| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,016,591 | T→C | *257* (TAA→TAG) | yqeC ← | selenium cofactor biosynthesis protein YqeC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,016,591 | 0 | T | C | 99.7% | 1056.4 / NA | 313 | *257* (TAA→TAG) | yqeC | selenium cofactor biosynthesis protein YqeC |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (125/186); minor base A (1/0); total (126/187) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.04e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 313 total aligned reads displayed.
GGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATAT‑C‑TTTCAGTAACCCGGAATACCCGGGCCGTTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACATTGAGAAAAACGGTTAA > NZ_CP025268/3016455‑3016727 | gggAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTa > 2:3518330/1‑140 (MQ=255) aGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAAtt > 2:1904332/1‑140 (MQ=255) aGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAAtt > 2:3607511/1‑140 (MQ=255) aGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAAtt > 1:2516704/1‑140 (MQ=255) ggCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGTATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTgc > 1:1746646/1‑140 (MQ=255) ggCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTgc > 1:2616098/1‑140 (MQ=255) gCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTgcg > 1:704182/1‑140 (MQ=255) tATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTgcgcg < 2:2616098/140‑1 (MQ=255) tATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTCGCAGCCTCTGTGAAAATATTCATACCACCCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTgcgcg < 1:4003495/140‑1 (MQ=255) tCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGcgcgcg > 1:2224088/1‑140 (MQ=255) caacaaTTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGa < 2:2145223/140‑1 (MQ=255) acaaTTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGAtt < 2:6308/140‑1 (MQ=255) aTTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCa < 2:4501526/140‑1 (MQ=255) aTTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCa < 2:4565377/140‑1 (MQ=255) tttGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAg > 1:4833190/1‑140 (MQ=255) ttGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCCACCTCAATGTATATCC‑TTTCAGTACCCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAgc < 2:1659977/140‑2 (MQ=255) ttGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAgg < 1:4423371/140‑1 (MQ=255) tGCGCCATAGCACACGGACAATTTTGCTCTTAGAGTTTTGCAGCCTCTCTGAAAATATTCATACCAACCTCACTGGATATCC‑TTTCAGTACCCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGa < 2:4128463/140‑1 (MQ=255) gcgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGAt > 1:3739423/1‑140 (MQ=255) cgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg < 1:3233565/140‑1 (MQ=255) cgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg < 2:3397616/140‑1 (MQ=255) cgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg < 1:42607/140‑1 (MQ=255) cgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg < 2:2584639/140‑1 (MQ=255) cgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg < 2:2373577/140‑1 (MQ=255) cgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg < 1:4866630/140‑1 (MQ=255) cgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg < 1:2042573/140‑1 (MQ=255) cgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg < 1:855460/140‑1 (MQ=255) agcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg < 1:4509313/139‑1 (MQ=255) cATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TGGCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTc < 1:2482598/140‑1 (MQ=255) aTAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCt < 1:1555789/140‑1 (MQ=255) tAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCtt < 1:382687/140‑1 (MQ=255) cAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGta < 1:760061/140‑1 (MQ=255) aCAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGa > 2:2790740/1‑123 (MQ=255) aCAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGcc > 2:377233/1‑140 (MQ=255) aaTTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCcca < 2:4336650/140‑1 (MQ=255) aTTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCccag > 2:4960726/1‑140 (MQ=255) ctctTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGAt < 2:3696792/140‑1 (MQ=255) ctctTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGAt < 1:2310462/140‑1 (MQ=255) ctctTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGAt < 1:1375361/140‑1 (MQ=255) ctctTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGAt < 1:1230562/140‑1 (MQ=255) ctcgacaaGTTTATCAGCCACTGTGAAAATATTCATACCAACATCAATGGATATCC‑TTTCAGTAAGCGGACAAACCCGGGCCGCTAATTCACAAAGCTGCGCGCGATTGCAGGATGTTCTTGTATCTCGCCCAGCCAGAt < 2:2105177/133‑1 (MQ=255) ttCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGc < 1:1421079/140‑1 (MQ=255) cGAGTTTTGCAGCCTCTGTTTAAATATTCATACTAACCTCAATGGATATCC‑TTTCAGTAACCAGGAATACCTGGGCCGCTAATTCACACATCTGCGAGCTATTGCAGGATGTTATCGTATATAGCACAGCGAGAtttctt > 2:2473813/1‑136 (MQ=255) cGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTGACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg > 2:3642435/1‑111 (MQ=255) cGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGa > 1:24412/1‑109 (MQ=255) cGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCct > 2:69266/1‑140 (MQ=255) cGAGTTTTGCAGCCTCTGTGAAAATATCCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg < 1:3642062/111‑1 (MQ=255) aGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCctct < 1:1865471/140‑1 (MQ=255) tttGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTAcg < 1:3063258/140‑1 (MQ=255) ttacAGGCTCTGTGAAAGTCTTCATAGCGACCTCAATGGATAT‑CATTTCAGTAACCCTGAATACCCGGCCCGCTAATTCACAAATCTGCGCGGGACTGCAGGATGTTCTTGTATATCGCCCAGGCAGATTGCCTCTAcgt < 2:4702762/137‑1 (MQ=255) ttGCACCCTCTGTGAAAATATTCATCCCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACACATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTAcgt < 1:1921886/140‑1 (MQ=255) gCAGCCTCTGTGAAAATATTCATACCATCCTCAATGGATAT‑CGTTTCAGTAACCAGGTATACCCGCGCCGGTTATTCAGCAGCCTCCGCGCGGTTGCAGGATGTGCTTGTATATCCCCGGGCCAGATTGACTCTGcgtcg < 2:964115/140‑1 (MQ=255) tccatgAAAATACTCATACCAGCCTCAATGGATATCC‑TTAAAGTAACCCGGAATACCCGGGCCTCTAATTCACAAATCTGCGCGCGATTGCAGCATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGtgttgt < 2:1472139/136‑1 (MQ=255) tgtgAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGa < 2:1023377/93‑1 (MQ=255) tgtgAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGa > 1:1023377/1‑93 (MQ=255) tgAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGCATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCa < 2:1195739/140‑1 (MQ=255) tgAAAATATTCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCa < 2:1578042/140‑1 (MQ=255) ttCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGa < 1:1985190/140‑1 (MQ=255) ttCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGa > 1:2642753/1‑140 (MQ=255) ttCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGa > 1:4183636/1‑140 (MQ=255) ttCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGGTGa > 2:401345/1‑140 (MQ=255) tCATACCAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATAGCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGaa < 1:4347805/140‑1 (MQ=255) ccAACCTCAATGCATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACACATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGc < 1:272154/140‑1 (MQ=255) cAACCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCt > 1:3681060/1‑140 (MQ=255) aCCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCg > 2:1098125/1‑140 (MQ=255) aCCTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCg < 2:3250215/140‑1 (MQ=255) ccTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGc > 1:3405631/1‑140 (MQ=255) cTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCt < 1:4728095/140‑1 (MQ=255) cTCAATGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCt < 1:330657/140‑1 (MQ=255) aaTGGATATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTtg > 1:3474175/1‑140 (MQ=255) atcc‑TTTCAGTTACCCGGCATACTCGGGCGGCTAATTCACAAATCTATGCGCGATTGCCGGATGTTCTTGTATATCGTCCATCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATc > 2:766453/4‑140 (MQ=255) atcc‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTAcg < 2:73541/95‑1 (MQ=255) atcc‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATc < 2:3211162/137‑1 (MQ=255) atcc‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATc > 1:4625560/4‑140 (MQ=255) atcc‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTGGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATc > 1:4902236/4‑140 (MQ=255) atcc‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCACCCAGATTCCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGATCTCGCTTTGTGCAATc > 1:965375/4‑140 (MQ=255) atcc‑TTTCAGTAACCCGGAATAACCGGGCCGATAATTCACAAATCTGCGCGCGAATGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGATGGAGCTCGCTTTATGCAATc > 2:2581394/4‑140 (MQ=255) tcc‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTGTGTCGACACCTAATATTACCCCTACCTCGTTTTGTTGCAGCCACTCAACGATCTCGCTTTGTGCAATCg < 2:2435901/138‑1 (MQ=255) c‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCa < 2:4975732/140‑1 (MQ=255) ttCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGGCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAAGCGCAtt > 2:4187987/1‑140 (MQ=255) ttCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCAtt > 1:2861006/1‑140 (MQ=255) ttCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCAtt > 1:1112763/1‑140 (MQ=255) cAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATtct > 2:4603733/1‑140 (MQ=255) cAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATtct > 1:626267/1‑140 (MQ=255) cAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATtct > 2:2834157/1‑140 (MQ=255) cAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATtct > 2:4851021/1‑140 (MQ=255) tAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTcac > 1:351321/1‑140 (MQ=255) aCCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACAt > 2:925717/1‑140 (MQ=255) aCCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACAt > 1:1643936/1‑140 (MQ=255) cccGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACAtt > 1:2895161/1‑140 (MQ=255) cccGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACAtt < 2:841495/140‑1 (MQ=255) cccGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACAtt > 1:4131960/1‑140 (MQ=255) aaTACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACATTGAGaa > 1:4792841/1‑140 (MQ=255) cccGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACATTGAGAAAAAc < 2:4166516/140‑1 (MQ=255) cccGGGCCGCTAATCCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACATTGAGAAAAAc < 2:3079629/140‑1 (MQ=255) ccGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACATTGAGAAAAACg > 2:5005101/1‑140 (MQ=255) cGGGCCGCTAATTCACAAATCTGCGCGCGATGGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTGGAAGGAGCTGGCTTTGTGCAATCGCGTTCTCACATTGAGAAAAACgg > 2:4754447/1‑140 (MQ=255) gCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACATTGAGAAAAACGGTTa < 1:5082831/140‑1 (MQ=255) gCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACATTGAGAAAAACGGTTa > 1:2815316/1‑140 (MQ=255) ccGCTAATTCACAAATCTGCGCGCGAGTACAGGATGTTCTGGTATATCGCCCAGCCAGAGGGCCTCTACGTCGTGTTGTTGCGGCGGTTGAAGGAGCGCGCTTTGGGCAATCGCATTCTGACATTGAGAAAAAGGGTGaa > 2:115385/1‑140 (MQ=255) | GGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATAT‑C‑TTTCAGTAACCCGGAATACCCGGGCCGTTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACATTGAGAAAAACGGTTAA > NZ_CP025268/3016455‑3016727 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |