| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,910,433 | G→A | intergenic (‑148/+35) | pstB ← / ← pstA | phosphate ABC transporter ATP‑binding protein PstB/phosphate ABC transporter permease PstA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,910,433 | 0 | G | A | 98.8% | 1290.1 / NA | 411 | intergenic (‑148/+35) | pstB/pstA | phosphate ABC transporter ATP‑binding protein PstB/phosphate ABC transporter permease PstA |
| Reads supporting (aligned to +/- strand): ref base G (1/4); new base A (181/218); total (185/226) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.84e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 419 total aligned reads displayed.
TCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGG‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTC > NZ_CP025268/3910296‑3910572 | tCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAga‑gg > 1:4259867/1‑140 (MQ=255) gcgtCGTGCTTGATGCACTTCGCTAAGCAGGCTTACCGTAGGCCGGATCAGGCGTTAACTCCGCATCCGGCAAAGGGTTAACCGTGTTCGGAGTCAAAAAGGCTCTCGGTCGGTCCCCTCGCCCCTCTTGGTAGA‑GGGtg < 2:648921/137‑2 (MQ=255) gTGCCTGATGCACTTCGCTAATCCGGCTTACCGGCGGCCGGATCAGGCGGTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGCCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGt < 2:3880433/140‑1 (MQ=255) gTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGt < 2:360533/140‑1 (MQ=255) ccTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAg > 1:4490486/1‑140 (MQ=255) aTGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGt > 1:3187891/1‑127 (MQ=255) ttCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCg > 2:1110504/1‑140 (MQ=255) tggcaaaTCCGTCTTACCGTAGGCCGGATCGGGCGTTCACGCCGCATCCGGCCAGGCGTTAGCCGTGTACAGAGTCAAAACGGCGCCCGGCGGGTCCCCCCGCCCCGCTGGGGAGA‑GGGTTAGGGTGGGGGGAAAACCgt < 2:1538894/135‑1 (MQ=25) tCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCgt > 1:857270/1‑140 (MQ=255) cGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCgtg > 2:1206044/1‑140 (MQ=255) cGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCgtg > 1:1271746/1‑140 (MQ=255) gCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCgtgt < 1:4338574/140‑1 (MQ=255) aTCAGGCTTACCGTAGGCCGGATCAGGCGTTCCCGCCGCATCCGGCAAAGTGTTAATCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGc < 1:4570015/140‑1 (MQ=255) aTCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCTGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGc < 1:4651058/140‑1 (MQ=255) gCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAatat > 1:3560262/1‑140 (MQ=255) gCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAatat > 1:1484885/1‑140 (MQ=255) gCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAatat > 1:4534275/1‑140 (MQ=255) gCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAatat > 2:1992081/1‑140 (MQ=255) ttgccGTAGTCGGGATCAGGTGTTCACGTCTCTTCCGGTAAAGTGTTTACCGGGAAGAGGGTCATAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGGTAGGGTGATGGGAAAACCGTGTGAGGAGTATCa > 2:4555051/4‑140 (MQ=16) ccggtgggCCGGACCACGGGTTCACGGCGCATCCGGCAAGCTGTTAACCGTCGACAGAGTCAAAAAGGCGCTCGGTAGGCCCCCGCGCCCCTTTGGGGAGA‑GGGTTAGGGTGAGGGAAAAACCGTGTCAGCAATATCAAc < 1:2571101/134‑1 (MQ=25) cccGTAGGCCGGCGCGGGGGTTCAGGCCGCTGCGGGCAAAGTGGTAACGGTGGGCGGAGGCAAAAAGGCGCTCGGTCGGGCCCCTCGCCCCTCGGGGGAGA‑GGGTTGGGTTGAGGGGAAAACCGTGTCAGCGATATCAAc < 2:5005336/139‑1 (MQ=255) aCCGTAGCCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCGCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAAc < 2:538923/140‑1 (MQ=255) gATCAGGCGTTCCAGCCGGATCCGGAAAAGTGTTACCCGTGTCCAGAGTCAAAAAGGCGCTCGGTGGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTAttc < 2:2158211/140‑1 (MQ=37) gATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTAttc > 2:1663313/1‑140 (MQ=255) gATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTAttc < 2:2945273/140‑1 (MQ=255) aTCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTAttct > 1:1074381/1‑140 (MQ=255) aTCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTAttct > 1:1125008/1‑140 (MQ=255) tCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGGGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTTGCaaaaa > 2:2669761/1‑140 (MQ=255) cACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAaac > 2:2563329/1‑140 (MQ=255) ccgcATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAAcg < 1:4888616/140‑1 (MQ=255) cgcATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCAGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGAAATATCAACCGTGTTTATTCTTCGCAAAAACAAcgc > 2:3325691/1‑140 (MQ=255) gcATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAAcgcg < 1:339679/140‑1 (MQ=255) cAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGaa < 1:3131530/140‑1 (MQ=255) cAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGCCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGaa < 2:178738/140‑1 (MQ=255) cAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGCCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGaa < 1:4422392/140‑1 (MQ=255) tgtTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTc < 1:3086117/140‑1 (MQ=255) aaCCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagca < 1:1592247/140‑1 (MQ=255) aaCCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagca < 1:915568/140‑1 (MQ=255) aaCCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagca < 1:3471588/140‑1 (MQ=255) aaCCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagca < 1:124545/140‑1 (MQ=255) ccGTGTACAGAGTCAAAAAGGCGCTCGGTCGGCCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagcagc < 2:2438523/140‑1 (MQ=255) cGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagcagca > 1:662512/1‑140 (MQ=255) gtgtACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagcagcag < 1:1679103/140‑1 (MQ=255) tttACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGt < 2:2213862/138‑1 (MQ=255) tgtACAGAGGCAAAACGGCACTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGCGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCACCAGCAGt < 2:4045351/140‑1 (MQ=38) gtACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTa > 1:1967324/1‑140 (MQ=255) gtACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTa > 2:317076/1‑140 (MQ=255) gtACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTa > 2:4653826/1‑140 (MQ=255) gtACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTa > 1:1383809/1‑140 (MQ=255) gtACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTa > 1:3243397/1‑140 (MQ=255) gtACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTa > 2:1044293/1‑140 (MQ=255) gtACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTa > 1:2440871/1‑140 (MQ=255) gtACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGGGAGGGGAAAACCGTGTCAGCAATATCAACCGTGGTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTa > 1:4127828/1‑140 (MQ=255) gtACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTAAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTa > 2:4223558/1‑140 (MQ=255) gtACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCGGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTa > 1:2257503/1‑140 (MQ=255) gtACAGAGTCAAAAACGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCCGTa > 2:1247230/1‑140 (MQ=255) aggggcAAAAAGCCCCTCGGTCGCGCCCCTCGCCCCGC‑GGGGAGGAGGGTGAGGGTGAGGGCAAAGCCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca < 1:3847945/135‑1 (MQ=255) agcgTCAAAAAGGCGCTCGGTCCGCCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca < 1:2858954/137‑1 (MQ=255) agattgaaaagGGCGCTCGGTCGGTCCCCTCGCCCCTCTTCGGAGT‑GGGTTAGGCTGTGGGAAAAACCGTGTCAGCAATATCATCCGTGTTTAATCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca < 2:4490261/134‑1 (MQ=255) agagcaaaaaaGGAGCTCGGTGGGTCCCCTCGCCCCTCGGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca < 2:2855624/134‑1 (MQ=38) agagTCAACACGGCGCTCGGTCGGTCCCCTCGCCTCTCTGGGGAGA‑GGGTTAGGGACAGGGGAAAATCGTGTCAGCAATATCAACCGTGTTGATTCTTCGCAAAAACAACGCCCGCCAGAATGTTCAGCAGCAGTACGca < 2:3727241/140‑1 (MQ=38) agagTCAAAAAGGCGCTCGGTCTGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca < 2:2492355/140‑1 (MQ=255) agagTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGG‑GGGTTAGGGTGGGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca < 1:3734358/140‑1 (MQ=255) agagTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGTGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca < 2:3706168/140‑1 (MQ=255) agagTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca < 1:3616981/140‑1 (MQ=255) agagTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca < 1:267066/140‑1 (MQ=255) agagTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca < 1:1038948/140‑1 (MQ=255) agagTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca < 2:501246/140‑1 (MQ=255) agagTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca < 2:4915410/140‑1 (MQ=255) agagTCAAAAAGGCGCTCGGTCGGCCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca < 1:4856118/140‑1 (MQ=255) aggaaaaaaGGCGCTCGGGCTGTCCACTCTCCCCCTTGGGGAGA‑GGGTTAGGTTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGcaca < 2:4122883/136‑1 (MQ=255) agTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGcaca > 1:3787841/1‑140 (MQ=255) agTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGcaca < 1:3284608/140‑1 (MQ=255) gTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAg > 2:857446/1‑140 (MQ=255) gTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAg > 1:4759093/1‑140 (MQ=255) gTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGGTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAg > 2:4788388/1‑140 (MQ=255) cAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAggg > 1:3985760/1‑140 (MQ=255) aaaaGGTGGTCGGTCGGGCCCCCCCCCCTTCTGGGCAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAACCAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTa < 2:135020/140‑1 (MQ=255) aaaaGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGCGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAgggga > 2:3240583/1‑138 (MQ=255) aaaaGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGGGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTa < 2:3515014/140‑1 (MQ=255) aaaaGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTa > 2:282177/1‑140 (MQ=255) aaaaGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTa < 1:2734313/140‑1 (MQ=255) aaaaGGCGCTCGGTCGGTCCCCTCCCCCCTCTGGGGAGC‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGAAGCAGTACGCACAGGGTa < 1:2021093/140‑1 (MQ=255) aaGGGGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAAt < 2:3402412/140‑1 (MQ=255) aGGCGCTCCGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGCTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATg < 1:2946401/140‑1 (MQ=255) gcgcTCGGTCGGTCCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGAt > 1:1889994/1‑140 (MQ=255) tcggtcCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATAccc < 1:4958211/140‑1 (MQ=255) tcggtcCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATAccc < 2:2358751/140‑1 (MQ=255) tcggtcCCCTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATAccc < 2:2053858/140‑1 (MQ=255) gtcCCCTCTCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGGACGCACAGGGTAATGATCAATACCCCgg > 2:100593/1‑140 (MQ=255) gtcCCCTCGCCCCGCTGGGGGGA‑GGGTTAGGGTGGGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCgg < 1:1216280/140‑1 (MQ=255) cTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGACAACCGTGTCAGCAACATCAACAGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAg > 2:431545/1‑140 (MQ=255) cTCGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAg > 1:789070/1‑140 (MQ=255) cGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGc > 2:1416466/1‑140 (MQ=255) cGCCCCTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGc > 2:3563596/1‑140 (MQ=255) cccTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCaa > 1:2978490/1‑140 (MQ=255) ccTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAAt > 1:538235/1‑140 (MQ=255) ccTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAAt < 1:2142542/140‑1 (MQ=255) ccTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAAt > 2:5063305/1‑140 (MQ=255) ccTCTGGGGAGA‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAAt > 2:768067/1‑140 (MQ=255) | TCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGG‑GGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTC > NZ_CP025268/3910296‑3910572 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |