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGa                                                                   <  1:3891338/140‑1 (MQ=255)

                                                                    aaCGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGa                                                                   <  1:1031310/140‑1 (MQ=255)

                                                                         tgtgCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTCTTTTCGGCAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACa                                                              <  2:1035755/140‑1 (MQ=255)

                                                                         tgtgCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACa                                                              >  2:4950130/1‑140 (MQ=255)

                                                                         tgtgCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACa                                                              >  1:1614363/1‑140 (MQ=255)

                                                                           tgCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATa                                                            >  2:4862068/1‑140 (MQ=255)

                                                                              aTAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAAt                                                         <  2:726105/140‑1 (MQ=255)

                                                                              aTAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAAt                                                         >  1:757002/1‑140 (MQ=255)

                                                                                 gCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTaa                                                      >  1:4773904/1‑140 (MQ=255)

                                                                                  ccTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAAt                                                     >  2:2988470/1‑140 (MQ=255)

                                                                                    tGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCt                                                   >  1:3479076/1‑140 (MQ=255)

                                                                                          gtACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGcccc                                             >  1:994153/1‑140 (MQ=255)

                                                                                           tgcATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTGGTTGGTGACGGGAAAACATGAATTAATCTTGCCCCt                                            >  1:2847716/3‑140 (MQ=255)

                                                                                           tACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCCGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCt                                            >  2:753943/1‑140 (MQ=255)

                                                                                           tACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCt                                            >  2:982152/1‑140 (MQ=255)

                                                                                           tACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCt                                            >  1:100060/1‑140 (MQ=255)

                                                                                           tACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCt                                            <  2:1241987/140‑1 (MQ=255)

                                                                                           tACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCt                                            >  2:163971/1‑140 (MQ=255)

                                                                                           tACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCt                                            >  2:2082772/1‑140 (MQ=255)

                                                                                           tACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCt                                            <  1:2698204/140‑1 (MQ=255)

                                                                                           tACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGAAAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCt                                            <  2:4027646/140‑1 (MQ=255)

                                                                                            aCATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCtt                                           <  2:2931351/140‑1 (MQ=255)

                                                                                            aCATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTAAAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATATATTAATCTTGCCCCtt                                           >  1:2832483/1‑140 (MQ=255)

                                                                                             cATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTa                                          <  1:3741454/140‑1 (MQ=255)

                                                                                                aatcaatcCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGa                                       >  1:418034/1‑140 (MQ=255)

                                                                                                aatcaatcCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGa                                       <  1:1450618/140‑1 (MQ=255)

                                                                                                aatcaatcCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGa                                       >  1:616022/1‑140 (MQ=255)

                                                                                                   caatcCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCATCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATa                                    >  1:4233395/1‑140 (MQ=255)

                                                                                                     atcCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAg                                  >  1:3943441/1‑140 (MQ=255)

                                                                                                     atcCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAg                                  >  2:1922213/1‑140 (MQ=255)

                                                                                                     atcCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTCAAGAATAAg                                  >  2:456060/1‑140 (MQ=255)

                                                                                                      tcCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGt                                 >  2:1302882/1‑140 (MQ=255)

                                                                                                          gCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGcc                             <  2:1406085/140‑1 (MQ=255)

                                                                                                          gCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGcc                             <  2:1406274/140‑1 (MQ=255)

                                                                                                          gCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGcc                             >  1:3852277/1‑140 (MQ=255)

                                                                                                          gCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGcc                             <  2:4317891/140‑1 (MQ=255)

                                                                                                          gCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGcc                             >  1:3840069/1‑140 (MQ=255)

                                                                                                          gCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTCTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGcc                             <  1:2963090/140‑1 (MQ=255)

                                                                                                           ccccTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCt                            >  2:499864/1‑140 (MQ=255)

                                                                                                              cTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTAtt                         >  1:2607534/1‑140 (MQ=255)

                                                                                                                gtgAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTAtttt                       <  1:4911282/140‑1 (MQ=255)

                                                                                                                gtgAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTAtttt                       >  1:4804465/1‑140 (MQ=255)

                                                                                                                gtgAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTAtttt                       >  1:3683770/1‑140 (MQ=255)

                                                                                                                gtgAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTAtttt                       >  1:3558094/1‑140 (MQ=255)

                                                                                                                  gcgTTACTGAATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGCAAAGAGCATCGCAAATTTTGTCGTTGGTGCCGGGAAAACATAAATTAATCTTGCCCCTTAAGCACAAGTTGCCTATTTTCg                     <  2:1328905/138‑1 (MQ=255)

                                                                                                                  gAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATGAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCg                     <  2:3774540/140‑1 (MQ=255)

                                                                                                                  gAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCg                     <  2:2548600/140‑1 (MQ=255)

                                                                                                                  gAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCg                     <  1:3579913/140‑1 (MQ=255)

                                                                                                                  gAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCg                     <  1:1873770/140‑1 (MQ=255)

                                                                                                                  gAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCg                     <  2:900184/140‑1 (MQ=255)

                                                                                                                    gTTACTGTATGGATGTACAGCACATCCAGTGACAACTAAGATCAGCCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAAGCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTa                   <  2:3152908/140‑1 (MQ=255)

                                                                                                                      tACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGt                 <  1:2075519/140‑1 (MQ=255)

                                                                                                                      tACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCAATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGGCTATTTTCGTAGt                 >  2:4427508/1‑140 (MQ=255)

                                                                                                                       aCTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGtt                >  1:898206/1‑140 (MQ=255)

                                                                                                                         tGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTaa              <  1:3699663/140‑1 (MQ=255)

                                                                                                                            aTGGATGTACAGCACATCCAGTGACTACAAAGATCAACCCTATCTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACgg           <  1:4649987/140‑1 (MQ=255)

                                                                                                                            aTGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTTAGAATAAGTTGCCTATTTTCGTAGTTAACgg           <  2:3878194/140‑1 (MQ=255)

                                                                                                                            aTGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACgg           <  1:303847/140‑1 (MQ=255)

                                                                                                                            aTGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACgg           <  1:4332766/140‑1 (MQ=255)

                                                                                                                            aTGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACgg           <  2:1057914/140‑1 (MQ=255)

                                                                                                                            aTGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACgg           <  1:1758178/140‑1 (MQ=255)

                                                                                                                            aTGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACgg           <  2:520065/140‑1 (MQ=255)

                                                                                                                            aTGGATGTACAGCACATCCAGTGACAACAAAGATAACCCCTACTTACGAAACAAGCCTCAAAAATATTGTCCTTGGTGACGGAAAAACATAAATTAATCTTGCCCCTTAAGAATCAATTGCCCCTTTTCGTAGTTAACgg           <  2:1719357/140‑1 (MQ=255)

                                                                                                                             tGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGa          <  1:4950130/140‑1 (MQ=255)

                                                                                                                             tGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGa          >  2:4169056/1‑140 (MQ=255)

                                                                                                                             tGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGa          >  2:1865451/1‑140 (MQ=255)

                                                                                                                             tGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGa          >  1:4708979/1‑140 (MQ=255)

                                                                                                                             tGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATGTTGTCGTTGGTGACGGGAAAACATAAATTAATATTGCCCCTTAAGAATAAGTTGCCTCTTTTCGTAGTTAACGGa          <  2:329434/140‑1 (MQ=255)

                                                                                                                             gggATGTGGAGCACAGCCAGTGACAAGAAAGTTGAAGCCTATTTTCGGAAAGAGCCTCGCAACTGTTGTCGTTGGTGACGGGGAAACATAAAGTAAGCTTGCGCCTGAAGAATAAGTGGCCTATTTTGGTAGTTAACGGa          >  2:5062229/2‑140 (MQ=255)

                                                                                                                                aTGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATcc       >  2:3347423/1‑140 (MQ=255)

                                                                                                                                 tGTACAGCACAGCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCg      <  2:359880/140‑1 (MQ=255)

                                                                                                                                  gtacagcacaTCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCGt     >  1:4368672/1‑140 (MQ=255)

                                                                                                                                  gtacagcacaTCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCGt     >  1:1390624/1‑140 (MQ=255)

                                                                                                                                   tacagcacaTCCAGTGACAACAAAGATCAACTCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGGCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCGtt    >  2:1189711/1‑140 (MQ=255)

                                                                                                                                   tacagcacaTCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCGtt    >  2:4063250/1‑140 (MQ=255)

                                                                                                                                   tacagcacaTCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCGtt    >  1:228602/1‑140 (MQ=255)

                                                                                                                                   tacagcacaTCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCGtt    >  1:1983475/1‑140 (MQ=255)

                                                                                                                                   tacagcacaTCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCGtt    >  2:3121004/1‑140 (MQ=255)

                                                                                                                                     cagcacaTCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCGTTaa  >  2:379205/1‑140 (MQ=255)

                                                                                                                                     cagcacaTCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCGTTaa  >  2:2976809/1‑140 (MQ=255)

AAGCCCGGCTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGTACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCGTTAA  >  NZ_CP025268/1027929‑1028201

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`