BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	2,710,506	T→C	S215G (AGC→GGC)	lepA ←	translation elongation factor 4

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	2,710,506	0	T	C	100.0%	989.1 / NA	296	S215G (AGC→GGC)	lepA	translation elongation factor 4
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (167/129); total (167/129)

Only 100 of 296 total aligned reads displayed.

ACATACGAGCCAGCCTACTTCGCCACATTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCTGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTG  >  NZ_CP025268/2710369‑2710641

 caTACGAGCCAGCCTACTTCGCCACATTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGtt                                                                                                                                      >  1:751337/1‑140 (MQ=255)

 caTACGAGCCAGCCTACTTCGCCACATTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGtt                                                                                                                                      >  2:2933117/1‑140 (MQ=255)

 caTACGAGCCAGCCTACTTCGCCACATTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGGCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCGGGGTGCCGtt                                                                                                                                      >  2:2340302/1‑140 (MQ=255)

     cGAGCCAGCCTACTTCGCCACATTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTa                                                                                                                                  <  2:2003584/140‑1 (MQ=255)

       agccagccTACTTCGCCACATTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAAt                                                                                                                                <  2:768498/140‑1 (MQ=255)

           agccTACTTCGCCACTTTTCGGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACgg                                                                                                                            <  1:4397395/140‑1 (MQ=255)

           agccTACTTCGCCACATTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACgg                                                                                                                            <  2:2104189/140‑1 (MQ=255)

           agccTACTTCGCCACATTTCAGTTCAGTGCGGTCAACCTGGTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACgg                                                                                                                            <  1:3997248/140‑1 (MQ=255)

             ccTACTTCGCCACATTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGAt                                                                                                                          <  2:1715280/140‑1 (MQ=255)

             ccTACTTCGCCACATTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGAt                                                                                                                          >  2:4215583/1‑140 (MQ=255)

             ccTACTTCGCCACATTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGAt                                                                                                                          <  1:2363382/140‑1 (MQ=255)

             catACTTCGCCACATTTCAGTGCAGTGCGGTCAACCTGTTTCGGCGGGAAGATCCTCAAACGGACGGCCTTATAGGTCTGCCTGCTACTCATGACTTTCACTTTGTCGCCCGTACGCAGGCTGCCGTTTTTAATACGGAt                                                                                                                          <  2:1644100/138‑1 (MQ=255)

              cTACTTCGCCACATTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATa                                                                                                                         >  1:2190294/1‑140 (MQ=255)

                  ttCGCCACATTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTg                                                                                                                     >  1:4172383/1‑140 (MQ=255)

                  ttCGCCACATTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTg                                                                                                                     >  2:3293991/1‑140 (MQ=255)

                  ttCGCCACATTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTg                                                                                                                     >  1:1572447/1‑140 (MQ=255)

                    cGCCACATTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGaa                                                                                                                   >  1:212156/1‑140 (MQ=255)

                      ccACATTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAaac                                                                                                                 <  2:3472886/140‑1 (MQ=255)

                      ccACATTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAaac                                                                                                                 <  1:365933/140‑1 (MQ=255)

                        acaTTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAaacaa                                                                                                               <  2:3596568/140‑1 (MQ=255)

                            ttcagttcagTGCGGTCACCCTTTTTTGGCGTGAAGATGCCCCGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTACCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACCACGcc                                                                                                           <  2:4008784/140‑1 (MQ=255)

                            ttcagttcagTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGcc                                                                                                           <  1:3678875/140‑1 (MQ=255)

                            ttcagttcagTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGcc                                                                                                           <  1:2919768/140‑1 (MQ=255)

                             tcagttcagtGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGccc                                                                                                          <  1:3524731/140‑1 (MQ=255)

                                 ttcagtGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGt                                                                                                      <  2:2133396/140‑1 (MQ=255)

                                   cagtGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAg                                                                                                    <  1:3912539/140‑1 (MQ=255)

                                   cagtGCGGTCAACCTGTTACGGCGTGACGATGCCCAGACGTTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCGTACGCAGGGTGCCGTTTGTAATACGGATAAGTGAAACAACCCCCAGGTAg                                                                                                    <  2:2744785/140‑1 (MQ=255)

                                      tGCGGTCGACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTGCGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTg                                                                                                 >  2:4042014/1‑140 (MQ=255)

                                      tGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTg                                                                                                 >  1:4970259/1‑140 (MQ=255)

                                      tGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTg                                                                                                 >  1:3110092/1‑140 (MQ=255)

                                      tGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTg                                                                                                 >  2:2706916/1‑140 (MQ=255)

                                      tGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTg                                                                                                 >  2:4769605/1‑140 (MQ=255)

                                      tGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTAGCCCTTACGCAGGGTGCCGTTTTTAATACGGACAAGTGAAACAACGCCCAGGGAGTTg                                                                                                 >  2:3372441/1‑140 (MQ=255)

                                      tGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGGTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGtgg                                                                                                 >  1:551056/1‑138 (MQ=255)

                                      tGCGGGCAACCTGTTTCGGCCTGAAGATGCCAAGACGGGCGGCGTTATAGGCCTGCCCGGTACCCATGACTTTCACTTTGTCGCCCTTAAGCAGGGTGCCGTGTTTAATACGGATAAGTGAAACAAGACCCTGGTAGATg                                                                                                 >  2:1316211/1‑140 (MQ=255)

                                           tCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGaa                                                                                            >  2:1028353/1‑140 (MQ=255)

                                               cgtgcttCGGCGTGACGATGCCGCGACGGTCGGCTGTATAGGTCTGCCCGGTACTCATGACTTTCACTTTATCGCCGTGGCGCAGGGTGCCGTGGTTAAGACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACGAt                                                                                        <  2:2804204/135‑1 (MQ=255)

                                               ccTGTTTCGGCGTGAAGATGCCCAGTCGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCAt                                                                                        <  2:3419471/140‑1 (MQ=255)

                                                cTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTGCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATg                                                                                       <  2:4506353/140‑1 (MQ=255)

                                                  gTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAg                                                                                     <  1:4200742/140‑1 (MQ=255)

                                                  gTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAg                                                                                     <  1:4235366/140‑1 (MQ=255)

                                                    ttCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTc                                                                                   <  1:3834589/140‑1 (MQ=255)

                                                      cGGCGTGAAGATGCCCAGACCGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTAACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATCCGGATAAGTGAAACAACGCCCAGGTAGTTGTAGAACCATGAGTCGa                                                                                 <  2:1823951/140‑1 (MQ=255)

                                                      cGGCGTGAAGATGCCAAGACGGTCGGCGTTATAGGTCTGCCCCGTCCTCATGACTTTCACTTTTTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGa                                                                                 <  2:1503929/140‑1 (MQ=255)

                                                         cGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATaa                                                                              >  1:662705/1‑140 (MQ=255)

                                                         cGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATaa                                                                              <  2:3193783/140‑1 (MQ=255)

                                                           tGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAAtt                                                                            <  1:1843986/140‑1 (MQ=255)

                                                             aaGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAg                                                                          >  1:1245330/1‑140 (MQ=255)

                                                             aaGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAg                                                                          >  1:835433/1‑140 (MQ=255)

                                                             aaGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAg                                                                          >  2:3809982/1‑140 (MQ=255)

                                                                       gACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAAc                                                                <  2:1241627/140‑1 (MQ=255)

                                                                          ggTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACggg                                                             <  2:3149272/140‑1 (MQ=255)

                                                                            tCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGcc                                                           >  1:4369836/1‑140 (MQ=255)

                                                                            tCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGGAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGcc                                                           >  1:4149417/1‑140 (MQ=255)

                                                                            acGGCGTGATAGGTCTGCCCGGTACGCATGCCTTGCGCTTTGTCGGCCTTACGCAGGGGGCCGTTTTTAATACGGATAAGTGAAACAACGCCCCGGTATGTGTCGGACCATGATTCGATCATTAGTGGGTGTAACggggc                                                           >  2:4983454/2‑138 (MQ=255)

                                                                             cGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCt                                                          >  1:3329705/1‑140 (MQ=255)

                                                                                  ttATAGGTCTGCCCGGTACTCATTCCATTCGCTTTGTCGCCCTTACGCAGGCTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTAGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCgg                                                     >  1:3055233/1‑140 (MQ=255)

                                                                                    ataGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGAt                                                   <  1:2769091/140‑1 (MQ=255)

                                                                                      aGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCg                                                 >  2:889903/1‑140 (MQ=255)

                                                                                          cTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTGGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCtt                                             >  2:660468/1‑140 (MQ=255)

                                                                                          cTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCtt                                             >  1:3256988/1‑140 (MQ=255)

                                                                                          cTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCtt                                             >  1:1814328/1‑140 (MQ=255)

                                                                                           tGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTc                                            >  1:3289636/1‑140 (MQ=255)

                                                                                            gCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGACCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTcc                                           >  1:4178128/1‑140 (MQ=255)

                                                                                             cccGGTCCTCATGACTTTCAATTTGTCGCCCTTACGCCGGGGGCCGTTTTTAATACGGATAAGTGAAACAACGGCCAGGCAGTTGGCGAACCATGGGTCGATAATTAGTGCCTGCAACGGGCATTCCGGGTCGCCTTAcg                                          >  2:4399410/1‑140 (MQ=255)

                                                                                             cccGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCcg                                          >  1:3704531/1‑140 (MQ=255)

                                                                                             cccGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCcg                                          >  2:1447922/1‑140 (MQ=255)

                                                                                             cccGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCcg                                          >  2:3511172/1‑140 (MQ=255)

                                                                                             cccGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCcg                                          >  1:3185576/1‑140 (MQ=255)

                                                                                             cccGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCcg                                          >  2:2612685/1‑140 (MQ=255)

                                                                                                  tACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCcggcggc                                     >  1:1094302/1‑140 (MQ=255)

                                                                                                  tACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCcggcggc                                     >  1:2659869/1‑140 (MQ=255)

                                                                                                     tCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGa                                  <  1:3350339/140‑1 (MQ=255)

                                                                                                       aTGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGCGTCGATAATTCGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCTGAAt                                >  1:3895086/1‑140 (MQ=255)

                                                                                                       aTGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAAt                                >  1:617507/1‑140 (MQ=255)

                                                                                                       aTGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAAt                                >  2:3855739/1‑140 (MQ=255)

                                                                                                       aTGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAAt                                >  1:3493344/1‑140 (MQ=255)

                                                                                                       aTGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGGCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAAt                                >  1:2588819/1‑140 (MQ=255)

                                                                                                       aTGACTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCAAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAAt                                >  1:4039948/1‑140 (MQ=255)

                                                                                                           cTTTCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTcg                            <  1:2809711/140‑1 (MQ=255)

                                                                                                           cTTCCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTcg                            <  1:4471401/140‑1 (MQ=255)

                                                                                                            tttCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTcgc                           >  1:4281086/1‑140 (MQ=255)

                                                                                                            tttCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTcgc                           >  1:4893710/1‑140 (MQ=255)

                                                                                                            tttCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTcgc                           >  2:2512490/1‑140 (MQ=255)

                                                                                                             ttCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTAGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTcgcg                          <  2:3925828/140‑1 (MQ=255)

                                                                                                              tCACTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCTGAATGTCtcgc                         >  1:3379428/1‑140 (MQ=255)

                                                                                                              tCACTTTGTCGCCCTTACGCAGGGGGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGGGCCTGCAACGGGCCTTCCGCATCGCCTTCCGGCGGCGGAATGTCgcgc                         >  1:1184827/1‑140 (MQ=255)

                                                                                                                 cTTTGTCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCAcc                      >  1:1801044/1‑140 (MQ=255)

                                                                                                                      tCGCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACg                 >  1:1435662/1‑140 (MQ=255)

                                                                                                                        gCCCTTACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGtt               <  1:1028353/140‑1 (MQ=255)

                                                                                                                             tACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCgaga          <  1:1906120/140‑1 (MQ=255)

                                                                                                                             tACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCgaga          <  2:63476/140‑1 (MQ=255)

                                                                                                                             tACGCAGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCgaga          <  2:1110575/140‑1 (MQ=255)

                                                                                                                                  aGGGTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCCACGGGCCTTCCGGATCGCCTTCCGGCGGAGGAATGTAGCGCACCAGACGTTCGAGAACGTc     <  1:525997/140‑1 (MQ=255)

                                                                                                                                    ggTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGa                                                                                             >  2:4702529/1‑50 (MQ=255)

                                                                                                                                    ggTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGa                                                                                             <  1:4702529/50‑1 (MQ=255)

                                                                                                                                    ggTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGCACGTCCt   >  2:4838316/1‑140 (MQ=255)

                                                                                                                                    ggTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCt   >  1:1975628/1‑140 (MQ=255)

                                                                                                                                    ggTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCt   >  1:1734736/1‑140 (MQ=255)

                                                                                                                                    ggTGCCGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCt   >  2:1323602/1‑140 (MQ=255)

ACATACGAGCCAGCCTACTTCGCCACATTTCAGTTCAGTGCGGTCAACCTGTTTCGGCGTGAAGATGCCCAGACGGTCGGCGTTATAGGTCTGCCCGGTACTCATGACTTTCACTTTGTCGCCCTTACGCAGGGTGCTGTTTTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTG  >  NZ_CP025268/2710369‑2710641

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`