Predicted mutation
evidence seq id position mutation annotation gene description
RA NZ_CP025268 322,406 T→C S340P (TCA→CCA)  ykgF → LutB/LldF family L‑lactate oxidation iron‑sulfur protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP025268322,4060TC98.7% 1023.3 / ‑5.5 318S340P (TCA→CCA) ykgFLutB/LldF family L‑lactate oxidation iron‑sulfur protein
Reads supporting (aligned to +/- strand):  ref base T (1/0);  major base C (166/147);  minor base A (3/1);  total (170/148)
Fisher's exact test for biased strand distribution p-value = 6.26e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 318 total aligned reads displayed.

CGATAACGGGCGTTCTGAGGTGCTGGCCTCTGAATTTCGGGATGTGCTGCGCTGTATTCGCTGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGTCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGCACAGCTTGTGACAACGTGTGTCCGGTGCGTATTCCGCTGTCAAAACTGATTTTGCGTCA  >  NZ_CP025268/322270‑322542
                                                                                                                                        |                                                                                                                                        
  aTAACGGGCGTTCTGAGGTGCTGGCCTCTGAATTTCGGGATGTGCTGCGCTGTATTCGCTGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAAtt                                                                                                                                     >  1:3120959/1‑140 (MQ=255)
         gCGTTCTGAGGTGCTGGCCTCTGAATTTCGGGATGTGCTGCGCTGTATTCGCTGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCgg                                                                                                                              >  2:2699007/1‑140 (MQ=255)
             tCTGAGGTGCTGGCCTCTGAATTTCGGGATGTGCTGCGCTGTATTCGCTGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGAt                                                                                                                          <  1:248643/140‑1 (MQ=255)
             tCTGAGGTGCTGACCTCTGAATTACGGCATGTGCTGCGCTGTATTCGCTGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATCTTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGAt                                                                                                                          <  2:1380619/140‑1 (MQ=255)
                   gTGCTGGCCTCTGAATTTCGGGATGTGCTGCGCTGTATTCGCTGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTcc                                                                                                                    >  1:4972284/1‑140 (MQ=255)
                   gTGCTGGCCTCTGAATTTCGGGATGTGCTGCGCTGTATTCGCTGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCGCTATTTATCCAGGGCCAGTTGGTGCGGTGGTGTCTcc                                                                                                                    >  1:893801/1‑140 (MQ=255)
                    tGCTGGCCTCTGAATTTCGGGATGTGCTGCGCTGTATTCGCTGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCg                                                                                                                   <  2:4423335/140‑1 (MQ=255)
                      cTGGCCTCTGAATTTCGGGATGTGCTGCGCTGTCTTCGCTGCGGGGCTTGTATGAATACTTGTCCTGCATACCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCt                                                                                                                 >  2:4705570/1‑140 (MQ=255)
                      cTGGCCTCTGAATTTCGGGATGTGCTGCGCTGTATTCGCTGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTTGTGCGGTGATTTCTCCGCt                                                                                                                 >  2:913296/1‑140 (MQ=255)
                      cTGGCCTCTGAATTTCGGGATGTGCTGCGCTGTATTCGCTGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCt                                                                                                                 >  1:3882373/1‑140 (MQ=255)
                      cTGGCCTCTGAATTTCGGGATGTGCTGCGCTGTATTCGCTGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCt                                                                                                                 >  1:1132730/1‑140 (MQ=255)
                         gCCTCTGAATTTCGGGATGTGCTGCGCTGTATTCGCTGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGGGATTTCTCCGCTACt                                                                                                              >  2:3444684/1‑140 (MQ=255)
                            tctGAATTTCGGGATGTGCTGCGCTGTATTCGCTGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTgg                                                                                                           <  1:545353/140‑1 (MQ=255)
                             ctGAACTGCGGGATGTGCTGCGCTGTCTTCGGTGCGGGGCTTGTATGAATACTTGTCTGGCAGATCGCCATATTGCCGGTCATGGATATGGCTGTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTggc                                                                                                          <  2:4488115/140‑1 (MQ=255)
                                   ttCGGGATGTGCTGCGCTGTATTCGCTGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGatat                                                                                                    >  1:3788267/1‑140 (MQ=255)
                                    tCGGGATGTGCTGCGCTGTATTCGCTGCTGGGCTTGTATGAATACTGGTCCGGCATATCGTCATATTGGACGTCATGCATATGGCTCTATTTATCCAGGGACAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCtata                                                                                                   <  2:497689/140‑1 (MQ=255)
                                     cGGGATGTGCTGCGCTGTATTCGCTGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTAtaa                                                                                                  >  2:4148459/1‑140 (MQ=255)
                                     cGGGATGTGCTGCGCTGTATTCGCTGCGGGGCTTGTATGAATAATTGTCCGGCATATCGACATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGACAATTGGTGCGGTGATATCTCCGATACTTGGCGGCTAtaa                                                                                                  >  2:1964206/1‑140 (MQ=255)
                                      gggATGTGCTGCGCTGTATTCGCTGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTAtaaa                                                                                                 >  2:3992234/1‑140 (MQ=255)
                                             gctgcGCTGTATTCGCTGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTAtaaagatttta                                                                                          <  1:4574677/140‑1 (MQ=255)
                                             gctgcGCTGTATTCGCTGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTAtaaagatttta                                                                                          <  2:4678048/140‑1 (MQ=255)
                                             gctgcGCTGTATTCGCTGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTAtaaagatttta                                                                                          <  1:3590097/140‑1 (MQ=255)
                                                   cTGTATTCTCTGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCACTCATGGATATGGCTCTATTTATCCAGGGCCAATTTGTGCGGTGATTTCTCCGCTACTTGGCGGCTAtaaagattttaaagatt                                                                                    <  2:3725370/140‑1 (MQ=255)
                                                   cTGTATTCGCTGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTAtaaagattttaaagatt                                                                                    <  1:1220168/140‑1 (MQ=255)
                                                   cTGTATTCGCTGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTAtaaagattttaaagatt                                                                                    <  1:2012404/140‑1 (MQ=255)
                                                   cTGTATTCGCTGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTAtaaagattttaaagatt                                                                                    <  1:2123893/140‑1 (MQ=255)
                                                   cTGTATTCGCTGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTAtaaagattttaaagatt                                                                                    <  1:280857/140‑1 (MQ=255)
                                                   cTGTATTCGCTGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTAtaaagattttaaagatt                                                                                    <  1:2695758/140‑1 (MQ=255)
                                                      tATTCGCTGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTAc                                                                                 >  2:3823310/1‑140 (MQ=255)
                                                      tATTCGCTGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTAc                                                                                 >  2:3401450/1‑140 (MQ=255)
                                                        ttCGCTGGGGGGCTTGTATGAATACTTGTCCGGCATATCGCAATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTAcac                                                                               <  1:162501/140‑3 (MQ=255)
                                                        ttCGCTGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTAccc                                                                               <  2:2603369/140‑1 (MQ=255)
                                                        ttCGCTGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTAccc                                                                               >  2:1614123/1‑140 (MQ=255)
                                                        ttCGCTGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTAccc                                                                               <  1:2348145/140‑1 (MQ=255)
                                                        ttCGCTGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTAccc                                                                               <  2:488322/140‑1 (MQ=255)
                                                          cGCTGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTa                                                                             <  1:651805/140‑1 (MQ=255)
                                                           gCTGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTAc                                                                            >  1:3197511/1‑140 (MQ=255)
                                                             tGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGc                                                                          >  1:4671961/1‑140 (MQ=255)
                                                             tGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGc                                                                          >  1:1074726/1‑140 (MQ=255)
                                                             tGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGc                                                                          >  1:3163614/1‑140 (MQ=255)
                                                              gCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGcc                                                                         >  2:4243448/1‑140 (MQ=255)
                                                                ggggCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCGAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTg                                                                       >  2:120397/1‑140 (MQ=255)
                                                                ggggCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTg                                                                       >  2:2365641/1‑140 (MQ=255)
                                                                ggggCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTg                                                                       >  1:4397259/1‑140 (MQ=255)
                                                                ggggCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATGTTAAAGATTTACCCTACGCCTg                                                                       >  2:1742465/1‑140 (MQ=255)
                                                                ggggCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGAAATGGCTCTATTTATCCAGGGCCCATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTg                                                                       >  2:3215498/1‑140 (MQ=255)
                                                                 gggCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTGTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGc                                                                      <  2:58455/140‑1 (MQ=255)
                                                                 gggCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGc                                                                      <  1:1770205/140‑1 (MQ=255)
                                                                 gggCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGc                                                                      <  2:4841327/140‑1 (MQ=255)
                                                                 gggCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGc                                                                      <  2:2197952/140‑1 (MQ=255)
                                                                 gggCTTGTATGAAGACTTGGCCGGCATATCGCCATATTGGCGGTAATGGATATGGCTCTATTTATCCAGGGCCAATTGGGGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTGCGCCTGc                                                                      <  2:3832749/140‑1 (MQ=255)
                                                                  ggCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGct                                                                     >  2:4565103/1‑140 (MQ=255)
                                                                   gCTTGTATGAATACTTTTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCCACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGctc                                                                    <  1:4363821/140‑1 (MQ=255)
                                                                    cTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGctct                                                                   <  2:3324050/140‑1 (MQ=255)
                                                                         aTGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATg                                                              <  1:622750/140‑1 (MQ=255)
                                                                         aTGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATCTAACCACGGCCAATTTGTGCGGTCATTGCCACGCTCCGTGGCGGCTATAAAGATTTCAAAGGTTTATCCTACGTCTGCTCTGTATg                                                              <  2:5037674/140‑1 (MQ=255)
                                                                           gactACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGca                                                            <  2:776911/137‑1 (MQ=255)
                                                                           gactACTTGTCAGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCCGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGca                                                            <  2:525171/137‑1 (MQ=255)
                                                                           gAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAACGATTTACCCTACGCCTGCTCTTTATGca                                                            <  1:3412219/140‑1 (MQ=255)
                                                                           gAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGca                                                            <  1:4756808/140‑1 (MQ=255)
                                                                           gAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGca                                                            <  1:2622677/140‑1 (MQ=255)
                                                                           gAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGca                                                            <  2:3030634/140‑1 (MQ=255)
                                                                                  tGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTAccc                                                                               <  1:128115/114‑1 (MQ=255)
                                                                                  tGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTAccc                                                                               >  2:128115/1‑114 (MQ=255)
                                                                                  tGTCCGGCATATCGCCAGATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATGGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGCACAGCTtg                                                     >  2:3906985/1‑140 (MQ=255)
                                                                                     ccGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGCACAGCTTGTGa                                                  <  1:4685047/140‑1 (MQ=255)
                                                                                      cGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGCACAGCTTGTGAc                                                 <  2:4986533/140‑1 (MQ=255)
                                                                                        gCATATCGCCATATTGGCGGTCATGGATATTGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGCACAGCTTGTGACaa                                               <  2:2438699/140‑1 (MQ=255)
                                                                                        gCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGCACAGCTTGTGACaa                                               <  1:3709901/140‑1 (MQ=255)
                                                                                        gCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGCACAGCTTGTGACaa                                               <  2:4339222/140‑1 (MQ=255)
                                                                                           tatCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGCACAGCTTGTGACAACgt                                            <  1:841055/140‑1 (MQ=255)
                                                                                           tatCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGCACAGCTTGTGACAACgt                                            <  2:1456641/140‑1 (MQ=255)
                                                                                              cGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGCACAGCTTGTGACAACgtgtg                                         >  2:410435/1‑140 (MQ=255)
                                                                                               gCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGCACAGCTTGTGACAACgtgtgt                                        <  2:3559994/140‑1 (MQ=255)
                                                                                                ccATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGCACAGCTTGTGACAACGTGTGTc                                       <  1:1026197/140‑1 (MQ=255)
                                                                                                 cATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGCACAGCTTGTGACAACGTGTGTcc                                      <  2:2130318/140‑1 (MQ=255)
                                                                                                   tatTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGCACAGCTTGTGACAACGTGTGTCCgg                                    >  1:2877650/1‑140 (MQ=255)
                                                                                                         cGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCAGTGCTTCCTCCGCTACTTGGCGGCGATAAAGATTTTAAAGATTTAACCTACGCCTGCTCTTTATGCACAGTTTGTGACAACGTGTGTCCGGTGCGTa                              <  1:3049423/140‑1 (MQ=255)
                                                                                                           gTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGCACAGCTTGTGACAACGTGTGTCCGGTGCGTAtt                            >  2:3675697/1‑140 (MQ=255)
                                                                                                             cATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGCACAGCTTGTGACAACGTGTGTCCGGTGCGTATTcc                          >  1:4943330/1‑140 (MQ=255)
                                                                                                              aTGGATATGTCTCTATTTATCCAGGGCCAAGTGGTGCGGTGATTTCTGCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTGTATGCACAGCTTGTGACAACGTGTGTCCGGTGCGTATTCCg                         >  2:292026/1‑140 (MQ=255)
                                                                                                               tGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGCACAGCTTGTGACAACGTGTGTCCGGTGCGTATTCCGc                        <  2:2785027/140‑1 (MQ=255)
                                                                                                                      ggCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGCACAGCTTGTGACAACGTGTGTCCGGTGCGTATTCCGCTGTCaaa                 >  1:1850437/1‑140 (MQ=255)
                                                                                                                      ggCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGCACAGCTTGTGACAACGTGTGTCCGGTGCGTATTCCGCTGTCaaa                 >  1:407616/1‑140 (MQ=255)
                                                                                                                      ggCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGCACAGCTTGTGACAACGTGTGTCCGGTGCGTATTCCGCTGTCaaa                 >  1:3919212/1‑140 (MQ=255)
                                                                                                                      ggCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGCACAGCTTGTGACAACGTGTGTCCGGTGCGTATTCCGCTGTCaaa                 >  1:4159268/1‑140 (MQ=255)
                                                                                                                      ggCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGCACAGCTTGTGACAACGTGTGTCCGGTGCGTATTCCGCTGTCaaa                 >  1:4634890/1‑140 (MQ=255)
                                                                                                                      ggCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGCACAGCTTGTGACAACGTGTGTCCGGTGCGTATTCCGCTGTCaaa                 >  2:184358/1‑140 (MQ=255)
                                                                                                                      ggCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGCACAGCTTGTGACAACGTGTGTCCGGCGCGTATTCCGCTGTCaaa                 >  2:4636659/1‑140 (MQ=255)
                                                                                                                      ggCTCTATTTATCCAGGGCCAAGTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGCACAGCTTGTGACAACGTGTGTCCGGTGCGTATTCCGCTGTCaaa                 >  1:2407836/1‑140 (MQ=255)
                                                                                                                       gCTATATTTATCCACGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGCACAGCTTGTGACAACGTGTGTCCGGTGCGTATTCCGCTGTCaaaa                <  1:3645253/140‑1 (MQ=255)
                                                                                                                           tATTTGTCCAGGGCCAATTGGTGCGGTGATTTCTCGGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGCACAGCTTGTGACAACGTGTGTCCGGTGCGAATTACGCTTCCAAAACTGa            >  2:2575748/1‑140 (MQ=255)
                                                                                                                           tATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGCACAGCTTGTGACAACGTGTGTCCGGTGCGTATTCCGCTGTCAAAACTGa            >  1:2560460/1‑140 (MQ=255)
                                                                                                                                  ccAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATACAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGCACAGCTTGTGACAACGTGTGTCCGGTGCGTATTCCGCTGTAAAAACTGATTTTGCg     <  1:4265001/140‑1 (MQ=255)
                                                                                                                                  ccAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGCACAGCTTGTGACAACGTGTGTCCGGTGCGTATTCCGCTGTCAAAACTGATTTTGCg     >  2:3093469/1‑140 (MQ=255)
                                                                                                                                  ccAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGCACAGCTTGTGACAACGTGTGTCCGGTGCGTATTCCGCTGTCAAAACTGATTTTGCg     >  2:1489772/1‑140 (MQ=255)
                                                                                                                                  ccAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGCACAGCTTGTGACAACGTGTGTCCGGTGCGTATTCCGCTGTCAAAACTGATTTTGCg     >  1:1421164/1‑140 (MQ=255)
                                                                                                                                    aGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGCACAGCTTGTGACAACGTGTGTCCGGTGCGTATTCCGCTGTCAAAACTGATTTTGCGTc   <  2:4361122/140‑1 (MQ=255)
                                                                                                                                    aGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGCACAGCTTGTGACAACGTGTGTCCGGTGCGTATTCCGCTGTCAAAACTGATTTTGCGTc   <  2:2078200/140‑1 (MQ=255)
                                                                                                                                    aGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGCACAGCTTGTGACAACGTGTGTCCGGTGCGTATTCCGCTGTCAAAACTGATTTTGCGTc   <  2:1074726/140‑1 (MQ=255)
                                                                                                                                        |                                                                                                                                        
CGATAACGGGCGTTCTGAGGTGCTGGCCTCTGAATTTCGGGATGTGCTGCGCTGTATTCGCTGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGTCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGCACAGCTTGTGACAACGTGTGTCCGGTGCGTATTCCGCTGTCAAAACTGATTTTGCGTCA  >  NZ_CP025268/322270‑322542

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: