| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,817,731 | (A)9→8 | intergenic (‑41/+26) | pyrE ← / ← rph | orotate phosphoribosyltransferase/ribonuclease PH |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,817,723 | 0 | A | . | 99.6% | 2135.5 / 0.2 | 445 | intergenic (‑33/+34) | pyrE/rph | orotate phosphoribosyltransferase/ribonuclease PH |
| Reads supporting (aligned to +/- strand): ref base A (1/1); new base . (202/241); total (203/242) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 | |||||||||||
Only 100 of 481 total aligned reads displayed.
GAAGAAATAGGGGCTTTTGCGCCCGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGTTACAAT‑GGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCC > NZ_CP025268/3817586‑3817857 | gaagaaATAGGGGCTTTTGCGCCCGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACaaa < 2:4439006/140‑1 (MQ=255) aagaaATAGGGGCTTTTGCGCCCGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACaaaa > 2:3458473/1‑140 (MQ=255) aagaaATAGGGGCTTTTGCGCCCGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACaaaa > 1:8752724/1‑140 (MQ=255) aagaaATAGGGGCTTTTGCGCCCGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACaaaa > 1:3635216/1‑140 (MQ=255) aagaaATAGGGGCTTTTGCGCCCGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAAGTCATTAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACaaat > 2:1865364/1‑139 (MQ=255) aTAGGGGCTTTTGCGCCCGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACaaaaaaaag > 2:10911668/1‑139 (MQ=255) aTAGGGGCTTTTGCGCCCGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACaaaaaaaag > 2:1465950/1‑139 (MQ=255) aTAGGGGCTTTTGCGCCCGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACaaaaaaaag > 1:9672070/1‑139 (MQ=255) aTAGGGGCTTTTGCGCCCGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGAGCTGATATGGTTTCATGCCGTCGCTCCTCATCTTACTTTTCTACAGACaaaaaaaag > 1:6702027/1‑139 (MQ=255) aGGGGCTTTTGCGCCCGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACaaaaaaaaggc > 1:895784/1‑137 (MQ=255) ggCTTTTGCGCCCGGATTTCAGCGTAACCTCGCCAAACTAAACCACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGAc < 2:7161565/140‑1 (MQ=255) ttttGCGCCCGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCACATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACtca > 1:10431330/1‑140 (MQ=255) tttGCGCCCGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGACTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAATGGCGACtcat > 2:5936947/1‑140 (MQ=255) gcCCTGATTTCATCTTAAACTCGACAAACTTTAACACCTGCTTGCTAAGCGAAAATTCAATAAACTGGCGATGATTTTGTTTCATGCATTCGCTCCTAATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTc < 2:6142564/140‑1 (MQ=255) cccGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTTATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCg < 1:9868008/140‑1 (MQ=255) cccGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCTTCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCg > 1:4658587/1‑140 (MQ=255) ggATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCt < 2:4661859/140‑1 (MQ=255) tCAGCGTAAACTCGCCAAACTTTCACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCTCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCGACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTaaaa < 2:8081232/140‑1 (MQ=255) tCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTaaaa < 1:10590677/140‑1 (MQ=255) cGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCa > 1:6222587/1‑140 (MQ=255) aaaCTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGtt > 1:2230751/1‑140 (MQ=255) aaCTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGttt > 1:10660295/1‑140 (MQ=255) cTCGCCAAACTCTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGc < 1:5874148/140‑1 (MQ=255) cGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAACCTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCa < 2:173236/140‑1 (MQ=255) gCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAg > 1:7416696/1‑140 (MQ=255) cAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAgcg < 1:5428861/140‑1 (MQ=255) aaCTTTCACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGcgcc < 2:5368404/140‑1 (MQ=255) ttAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAATAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCt > 2:5738145/1‑140 (MQ=255) ttAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCt > 1:3088915/1‑140 (MQ=255) ttAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCt > 2:9595190/1‑140 (MQ=255) aaCACATGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTACTCATCTAACTTTTCTACAGAC‑AAAAAAAAGGCTACACATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCtac > 2:8244672/1‑138 (MQ=255) ccTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGcg < 2:7888220/140‑1 (MQ=255) cTGCTTGCTAAGCGCAAATTCAATTAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGcgt < 2:6846136/140‑1 (MQ=255) cTGCTTGCTAAGCGCAAATTCAATCAACTTGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGcgt < 2:840264/140‑1 (MQ=255) cTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGcgt < 1:10009647/140‑1 (MQ=255) cTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGcgt > 1:5489163/1‑140 (MQ=255) tgcttgctAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGcgtc > 1:6911592/1‑140 (MQ=255) tgcttgctAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGcgtc > 1:9267172/1‑140 (MQ=255) gcttgctAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCCTCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCATTAAAAATCAGTTTGCCAGCGCCGCCTTCTGcgtcg > 2:5211626/1‑140 (MQ=255) gcttgctAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAATGGCGACTCATCAGTCGCCTTCAAAATCAGTTTGCCAGCGCCGCCTTCTGcgtcg > 2:7714610/1‑140 (MQ=255) gcttgctAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGcgtcg > 2:10713599/1‑140 (MQ=255) gcttgctAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGcgtcg > 1:2913219/1‑140 (MQ=255) gcatgctAAGCTCAAAAACAATAAACTGGCGCTGATATGGTTTCATGACATCGCTCCTCAACTAACATTTCTACAGAC‑AAAAAAAAGGCGACACATCAGACTCCATAAAAAACAGTATACCAGCACCGCCTACTGcgtct > 2:6106169/4‑139 (MQ=255) cttgctAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGcgtcgc < 2:740058/140‑2 (MQ=255) gctAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCGTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTAc < 1:6133629/140‑1 (MQ=255) cgcAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑Gga > 1:4067291/1‑140 (MQ=255) tCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑Ggattcgatt < 1:4892536/140‑1 (MQ=255) tCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑Ggattcgatt < 1:10911668/140‑1 (MQ=255) tCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGATTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑Ggattcgatt < 1:1546878/140‑1 (MQ=255) aaTAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGATTCGATTcc < 1:5982926/140‑1 (MQ=255) aaaCTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGATTCGATTCCCCt < 1:4765032/140‑1 (MQ=255) aaaCTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGATTCGATTCCCCt < 2:10150851/140‑1 (MQ=255) aaaCTGGCGCTGATATGGTTTCATGCCTTCGCACCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAAACAGTTTGCCAGCTCCGCCTTCTGCGTCGCTACAAT‑GGATTCGATTCCCCt < 1:6419194/140‑1 (MQ=255) aaaCTGGCGCTGATATGGGTTCATGCCTTCGCTCCTCCTCTTACTTTTCTCCAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTGTGCCAGCGCCGCCTTCTGCGTCGCGACAAT‑GGATTCGATTCCCCt < 2:4122249/140‑1 (MQ=255) aCTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCAACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGATTCGATTCCCCTCg < 1:4516900/140‑1 (MQ=255) ggCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGATTCGATTCCCCTCGGGc < 1:5346715/140‑1 (MQ=255) ggCGCTGATATGGTTTCATGCCTTCGCACCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGATTCGATTCCCCTCGGGc > 2:9369302/1‑140 (MQ=255) ggCGCTGATATGGACTCATGCCTTCGCTCCTCATCTTACTTTTCTCCAGAC‑ACAACAAAGGCGACTCATCAGTCGCCTTAAAAATCCGTTTGCCAGCGCCGCCTTCTGCGTAGCGACAAT‑GGATTAGATTCCCCTCGGGc < 2:9098344/140‑1 (MQ=255) gcgcTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAATTCAGTTTGCCAGCGCCGCCTGCTGCTTCGCTACAAT‑GGATGCTATTCCCCTCGGGcc > 1:2533683/1‑140 (MQ=255) cgcTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGATTCGATTCCCCTCGGGCCa > 2:4928546/1‑140 (MQ=255) cgcTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGATTCGATTCCCCTCGGGCCa > 1:8293627/1‑140 (MQ=255) cTGATATGTATTCATGCCTTCGCTCCTCATCTTACTTTTATACAGAC‑AAAAAAAAGGCGACTCATAAGTCGCCTTAAAAATCAGTTTGCCATCGCCGCCTTCTGCGTCGCTACAAT‑GGAGTCGATTCACCTCTGGCCaga > 2:319400/1‑140 (MQ=255) tGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGATTCGATTCCCCTCGGGCCAGAGCcaac < 2:4395195/140‑1 (MQ=255) tGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGATTCGATTCCCCTCGGGCCAGAGCcaac < 1:8680031/140‑1 (MQ=255) ggTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGATTCGATTCCCCTCGGGCCAGAGCcaaca < 2:1273504/140‑1 (MQ=255) ggTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGATTCGATTCCCCTCGGGCCAGAGCcaaca < 2:10287243/140‑1 (MQ=255) ggTTTCATGCCTTCGCTCCTCATCGTACTTTTCTACAGAC‑AAAAAAATGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCAGCGTCGATACAAT‑GGATTCGATTCACCTCGGGCCAGAGCcaaca > 2:10542372/1‑140 (MQ=255) tttCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGATTCGATTCCCCTCGGGCCAGAGCcaacaa > 2:6567789/1‑140 (MQ=255) tttCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACACT‑GGATTCGATTCCCCTCGGGCCAGAGCCAACAAg > 2:6740717/1‑140 (MQ=255) tCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGATTCGATTCCCCTCGGGCCAGAGCCAACAAGAt > 1:7964857/1‑140 (MQ=255) tCATGCCTTCGCACCTCATCTTACTATTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTAAAAATTCCGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGAAACGATACCCATCGGGCCAGAGCCACCAAGag > 2:7334294/1‑139 (MQ=255) aTGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCCTCAGTCGCATTAAAAATCAGTTTGCCCGCGCCGCCTGCTGCGTCGCGACAAT‑GGATTCGAGTCCCCTCGGGCCAGAGCCACCCAGATGa > 2:6313082/1‑140 (MQ=255) aTGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGa > 2:2205340/1‑140 (MQ=255) aTGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGa > 1:2396183/1‑140 (MQ=255) aTGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGa > 1:4324661/1‑140 (MQ=255) aTGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGa > 2:5649895/1‑140 (MQ=255) aTGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGAGTCGATTCCCCTCGGGCCAGAGCCAACAAGATGa > 2:2491420/1‑140 (MQ=255) tGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAATAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAg < 1:2750759/140‑1 (MQ=255) tGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAg < 1:5649895/140‑1 (MQ=255) tGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAg < 1:1200535/140‑1 (MQ=255) tGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAg < 2:3770192/140‑1 (MQ=255) gCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGt < 1:3871346/140‑1 (MQ=255) cTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAg < 1:7793801/140‑1 (MQ=255) cTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAg < 1:8394152/140‑1 (MQ=255) cTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAg < 1:776375/140‑1 (MQ=255) cTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAg < 1:8029744/140‑1 (MQ=255) cTTCGCTCCTCATCTTACTTTTCTACACAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACTAT‑GGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAg < 2:6999793/140‑1 (MQ=255) ttCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAg < 2:8888889/140‑1 (MQ=255) ttCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGc > 2:8798201/1‑140 (MQ=255) ttCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGc > 2:5448237/1‑140 (MQ=255) tCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGct > 1:3336600/1‑140 (MQ=255) tCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGct > 1:5178587/1‑140 (MQ=255) tCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGct > 2:1975647/1‑140 (MQ=255) ctcctcATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCtt < 1:10111192/140‑1 (MQ=255) ctcctcATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCtt < 1:7122369/140‑1 (MQ=255) cctcATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCCGTTTGCCAGCGCCGCCTTCTGCGTCGCTACACT‑GGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCGTCa < 2:2747851/140‑1 (MQ=255) aCTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAAc < 2:7566274/140‑1 (MQ=255) ttttCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACgg > 1:1845897/1‑140 (MQ=255) tcgaCAGAC‑AAAAAATAGGCGACTCATCAGACGCCTGACAAAACAGTTTGCCAGCGCCGCCGTCTGCGTCGCTACAAA‑GGATTCGATTCCCCTCGGGCCCGAGCCACCACGATGAGTAGCTCGTCCTGGGTGAACGGCTc > 2:9792429/4‑140 (MQ=255) tCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAAT‑GGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGACCGGCTc > 1:939402/1‑140 (MQ=255) | GAAGAAATAGGGGCTTTTGCGCCCGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGTTACAAT‑GGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCC > NZ_CP025268/3817586‑3817857 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |