| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 374,118 | G→A | intergenic (+186/‑392) | dmpG → / → mhpT | 4‑hydroxy‑2‑oxovalerate aldolase/3‑(3‑hydroxy‑phenyl)propionate transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 374,118 | 0 | G | A | 98.0% | 384.6 / 0.1 | 198 | intergenic (+186/‑392) | dmpG/mhpT | 4‑hydroxy‑2‑oxovalerate aldolase/3‑(3‑hydroxy‑phenyl)propionate transporter |
| Reads supporting (aligned to +/- strand): ref base G (1/3); new base A (81/111); total (82/116) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.41e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.00e-01 | |||||||||||
Only 100 of 199 total aligned reads displayed.
CTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGT‑GGCGCGAGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTT > NZ_CP025268/373979‑374254 | ccGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑gg > 1:2552124/1‑140 (MQ=37) ggATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑Ggcg < 1:1591902/140‑1 (MQ=37) ggATGCGGCGGGAACGCCTTATCCGGCCTACGGATGGCGTGGGAATTTGTAGGCCTGATAGGACGCGTTAGCGTCGCATCAGGCAGCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGT‑Ggcg < 2:3450620/140‑1 (MQ=11) ggAAGCGGCGTGAACGCCTTATCCGGCCGACGGATGGCGGGAGAATTTGTAGGTCTCAGAAGGCGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑Ggcg < 2:4052939/140‑1 (MQ=11) aTGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGcgcg < 1:3581730/140‑1 (MQ=37) aTGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGcgcg < 2:2129418/140‑1 (MQ=21) gggcgTGAGTTCCTTATCCGGTCTACGGAGGGCGTGAGAATTGGTAGGTCTGATAGAGCGCGTTAGCGTCGCATCAGGCATCTGCGCACGAGTGCCGGATGCGGCGTGAACGGCTTATCCGGCCTACGGAT‑GGCGCgcga < 2:3736401/139‑1 (MQ=11) cggcgTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCCCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCggga < 1:1561391/140‑1 (MQ=12) ggcgTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTGATCCGGCCTACGGAT‑GGCGCGGGaa > 2:4615465/1‑140 (MQ=12) ggcgTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGaa > 2:2045807/1‑140 (MQ=255) cgTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAt‑t > 2:1707062/1‑140 (MQ=16) cgTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAt‑t > 1:2930814/1‑140 (MQ=16) cgTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAt‑t > 1:797283/1‑140 (MQ=12) tGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTg < 1:1038165/140‑1 (MQ=16) tGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTg < 2:4141731/140‑1 (MQ=12) gAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGt < 1:2471837/140‑1 (MQ=16) accGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTa < 2:1203289/138‑1 (MQ=9) aCGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGT‑GGCGCGAGAAT‑TTGTAg < 2:2780317/140‑1 (MQ=38) cGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCGTATCCGGCCTACGGAT‑GGCGCGGGAAG‑TTGTAgg > 2:2892407/1‑140 (MQ=255) gCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGT‑GGCGCGAGAAT‑TTGTAGGc < 1:532136/140‑1 (MQ=37) gCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGc < 2:3407007/140‑1 (MQ=12) gCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGc < 2:4323014/140‑1 (MQ=12) cTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCt > 1:1355736/1‑140 (MQ=12) aTCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGAt > 2:114318/1‑140 (MQ=21) aTCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGAt > 1:3291211/1‑140 (MQ=16) aTCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGAt > 1:3458026/1‑140 (MQ=16) tCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATa < 1:3109350/140‑1 (MQ=16) ccGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATaa < 1:916581/140‑1 (MQ=12) ggCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGa < 1:2732035/140‑1 (MQ=16) ggCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGa < 1:1237951/140‑1 (MQ=9) ggCCTACGGAGGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGa < 2:1970472/140‑1 (MQ=9) gCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGAc > 1:2617499/1‑140 (MQ=16) ccTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGAcg > 1:1226214/1‑140 (MQ=16) cTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGAcgc > 1:1991472/1‑140 (MQ=16) cTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGAcgc > 1:1774130/1‑140 (MQ=16) ggATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTa > 1:3130862/1‑140 (MQ=12) ggATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTa > 1:476912/1‑140 (MQ=18) tGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCg < 1:104163/140‑1 (MQ=9) gggCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCg < 1:2127521/139‑1 (MQ=9) ggCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGGACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAAGGAG‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGt < 1:4821632/140‑1 (MQ=11) ggCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGt > 1:1318018/1‑140 (MQ=17) ggCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGt < 1:1715641/140‑1 (MQ=16) ggCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGt < 1:950156/140‑1 (MQ=12) ggCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGt > 2:504174/1‑140 (MQ=16) ggCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGGGAAGGCCTTATCCGGCCTACGGAT‑GGGGCGGGGAT‑TTGTAGGCCTGATAAGACGGGTTGGCGt > 1:2676320/1‑140 (MQ=11) ggCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGGGAACGCCTTCGCCGGCCTACGTAT‑GCCGCGGGCAT‑TTGTAAGCCTGATAAGACTCGTCAGCgg > 2:1639223/1‑139 (MQ=11) gCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTc > 1:2548596/1‑140 (MQ=21) gCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTc > 2:4327460/1‑140 (MQ=16) gCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTc > 1:1921026/1‑140 (MQ=16) cGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCg < 2:3659032/140‑1 (MQ=12) gagaATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCAt > 2:2314783/1‑140 (MQ=18) cTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACggg > 2:2592208/1‑140 (MQ=2) cTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACggg < 1:2193052/140‑1 (MQ=2) ccGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTgg > 2:4049896/1‑140 (MQ=12) ccGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTgg > 2:1241603/1‑140 (MQ=16) ccGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGGCGCAGCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACggggcg > 2:3961907/1‑137 (MQ=11) ggATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGgcg < 2:4857877/140‑1 (MQ=9) ggATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGgcg < 1:3765208/140‑1 (MQ=12) ggATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGgcg < 2:338275/140‑1 (MQ=12) ggATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGgcg < 2:1759231/140‑1 (MQ=16) gATGCGGCGTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGgcgc < 2:883406/140‑1 (MQ=16) aTGCGGCGTGAACGCCTTATCCGTCCTACGGTTCTGTGCTCGGGTCTTGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGgcg < 2:1051578/140‑1 (MQ=11) gcggcgTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTGTCCGGCCTACGGGTGGCGCgag < 1:991723/140‑1 (MQ=255) gcggcgTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCgag < 1:1128611/140‑1 (MQ=16) gcggcgTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCgag < 2:552445/140‑1 (MQ=17) cggcgTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATCAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCgaga < 2:428969/140‑1 (MQ=9) cggcgTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCgaga < 1:4298836/140‑1 (MQ=16) cggcgTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCgaga < 1:4139070/140‑1 (MQ=16) cggcgTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCgaga < 1:4162928/140‑1 (MQ=16) cggcgTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCgaga > 2:3553730/1‑140 (MQ=16) cggcgTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCgaga < 2:2628540/140‑1 (MQ=16) cggcgTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCGGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCgaga < 2:1206103/140‑1 (MQ=12) gcgTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAAt > 1:3766402/1‑140 (MQ=16) cgTGAACGCCTTATCCTGCCTACGGAT‑GGCGCGGGAAG‑TTGTAGGCCTGATAAGACGCGTTAGCGGCGCATCAGGCATCTGCGCACGACTGCCGGATGCTGGATGTACGCCTTATCCGTCCGACTGGTCGCGCGAGGAtt > 2:1603160/1‑140 (MQ=11) cgTGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCTTTATCCGTCCTACGGGTGGCGCGAGAAtt > 2:2075028/1‑140 (MQ=255) tGAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTg < 1:577793/140‑1 (MQ=16) gAACGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGt < 1:4582257/140‑1 (MQ=12) aCGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAg < 1:4689601/140‑1 (MQ=18) cGCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAgg < 1:2478532/140‑1 (MQ=16) gCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGc < 1:4727033/140‑1 (MQ=18) gCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGc < 2:3522624/140‑1 (MQ=9) gCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGc < 2:3943322/140‑1 (MQ=12) gCCTTATCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGc < 2:4078636/140‑1 (MQ=12) cccTCATCCGGCCTACGGAC‑CGCGCGCGAAT‑TTGTCGGCCTGATACCACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGc < 2:317964/139‑1 (MQ=11) agccGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCTCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGAt > 1:4082704/3‑140 (MQ=255) aTCCGGCCTACGGAT‑GGCGCGGGAGT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAGCGCCTTATCCGGCCTACGGGTGGCGCGAGCAGTTGGAGGgatgat > 2:4959707/1‑140 (MQ=11) aTCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGAGGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAGCGGCTTATGCGGCCTACGGGTGGCGTGAGAAGTTTTAGGCCTGAt > 1:652762/1‑140 (MQ=11) aTCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGAt > 1:2457689/1‑140 (MQ=16) tCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTGGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATa < 2:2704739/140‑1 (MQ=12) tCCGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATa < 1:4913445/140‑1 (MQ=12) ccGGCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCCTCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATaa > 1:946540/1‑140 (MQ=255) ggCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGa < 1:3497169/140‑1 (MQ=16) ggCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGa < 1:2818637/140‑1 (MQ=16) ggCCTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGa < 2:2901334/140‑1 (MQ=17) ccTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATGCGGCCTACGGGTCGCGCGAGAATTTGTAGGCCTGATAAGAcg > 2:4388940/1‑140 (MQ=11) ccTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACggg > 2:420362/1‑109 (MQ=2) ccTACGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACggg < 1:420362/109‑1 (MQ=2) aCGGAT‑GGCGCGGGAAT‑TTGTAGGCTTGATAAGATGCTTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGGGTTAACGCCTTATTCGGCCTACGGGTGCCGCGAGTATTGTTAGGCCTGAGAAGACGCGt > 1:389544/1‑140 (MQ=11) aCGGAT‑GGCGCGGGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGt < 2:1448354/140‑1 (MQ=16) cGGAT‑GGCGCGTGGAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCTCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAGCGCCTGATCCCGCCTACGGGTGGCGGGAGAATCGGCAGGCGTGATAAGATGCGtt > 2:680625/1‑140 (MQ=11) | CTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGT‑GGCGCGAGAAT‑TTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATAAGACGCGTT > NZ_CP025268/373979‑374254 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |