| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,771,469 | (C)8→7 | intergenic (+91/‑265) | rnlB → / → yfjP | type II toxin‑antitoxin system antitoxin RnlB/GTPase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,771,462 | 0 | C | . | 97.7% | 1200.5 / 17.3 | 265 | intergenic (+84/‑272) | rnlB/yfjP | type II toxin‑antitoxin system antitoxin RnlB/GTPase family protein |
| Reads supporting (aligned to +/- strand): ref base C (0/2); major base . (30/227); minor base T (6/0); total (36/229) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.49e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 345 total aligned reads displayed.
AAGCCTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAACCCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGTG > NZ_CP025268/2771323‑2771597 | aaGCCTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAc < 1:5321894/140‑1 (MQ=255) atccTCTGTATTGTCTCCCGATGATGTACGCCAATTACTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAAACAGTATAGAATTCTCCCTTTTGGCATGATATTAACTTTTCCAATATGATCAAATAGCATTAAcc < 2:1612236/138‑1 (MQ=255) aGCCTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGATTTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAcc < 1:3817519/140‑1 (MQ=255) aGCCTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAcc < 1:5723786/140‑1 (MQ=255) aGCCTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAcc < 1:6290853/140‑1 (MQ=255) aGCCTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAcc > 1:3980463/1‑140 (MQ=255) gCCTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAccc < 2:5293837/140‑1 (MQ=255) gCCTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAccc < 1:8026316/140‑1 (MQ=255) gCCTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAccc < 1:9759769/140‑1 (MQ=255) gCCTCTGATTTGTCTCCCGATGATGTACGCCAAGACCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCAAATATGATCAAATAGCATTAAccc < 2:1677290/140‑1 (MQ=255) ccTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAcccc < 1:6136694/140‑1 (MQ=255) ctctGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAccccc < 1:1741658/140‑1 (MQ=255) ctctGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAccccc < 1:9329782/140‑1 (MQ=255) ttttGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAccccccctca < 2:4995426/140‑4 (MQ=255) ttGTCTCCCTATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 2:7799530/140‑1 (MQ=255) ttGTCTCCCGATTATGTACGCAAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGTCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 2:2969463/140‑1 (MQ=255) ttGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 1:9565871/140‑1 (MQ=255) ttGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 1:3010960/140‑1 (MQ=255) ttGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 1:9158376/140‑1 (MQ=255) ttGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 1:356399/140‑1 (MQ=255) ttGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 1:8554685/140‑1 (MQ=255) ttGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 2:10633431/140‑1 (MQ=255) ttGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 2:1854976/140‑1 (MQ=255) ttGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 1:7009476/140‑1 (MQ=255) ttGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 2:3998236/140‑1 (MQ=255) ttGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 2:7616171/140‑1 (MQ=255) ttGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 1:10707534/140‑1 (MQ=255) ttGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 1:5498422/140‑1 (MQ=255) ttGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 1:510617/140‑1 (MQ=255) tctcCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACg < 2:9878436/140‑1 (MQ=255) ctcCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGt < 2:5628772/140‑1 (MQ=255) ctcCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGt < 2:1526864/140‑1 (MQ=255) ctcCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGt < 1:9441477/140‑1 (MQ=255) ctcCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGt < 1:2574613/140‑1 (MQ=255) ctcCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGt < 1:9082169/140‑1 (MQ=255) ctcCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGt < 1:3599765/140‑1 (MQ=255) ctcCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGt < 2:3072207/140‑1 (MQ=255) tcCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTc < 2:4096590/140‑1 (MQ=255) tcCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTc < 2:1462789/140‑1 (MQ=255) tcCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTc < 1:3273767/140‑1 (MQ=255) tcCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTc < 1:3501081/140‑1 (MQ=255) tcCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTc < 1:2522250/140‑1 (MQ=255) tcCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTc < 2:8590587/140‑1 (MQ=255) tcCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTc < 1:3876732/140‑1 (MQ=255) acccGATGATGTACGACAAGTCCTTTCAATTGATTTTTGAAACTCTACTTTCTAAACGAACCAGTATAGAATTCGCCCATTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTc < 2:5444165/139‑1 (MQ=255) cccTATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCATTATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTcc < 2:8924009/140‑1 (MQ=255) cccGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTcc < 2:9322159/140‑1 (MQ=255) cccGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTc > 1:4201409/1‑139 (MQ=255) ccGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCt < 1:4288394/140‑1 (MQ=255) cGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 1:7743892/132‑1 (MQ=255) gatgatGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGc < 1:8842074/140‑1 (MQ=255) atgatgTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCa < 2:4735720/140‑1 (MQ=255) gatgTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATa < 2:4356423/140‑1 (MQ=255) tACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGa < 2:9782997/140‑1 (MQ=255) aCGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGaa < 1:9840147/140‑1 (MQ=255) cGCCTAGTACTGTCTATGTATTTTTGAATCTCTTATTTCTAATCTAACAATTATAGAATTAGCCCTTATGGCATGATATTAACTTGTCCTATATGATCAAATAGCATTAA‑ACCCCCCTCACAACGACCTGCTTAGGGAac < 2:7046824/140‑1 (MQ=255) cGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAac < 2:715705/140‑1 (MQ=255) cGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAac < 1:3117999/140‑1 (MQ=255) cGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAac < 1:8961801/140‑1 (MQ=255) cGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAac < 1:8734864/140‑1 (MQ=255) cGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAac < 1:6841571/140‑1 (MQ=255) cGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAac < 1:412747/140‑1 (MQ=255) cGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAac < 2:8839957/140‑1 (MQ=255) cGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAAGAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAac < 2:4214292/140‑1 (MQ=255) cGCCAAGGCCTGTCAATGGATTTTTGAAACTCTTCTTTCGAAACGAACCAGTATAGAATTCGCCCATTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAac < 2:5869510/140‑1 (MQ=255) attCCTGTCAAAGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGtt < 2:7352434/138‑1 (MQ=255) tCCTGTCAATGGATTTTTGAAACTCTTCATTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGtttt < 1:3397256/140‑1 (MQ=255) tGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTccc < 1:4740704/140‑1 (MQ=255) tGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTccc < 2:3540076/140‑1 (MQ=255) tGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTccc < 1:7531336/140‑1 (MQ=255) gTCAATGGATTTTTGATACTCTTCTTTCTAACCGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTATCTTGTCCAATATGATCAAATCGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTcccc < 2:6449610/140‑1 (MQ=255) gTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTcccc < 2:5666121/140‑1 (MQ=255) ttttGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCa < 2:9572571/140‑1 (MQ=255) tttGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCAc < 1:10050964/140‑1 (MQ=255) aaaCTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACt < 1:8675300/140‑1 (MQ=255) tttctAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTccc < 1:8434572/140‑1 (MQ=255) tttctAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTccc < 1:1934380/140‑1 (MQ=255) tttctAAACGAACCAGTATAGAATTCGCAATTTTGTCATGATATTAACTTGTCCAATATGATAAAATATCATTAA‑CCCCCCCTCTCAAAGTCCTGAATAGTGAACACTTTTTACCCTGTTCACCCAGTTCTATATTTcac < 2:2558309/140‑3 (MQ=255) cGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTa < 1:4485556/140‑1 (MQ=255) aCCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAAc < 1:7119379/140‑1 (MQ=255) ttCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAcc > 2:8702514/1‑54 (MQ=255) gCCCTTTTGGCATGATAGTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGGCATGCAAAGGGAACACGTTTTCCCCTGTGAACACACGACTAAATTTCCCCACCGATAAAGTTCTCTATAGTGTCa > 2:6159154/1‑140 (MQ=255) tttGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca > 2:3752027/1‑56 (MQ=255) gTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca > 1:2300478/1‑37 (MQ=255) gTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 2:2300478/37‑1 (MQ=255) gTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTatgat < 1:7664590/140‑1 (MQ=255) tCCAATATGATCAAATAGCATT‑ATCCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCTCGACTAAATTTCGGGCGGGTTATAGTGCTCAATAATGTGACCAATGTTCTGGTAATGCTttgatg > 2:10255761/1‑140 (MQ=255) aTCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCg < 1:2141710/140‑1 (MQ=255) aTCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCg < 1:10336113/140‑1 (MQ=255) aTCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCg < 1:1454678/140‑1 (MQ=255) tCAAATAGCATTAA‑CCCCCCCTCACATCGTCCTGCATAGGGAACACGTTGTCCCCTGTGCACCCACGACTAAATTTCGCCCCCTGTTATCTTCTCTAGTATGTCACCGATTTTATGGTAATGCTGTGAGGCCtttacagg > 2:8299389/1‑135 (MQ=255) tCAAATAGCATTAA‑CCCCCCCGCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTATTCTTCTCAGGAATGTCACCAATTTTCTGGTATTCCTATGATGCCTTTCCCgg > 2:6874530/1‑140 (MQ=255) tCAAATAGCATTAA‑CCCAGCCTCTCAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTTAATTTGCCCCCCTTTAAACGTCTCAATAATGTCCCCAATTTTATGGAAATCCTATGATGCCTTTGCCgg > 2:8080247/1‑140 (MQ=255) cAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGt < 1:2820194/140‑1 (MQ=255) aTAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTaaa < 1:8308002/140‑1 (MQ=255) aGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATg < 1:7174646/140‑1 (MQ=255) cATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGt < 1:1228772/140‑1 (MQ=255) cATTAA‑CCCCCCCGCACAACGGCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCGTTGATCTTCTCTATAATGTCACCAAGTTTATGGAAATCCTCTGATGCCTTTCCCGGTAAATggg > 2:9211963/1‑139 (MQ=255) aTTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGACTTTCCCGGTAAATGGTg > 2:4009569/1‑140 (MQ=255) aTTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCGGTCAACGTCTCACTAATGTCCCCAAGGTTCTGGAAGTCCTCGGTTGCCGGTCCCGGGAGATgggg > 1:2487897/1‑138 (MQ=255) | AAGCCTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAACCCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGTG > NZ_CP025268/2771323‑2771597 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |