BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	3,070,477	T→C	212 (TAA→TAG)	argO ←	arginine exporter ArgO

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	3,070,477	0	T	C	99.5%	1206.3 / NA	365	212 (TAA→TAG)	argO	arginine exporter ArgO
Reads supporting (aligned to +/- strand): ref base T (1/0); major base C (125/237); minor base G (0/2); total (126/239)
Fisher's exact test for biased strand distribution p-value = 5.48e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 365 total aligned reads displayed.

CTAATACCCATTAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCTTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGACGCGGTGCCAGCCAGGC  >  NZ_CP025268/3070341‑3070611

  aaTACCCATTAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACt                                                                                                                                   >  2:4967694/1‑140 (MQ=255)

     aCCCATTAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGaa                                                                                                                                <  1:3452121/140‑1 (MQ=255)

     aCCCATTAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGaa                                                                                                                                >  1:411438/1‑140 (MQ=255)

       ccATTAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACa                                                                                                                              >  1:4057429/1‑140 (MQ=255)

       ccATTAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACa                                                                                                                              <  1:208403/140‑1 (MQ=255)

        cATTAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACaa                                                                                                                             <  2:1747808/140‑1 (MQ=255)

         aTTAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAg                                                                                                                            >  2:2534720/1‑140 (MQ=255)

         aTTAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAg                                                                                                                            >  1:663259/1‑140 (MQ=255)

          ttAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAgg                                                                                                                           >  1:709373/1‑140 (MQ=255)

           tAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGc                                                                                                                          <  1:3152025/140‑1 (MQ=255)

           tAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGc                                                                                                                          <  1:1539797/140‑1 (MQ=255)

           tAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGc                                                                                                                          <  2:4729491/140‑1 (MQ=255)

             aTGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCtt                                                                                                                        <  1:3846805/140‑1 (MQ=255)

               gccgccAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTtgt                                                                                                                      >  2:3224897/1‑140 (MQ=255)

                 cgccAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGc                                                                                                                    <  1:2136249/140‑1 (MQ=255)

                 cgccAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGc                                                                                                                    <  2:3825145/140‑1 (MQ=255)

                 cgccAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGc                                                                                                                    <  1:2815338/140‑1 (MQ=255)

                 cgccAGGGCGATAACTTTGAACTTCACGGTAGTCTCGCCGGGTTAATTGACGTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGGCTGTGTTTTATTTTTCCATCAGACAGCGCCTAACGGAACAAGGCTTTTGc                                                                                                                    >  2:1252017/1‑140 (MQ=255)

                 cgccAGGGCGATAACTATGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAACATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTCATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGc                                                                                                                    <  1:2829934/140‑1 (MQ=255)

                  gccAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCa                                                                                                                   >  1:2679437/1‑140 (MQ=255)

                   ccAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCAt                                                                                                                  <  1:1194653/140‑1 (MQ=255)

                   ccAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCAt                                                                                                                  >  1:1866368/1‑140 (MQ=255)

                   ccAGGGCGATAACTTTGAACTTCACGTTAGGCTCCCCGTGTTAATTGACTTGCCCAAAATTAAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAAAAAGGCTTGTGCAt                                                                                                                  >  2:2756754/1‑140 (MQ=255)

                   ccAGGGCGATAACTTTGAACTTCACATTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGCACTCTGGAGGCCAGCTTAGCGCATCTGTTTTATTTTTCCATCAGATAGCGCCTACATGAAAAAGGCTTGTGCAt                                                                                                                  <  2:4031172/140‑1 (MQ=255)

                           ttAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATa                                                                                                          >  2:4220835/2‑140 (MQ=255)

                            tAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATAc                                                                                                         >  1:732331/1‑140 (MQ=255)

                            tAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATAc                                                                                                         >  2:3360659/1‑140 (MQ=255)

                                 ttGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGtct                                                                                                    <  2:1801147/140‑1 (MQ=255)

                                  tGAACTTCACGTTAGTCTCTCCGGGTTAATTGACTTGCCCAAAATTCAGGAGCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATAACGtctc                                                                                                   >  2:2263323/1‑140 (MQ=255)

                                       ttCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGcc                                                                                              <  1:3266254/140‑1 (MQ=255)

                                       ttCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGcc                                                                                              <  2:4628141/140‑1 (MQ=255)

                                         cACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAg                                                                                            >  1:46657/1‑140 (MQ=255)

                                         cACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAg                                                                                            >  1:481251/1‑140 (MQ=255)

                                         cACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTATGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGAGCATGAGCAATACCGTCTCTCGCCAg                                                                                            >  2:2388603/1‑140 (MQ=255)

                                         aaCGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTATGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAg                                                                                            >  2:1532842/2‑140 (MQ=255)

                                                 tctctcCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAgg                                                                                    >  1:2437124/1‑140 (MQ=255)

                                                 tctctcCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAgg                                                                                    >  1:1730962/1‑140 (MQ=255)

                                                   tctcCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCa                                                                                  >  2:2863490/1‑140 (MQ=255)

                                                     tcCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAAt                                                                                <  1:853161/140‑1 (MQ=255)

                                                      ccGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTGACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATa                                                                               >  2:3720496/1‑140 (MQ=255)

                                                      ccGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATa                                                                               >  1:4549084/1‑140 (MQ=255)

                                                      ccGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATa                                                                               <  2:556568/140‑1 (MQ=255)

                                                        gtgtTAATTGACTTGCCCAAAATTCAGGCCCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGGCTCTCGCCAGCTGCAAGGCAATaaa                                                                             <  2:925147/140‑1 (MQ=255)

                                                        gtgtTAATTGACTTGCCCAAAATTCAGGATTTATGGAGTCAATCTTAGCCCCTGTGTTTTATTTTCCGATCAGATAGCGCCTAAATGAACAAGGCTTGTGCATGAGCAAGACCGTCTCTCGCCAGCTGCAAGGGAATaaa                                                                             <  2:303259/140‑1 (MQ=255)

                                                        gtgtTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATaaa                                                                             <  1:1263099/140‑1 (MQ=255)

                                                        gcgtTAAGTGAGTTGCCCGATATTCAGGACCTCTGGAGGCAAGCTTCGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAAGTGCCCCAGGCTTGTGCATGAGCAACACCGTCTCTCGCCAGCTGCGAGGCAATcaa                                                                             <  2:2287949/138‑1 (MQ=255)

                                                             aaTTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGc                                                                                                                    >  1:1118480/1‑96 (MQ=255)

                                                             aaTTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGc                                                                                                                    <  2:1118480/96‑1 (MQ=255)

                                                             aaTTGACTTGCCCAAAATCCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTTAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACcaca                                                                        <  2:3628913/140‑1 (MQ=255)

                                                               ttGACTTGCACAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCCGTTTTATTCTTCCATCAGATAGCGCCTAACTGAACGAGGCTTGTGCAGGCGCAATACCGTCTCTCGCCCGCTGCAAGGCAATAAACCACATa                                                                      >  2:445302/1‑140 (MQ=255)

                                                                cgcattGCCCAAAATGCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGCTAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACAGTCTCTCGCCAGCTGCAAGGCAATAAACCACATaa                                                                     <  2:1049748/136‑1 (MQ=255)

                                                                  aCTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAaca                                                                   <  1:4327067/140‑1 (MQ=255)

                                                                   cTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAacac                                                                  <  1:4967694/140‑1 (MQ=255)

                                                                   cTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAacac                                                                  <  1:2992524/140‑1 (MQ=255)

                                                                   cTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAacac                                                                  <  1:2612543/140‑1 (MQ=255)

                                                                    ttGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAAcaca                                                                 >  2:716573/1‑140 (MQ=255)

                                                                     tGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGGTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACAt                                                                >  1:4253931/1‑140 (MQ=255)

                                                                     tGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCGCTCGCCAGCTGCAAGGCAATAAACCACATAACACAt                                                                >  1:5038047/1‑140 (MQ=255)

                                                                         cAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCca                                                            <  1:526183/140‑1 (MQ=255)

                                                                           taaTTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCcaca                                                          <  1:4491395/139‑1 (MQ=255)

                                                                           atcgtCAGGACTATTGGAGGTAAGGTTAGCGCCTCTGTCTTATTTTTCCATCAGTTAGCGCCTCCCTCAACAATGTATAAGCAAAAGCTATAGCGTCACTCGCCAGCTGCAAAGCAATAAACCACATAACACATCCcaca                                                          <  2:3590840/136‑1 (MQ=255)

                                                                             aTTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAAc                                                        <  1:149780/140‑1 (MQ=255)

                                                                             aTTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAAc                                                        <  2:1373017/140‑1 (MQ=255)

                                                                             aTTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAAc                                                        <  2:4982274/140‑1 (MQ=255)

                                                                             aTTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAAc                                                        <  1:796122/140‑1 (MQ=255)

                                                                             aTTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAACACCGTCTCTCGCCAGCTGCAGGGCAATAAACCACATAACACATCCCACAAc                                                        <  1:3061305/140‑1 (MQ=255)

                                                                               tCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCa                                                      <  1:2282044/140‑1 (MQ=255)

                                                                                  ggACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCCATAAACCACATAACACATCCCACAACCAGAt                                                   <  2:3883211/140‑1 (MQ=255)

                                                                                  ggACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGAt                                                   <  1:2464795/140‑1 (MQ=255)

                                                                                  ggACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGAt                                                   <  2:3285412/140‑1 (MQ=255)

                                                                                      ctctGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGAt                                               >  1:3204485/1‑140 (MQ=255)

                                                                                       tctGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATa                                              <  1:4400931/140‑1 (MQ=255)

                                                                                        ctGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATaa                                             >  2:4770475/1‑140 (MQ=255)

                                                                                        ctGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATaa                                             >  1:4199952/1‑140 (MQ=255)

                                                                                        ctGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATGGATaa                                             >  2:4479210/1‑140 (MQ=255)

                                                                                             ggCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATgcgc                                        <  1:967652/140‑1 (MQ=255)

                                                                                             ggCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATgcgc                                        <  2:313154/140‑1 (MQ=255)

                                                                                             ggCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATgcgc                                        <  2:1313520/140‑1 (MQ=255)

                                                                                             ggCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATgcgc                                        <  1:1623222/140‑1 (MQ=255)

                                                                                             ggCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATgcgc                                        <  2:788520/140‑1 (MQ=255)

                                                                                               cAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCtg                                      <  1:493229/140‑1 (MQ=255)

                                                                                               cAAGCTTAGCCCCTCTGTGTTATTTTTCCATCAAGTAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCtg                                      <  2:1498271/140‑1 (MQ=255)

                                                                                                   cTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCt                                  >  2:1793629/1‑140 (MQ=255)

                                                                                                   cTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCt                                  >  1:2964092/1‑140 (MQ=255)

                                                                                                    ttATCGCCTCTGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCtt                                 <  2:2461999/140‑1 (MQ=255)

                                                                                                            tctGTTTTATTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTg                         >  1:3729221/1‑140 (MQ=255)

                                                                                                                    attctaccATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGAcg                 <  1:3898219/134‑1 (MQ=255)

                                                                                                                    aTTTTTCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGAcg                 <  1:4461825/140‑1 (MQ=255)

                                                                                                                    aTTTTTCCAGCCGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCCCCAGCTGCAAGGCAATAAACCACATAACACGTCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGAcg                 <  2:4841331/140‑1 (MQ=255)

                                                                                                                    aTTTTCCAATCAGATAGCGCGTGACTGAACAGGGCTTGGGCATGATCAATACCGTCTCTCGCCAGCTGCAAGGCAATAACCCTCATCGCACATCCCACAGCCAGATTGATAATGCGCTGTGCTTTTGCGGTGTGAAGAcg                 <  2:1938981/140‑1 (MQ=255)

                                                                                                                     tttttCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGAcgc                <  2:4394463/140‑1 (MQ=255)

                                                                                                                        ttCCATCGGCTGGCGCGTAAATGAACAAGGCTTGCGCATGAGCAATGCCGGCTCTCGCCAGCTGCAAGGCAATAAACCACCTCACAAATCCCACACCCAGATTGATAATCCCACGTGCTTTTGCCGTGCGCAGACGCGGt             <  2:2604686/140‑1 (MQ=255)

                                                                                                                        ttCCATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGACGCGGt             <  1:1793031/140‑1 (MQ=255)

                                                                                                                          ccATCAGATAGCGCCTCACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGACGCGGTgc           >  2:3414520/1‑140 (MQ=255)

                                                                                                                          ccATCAGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGACGCGGTgc           <  1:1052810/140‑1 (MQ=255)

                                                                                                                              cAGATAGCGCCTAACTTAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGACGCGGTgccagc       <  2:2110557/140‑1 (MQ=255)

                                                                                                                               aGATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGACGCGGTtccagcc      <  2:2021202/140‑1 (MQ=255)

                                                                                                                               aGATAGAGACTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGACGCGGTgccagcc      <  1:3378061/140‑1 (MQ=255)

                                                                                                                                gATAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGACGCGGTgccagcca     <  2:4151344/140‑1 (MQ=255)

                                                                                                                                 aTAGCGCCTAACTGAACAAGGCTTGTGCATGAGCAATGCCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGACGCGGTGccagccag    <  1:4007344/140‑1 (MQ=255)

CTAATACCCATTAATGCCGCCAGGGCGATAACTTTGAACTTCACGTTAGTCTCTCCGTGTTAATTGACTTGCCCAAAATTCAGGACCTCTGGAGGCAAGCTTAGCGCCTCTGTTTTATTTTTCCATCAGATAGCGCTTAACTGAACAAGGCTTGTGCATGAGCAATACCGTCTCTCGCCAGCTGCAAGGCAATAAACCACATAACACATCCCACAACCAGATTGATAATGCGCTGTGCTTTTGCCGTGCGCAGACGCGGTGCCAGCCAGGC  >  NZ_CP025268/3070341‑3070611

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`