| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 255,488 | G→A | R20C (CGT→TGT) | pepD ← | cytosol nonspecific dipeptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 255,488 | 0 | G | A | 99.2% | 1335.7 / NA | 361 | R20C (CGT→TGT) | pepD | cytosol nonspecific dipeptidase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (200/158); minor base C (1/2); total (201/160) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.86e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 361 total aligned reads displayed.
TACCTGCGGTAGCAGGTTTACGAATCAGGATATTACCTACCTGATCGCGTTCGACATGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACGGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGCAGGTCACAGGGTTAGCAGAAAATGTTGTCAACACAAGAC > NZ_CP025268/255353‑255623 | cTGCGGTAGCATGTTTACGACTCAGGATATTACCTAGCGGATCGCGTTCGACATGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATGTTg < 2:5267/140‑1 (MQ=255) tGCGGTAGCAGGTTTACGAATCAGGATATTACCTACCTGATCGCGTTCGACATGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTgg < 1:517225/140‑1 (MQ=255) ggCGGTAGCACGTTTACGAATCAGGATATTACCTACCTGATCGCGTTCGACATGGAAACCGTACACGTTTGCCCAACCCACAA‑TGTATTCAGCGAGTTGCCCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTgg < 2:2958285/139‑1 (MQ=255) gcagttgCACGTTTACGGATCAGGATATTACCTTCACGATCGCGTTCGAAAGGGAAACCATTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATGCTGGc < 2:6204/134‑1 (MQ=255) gCGGTAGCAGGTTTACGAATCAGGATATTACCTACCTGATCGCGTTCGACATGGGAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAAATTTTGGc > 2:265712/1‑140 (MQ=255) cGGTAGCAGGTTTACGAATCAGGATATTACCTACCTGATCGCGTTCGACATGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCa > 1:3910163/1‑140 (MQ=255) aGGTTTACGAATCAGGATATTACCTACCTGATCGCGTTCGACATGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAatat < 1:2269765/140‑1 (MQ=255) aCGAATCAGGATATTACCTACCTGATCGCGTTCGACATGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCcaca > 2:1449743/1‑140 (MQ=255) cGAATCAGGATATTACCTACCTGATCGCGTTCGACATGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAg < 2:1100244/140‑1 (MQ=255) cGAATCAGGATATTACCTAACTGATCGCGTTCGACATGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAg < 2:4844584/140‑1 (MQ=255) cAGGATATTACTTACCTGATCGCGTTCAACATGGAAACCCTTATCTGTTCCCCACCCAACAA‑TGTATTCAGCGACTTGCTCTTCATGATAGCACGGGTGACGAATAGAACCGATTTTTGCAAACATATCCCACAGCGGCt < 2:4300491/140‑1 (MQ=255) cAGGATATTACCTACCTGATCGCGTTCGACATGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCt > 1:132622/1‑140 (MQ=255) cAGGATATTACCTACCTGATCGCGTTCGACATGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCt > 1:442773/1‑140 (MQ=255) cAGGATATTACCTACCTGATCGCGTTCGACATGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCt < 1:2699406/140‑1 (MQ=255) cAGGATATCACCTACCTGATCTCGTTCGACATGGAAACTTTTCTCTTTTGCCCAGCCAACAA‑TGTATTCAGCGAGTTGCTCTTGATGATTGGACGGGTGAGGAATAGAACAGTTTTTTGCACATATGTCCCACAGCgtca > 2:3111201/1‑137 (MQ=255) aGGATATTACCTACCTGATCGCGTTCGACATGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCtg > 1:4918640/1‑140 (MQ=255) aGGATATTACCTACCTGATCGCGTTCGACATGGAAACCTTTCTCTTTTGACCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCtg > 1:1480519/1‑140 (MQ=255) ggATATTACCTACCTGATCGCGTTCGACATGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCtgt < 1:4004178/140‑1 (MQ=255) gATATTACCTACCTGATCGCGTTCGACATGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCtgtg > 1:1056124/1‑140 (MQ=255) gATATTACCTACCTGATCGCGTTCGACATGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCtgtg > 1:2777031/1‑140 (MQ=255) atTACCTACCTGATCGCGTTCGACATGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGgag < 2:491087/140‑1 (MQ=255) atTACCTACCTGATCGCGTTCGACATGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGgag < 2:790421/140‑1 (MQ=255) atTACCTACCTGATCGCGTTCGACATGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGgag < 1:2294101/140‑1 (MQ=255) atTACCTACCTGATCGCGTTCGACATGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGgag < 2:3699179/140‑1 (MQ=255) atTACCTACCTGATCGCGTTCGACATAGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGgag < 2:2452069/140‑1 (MQ=255) acctGATCGCGTTCGACATGGAAACCTTTCTCTTTTGCCCAACCACCAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGCCTGTGGAGATAATTg > 2:3238672/1‑140 (MQ=255) acctGATCGCGTTCGACATGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTg > 1:1837695/1‑140 (MQ=255) acctGATCGCGTTCGACATGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTg > 2:640025/1‑140 (MQ=255) acctGATCGCGTTCGACATGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTg > 1:4737386/1‑140 (MQ=255) acctGATCGCGTTCGACATGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTg > 2:1887980/1‑140 (MQ=255) acctGATCGCGTTCGACATGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTg > 1:4161538/1‑140 (MQ=255) acctGATCGCGTTCGACATGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTg > 1:3514854/1‑140 (MQ=255) acctGATCGCGTTCGACATGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCACACAGCGGCTGTGGAGAGAATTg > 2:1045288/1‑140 (MQ=255) acctGATCGCGTTCGACATGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGGGAGGAATAGAACAGATTTTGGCAAAAATAGCCCACAGCGGCTGTGGAGATAATTg > 2:4643131/1‑140 (MQ=255) ctGATCGCGTTCGACATGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTgag < 2:2189952/140‑1 (MQ=255) ctGATCGCGTTCGACATGGAAACCTTCCTCTTTTGCCCCACCAACGA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGCGCAGATTTTGGCAAACATATCCCACAGCGGCTGTGGAGATAATTgag < 2:4175026/140‑1 (MQ=255) tGATCGCGTTCGACATTGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTgaga < 1:594279/140‑1 (MQ=255) tGATCGCGTTCGACATGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTgaga < 2:1666994/140‑1 (MQ=255) tGATCGCGTTCGACATGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTgaga < 2:700501/140‑1 (MQ=255) tGATCGCGTTCGACATGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTgaga < 2:4723152/140‑1 (MQ=255) gATCGCGTTCGACATGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGAc > 2:3503809/1‑140 (MQ=255) gATCGCGTTCGACATGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGAc > 1:3213100/1‑140 (MQ=255) aTCGCGTTCGACATGGAAACCTTTCTCTTTTTCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGCCGGGGGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGAGAATTGAGACa > 2:3383189/1‑140 (MQ=255) cgcgTTCGACATGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGt > 1:2139424/1‑140 (MQ=255) cgcgTTCGACATGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGGGAGGAATAGAACAGAGTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGt > 2:1817646/1‑140 (MQ=255) ttCGACATGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAg > 1:3090266/1‑140 (MQ=255) ttCGACATGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAg > 1:2519637/1‑140 (MQ=255) tGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGtt < 1:2480235/140‑1 (MQ=255) ggAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTa > 1:4629548/1‑140 (MQ=255) aaCCTTTCTCTTTTGCCCAACCAACAATTGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAg < 1:4503001/140‑1 (MQ=255) aaCCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGt < 1:1398761/140‑1 (MQ=255) tttCTCTGTTGCCCAACCTACAA‑TGTATTTAGCGAGGTGCTCTTCATGATAGGACGGGGGAGGAATAGAACAGATGTTGGCAAAAATATCCCACAGCGGCGGTGGAGGTAATTGAGACAGTTCAGACACGTTAAGTCAcc > 2:4452464/1‑140 (MQ=255) tGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATc < 1:2569462/140‑1 (MQ=255) ccaaccaaCAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCAcc < 1:3834543/140‑1 (MQ=255) aaccaacAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCACCCg < 1:3131520/140‑1 (MQ=255) aaccaacAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCACCCg > 2:3803956/1‑140 (MQ=255) aaccaacAA‑TGTATTCAACGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCACCCg < 2:3845543/140‑1 (MQ=255) caacaa‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCACCCGCaa < 2:4504083/140‑1 (MQ=255) gTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCACCCGCAAAACAGTa < 1:781124/140‑1 (MQ=255) ttCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAGAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCACCTTGTCGATCACCCGCAAAACAGTATTg > 1:4471208/1‑140 (MQ=255) ttCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTg > 2:352209/1‑140 (MQ=255) tCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGc < 1:1679106/140‑1 (MQ=255) tCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGc < 1:857877/140‑1 (MQ=255) cAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGCTCACCCGCAAAACAGTATTGCa < 2:2861885/140‑1 (MQ=255) cAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGCa < 1:3626180/140‑1 (MQ=255) cAGCGAGTTGCTCTTCATGATACGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTACAGACACGTTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGCa < 2:2824392/140‑1 (MQ=255) aGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGCAg > 1:2975845/1‑140 (MQ=255) aGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGCAg > 2:1321255/1‑140 (MQ=255) aGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCGTGGCGATCACCCGCAAAACAGTATTGCAg > 2:2364753/1‑140 (MQ=255) gCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGCAgg > 2:4802603/1‑140 (MQ=255) gCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGCAgg > 1:3711599/1‑140 (MQ=255) gAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGCAGGTc < 2:4770711/140‑1 (MQ=255) gTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGCAGGTcac > 1:801381/1‑140 (MQ=255) gTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGCAGGTcac < 2:5082411/140‑1 (MQ=255) gTTGCTCTTCATGATAGGACGGGGGAGGAAGAGGACAGATTGTGGCAAAAGTAGCCCACAGCGGCTGGGGAGATAATTGAGACAGTTCAGACACGGTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGCAGGTcac > 2:406852/1‑140 (MQ=255) cctCATGATAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCCCAGCGGCTGTGGAGATAATTGAGACAGTTCAGACCCGTTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGCAGGTCACAGGGtt < 1:5038438/138‑1 (MQ=255) cATGATAGGACGGGTGCGGAATAGAACAGACTTTGGCAAAAATATTCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGGTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGGAGGTTACAGGGTTAGc > 2:1208105/1‑140 (MQ=255) tAGGACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGCAGGTCACAGGGTTAGCAGaaa > 2:2226765/1‑140 (MQ=255) ggACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGCAGGTCACAGGGTTAGCAGAAAAt < 1:1012962/140‑1 (MQ=255) gACGGTTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGATGTGGAGGTAATTGAGACAGTTCAGACACGTTAAGTCTCCGTGTCGAGCACCCGCAAAACATTATTGCATGTCACAGGGTTAGCAGAAAAta > 2:4004439/1‑139 (MQ=255) gACGGGTGAGGGATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCGTTGTCGATCACCCGCAAAACAGTATTGCAGGTCACAGGGTTAGCAGAAAAtg > 2:3624401/1‑140 (MQ=255) gACGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGCAGGTCACAGGGTTAGCAGAAAAtg > 2:3050933/1‑140 (MQ=255) cGGGTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGCAGGTCACAGGGTTAGCAGAAAAtgtt < 1:3366299/140‑1 (MQ=255) ggTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATGACCCGCAAAACAGTATTGCAGGTCACAGGGTTAGCAGAAAAtgttgt < 2:4050915/140‑1 (MQ=255) ggTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGCAGGTCACAGGGTTAGCAGAAAAtgttgt < 1:1438071/140‑1 (MQ=255) ggTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGCAGGTCACAGGGTTAGCAGAAAAtgttgt < 1:431357/140‑1 (MQ=255) gTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGCAGGTCACAGGGTTAGCAGAAAATGTTGTc > 2:3084390/1‑140 (MQ=255) gTGAGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGCAGGTCACAGGGTTAGCAGAAAATGTTGTc > 1:1984674/1‑140 (MQ=255) aGGAATAGAACAGATTTTGGCAAAAGTATCCCACAGCGGCTGTGGAGATAATTGAGACAGGTCAGACACGTTAAGTCTGGTTGTCGATCACCCGCAAAACAGTATTGCAGGTGACAGGGTTAGCAGAAGATGTTGTCAac > 2:2677746/1‑140 (MQ=255) aGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGCAGGTCACAGGGTTAGCAGAAAATGTTGTCAac > 2:4341824/1‑140 (MQ=255) aGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGCAGGTCACAGGGTTAGCAGAAAATGTTGTCAac > 2:2103722/1‑140 (MQ=255) aGGAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGCAGGTCACAGGGTTAGCAGAAAATGTTGTCAac > 1:941944/1‑140 (MQ=255) ggAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGCAGGTCACAGGGTTAGCAGAAAATGTTGTCAaca < 2:864881/140‑1 (MQ=255) ggAATAGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGCAGGTCACAGGGTTAGCAGAAAATGTTGTCAaca < 1:2048936/140‑1 (MQ=255) aGAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGCAGGTCACAGGGTTAGCAGAAAATGTTGTCAACACAAGa < 1:1861073/140‑1 (MQ=255) gAACAGATTTTGGCACAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTCAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGCAGGTCACAGGGTTAGCAGAAAATGTTGTCAACACAAGAc > 2:2391094/1‑140 (MQ=255) gAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGCAGGTCACAGGGTTAGCAGAAAATGTTGTCAACACAAGAc > 2:501096/1‑140 (MQ=255) gAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGCAGGTCACAGGGTTAGCAGAAAATGTTGTCAACACAAGAc > 2:3569685/1‑140 (MQ=255) gAACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTAAGACACGTTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGCAGGTAACAGGGTTAGAAGAAAATGTTGTCAACACAAGaa > 2:1546630/1‑139 (MQ=255) gAACAGAGTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCCGACACGTTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGCAGGTCACAGGGTTAGTAGAAAATGTTGTCAACACAAGAc > 2:177380/1‑140 (MQ=255) | TACCTGCGGTAGCAGGTTTACGAATCAGGATATTACCTACCTGATCGCGTTCGACATGGAAACCTTTCTCTTTTGCCCAACCAACAA‑TGTATTCAGCGAGTTGCTCTTCATGATAGGACGGGTGAGGAATAGAACGGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGCAGGTCACAGGGTTAGCAGAAAATGTTGTCAACACAAGAC > NZ_CP025268/255353‑255623 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |