Predicted mutation
evidence seq id position mutation annotation gene description
RA NZ_CP025268 939,446 (A)7→8 intergenic (‑289/‑255) trxB ← / → lrp thioredoxin‑disulfide reductase/leucine‑responsive transcriptional regulator Lrp

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP025268939,4391.A97.8% 3857.9 / 59.0 1025intergenic (‑282/‑262)trxB/lrpthioredoxin‑disulfide reductase/leucine‑responsive transcriptional regulator Lrp
Reads supporting (aligned to +/- strand):  ref base . (8/15);  new base A (298/701);  total (308/717)
Fisher's exact test for biased strand distribution p-value = 6.47e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 1219 total aligned reads displayed.

CTGCTACTTAAATTTCCCGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAG‑‑AAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGATGTCGATAGCTGCCACAAGGCAACGGTCTTCTCA  >  NZ_CP025268/939300‑939573
                                                                                                                                            |                                                                                                                                         
 tGCTACTTAAATTTCCCGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCACCTGGTGTTTTGCGAAAACATTCGAGgaag‑‑a                                                                                                                                         >  2:10051831/1‑140 (MQ=255)
 tGCTACTTAAATTTCCCGCTGGATAATCCGATTAAATTATGAATAAACGCCCCTGTTAATGAATATATGGCCTGGTGTACTAAAAATCGATGTTTTGCTATGACAAACCCCTCGAGTTTAGCGAAAACATTCTAGgaag‑‑a                                                                                                                                         >  2:6244701/1‑140 (MQ=255)
   cTACTTAAATTTCCCGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAG‑‑aaa                                                                                                                                      >  1:3847482/1‑140 (MQ=255)
   cTACTTAAATTTCCCGCTTTATAAGCAGATTAAATGAAGAATAAACGCACCAGTTAATGAAAATCTGGCATGTTGAAATAAAAATCGATTTTATGCTTAGACAATCACCTGGTGTTTATCGAAAACATTCGAGGAAG‑‑aaa                                                                                                                                      >  1:6527351/1‑140 (MQ=255)
        tAAATTTCCCGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAG‑‑aaaaaaaa                                                                                                                                 <  2:2839365/140‑2 (MQ=255)
        tAAATTTCCCGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAG‑‑aaaaaaaa                                                                                                                                 <  1:9298866/140‑2 (MQ=255)
          aaTTTCCCGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAG‑‑aaaaaaaaca                                                                                                                               <  1:882996/140‑4 (MQ=255)
            tttCCCGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAG‑‑aaaaaaaacagt                                                                                                                             <  2:188010/140‑6 (MQ=255)
             ttCCCGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTa                                                                                                                            <  2:5043901/140‑1 (MQ=255)
             ttCCCGCTTTATAAGCCGAATAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTa                                                                                                                            <  1:9019129/140‑1 (MQ=255)
               cccGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTAtt                                                                                                                          <  2:943219/140‑1 (MQ=255)
               cccGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTAtt                                                                                                                          <  2:1582142/140‑1 (MQ=255)
               cccGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTAtt                                                                                                                          <  2:5579205/140‑1 (MQ=255)
                ccGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTc                                                                                                                         >  1:7968836/1‑140 (MQ=255)
                 cGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCt                                                                                                                        >  2:7864347/1‑140 (MQ=255)
                 cGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCt                                                                                                                        >  1:7388398/1‑140 (MQ=255)
                    tttATAAGCCGATTAAATGATTAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTtat                                                                                                                     <  1:2143931/140‑1 (MQ=255)
                    tttATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTtat                                                                                                                     <  2:2001764/140‑1 (MQ=255)
                    tttATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTtat                                                                                                                     <  2:3765219/140‑1 (MQ=255)
                    tttATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTtat                                                                                                                     <  2:9281375/140‑1 (MQ=255)
                    tttATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTtat                                                                                                                     <  2:2303745/140‑1 (MQ=255)
                    tttATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTtat                                                                                                                     <  1:6051146/140‑1 (MQ=255)
                    tttATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTtat                                                                                                                     <  1:10148650/140‑1 (MQ=255)
                    tttATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTtat                                                                                                                     <  1:10414101/140‑1 (MQ=255)
                      tataATCAGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATAGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAG‑‑AAAAAAATCAGTATTCTTatat                                                                                                                   <  2:8578728/140‑1 (MQ=255)
                      tataAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTatat                                                                                                                   <  2:6625577/140‑1 (MQ=255)
                         aaGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTTTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGAGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATgcg                                                                                                                <  1:4881624/140‑1 (MQ=255)
                         aaGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATgcg                                                                                                                <  1:2646617/140‑1 (MQ=255)
                         aaGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATgcg                                                                                                                <  1:1994369/140‑1 (MQ=255)
                           gCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCa                                                                                                              <  2:1472335/140‑1 (MQ=255)
                              gATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATaa                                                                                                           >  1:5527115/1‑140 (MQ=255)
                              gATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATaa                                                                                                           >  1:6738357/1‑140 (MQ=255)
                              gATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAG‑‑aaaaaaaa                                                                                                                                 >  2:765830/1‑117 (MQ=255)
                                ttAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAAcc                                                                                                         >  2:2125238/1‑140 (MQ=255)
                                ttAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAAcc                                                                                                         >  2:3949282/1‑140 (MQ=255)
                                ttAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAAcc                                                                                                         >  1:5314144/1‑140 (MQ=255)
                                 tAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACca                                                                                                        <  1:9819826/140‑1 (MQ=255)
                                 tAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACca                                                                                                        <  2:5314144/140‑1 (MQ=255)
                                   aaagatgaAGAAACGCCCCTGTTAATGACTATCTGGCATGTTGTACTAAAAATCGATGTGTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACcatg                                                                                                      <  2:7133090/137‑1 (MQ=255)
                                   aaTGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACcatg                                                                                                      <  1:6630193/140‑1 (MQ=255)
                                   aaTGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACcatg                                                                                                      <  1:2477789/140‑1 (MQ=255)
                                   aaTGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACcatg                                                                                                      <  1:8194243/140‑1 (MQ=255)
                                   aaTGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACcatg                                                                                                      <  1:8506671/140‑1 (MQ=255)
                                   aaTGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACcatg                                                                                                      <  2:2527739/140‑1 (MQ=255)
                                   aaTGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACcatg                                                                                                      <  2:1182151/140‑1 (MQ=255)
                                     tgatgaATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTatat                                                                                                                   >  2:3561474/1‑125 (MQ=255)
                                     tgatgaATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACcatgca                                                                                                    <  1:4324494/140‑1 (MQ=255)
                                      gatgaATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACcatgcat                                                                                                   >  1:8356232/1‑140 (MQ=255)
                                         gaacccaCGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTa                                                                                                <  1:6959276/134‑1 (MQ=255)
                                         gaATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTa                                                                                                >  2:334215/1‑140 (MQ=255)
                                             aaaCGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATa                                                                                            >  1:751516/1‑140 (MQ=255)
                                              aaCGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATAc                                                                                           <  1:10050874/140‑1 (MQ=255)
                                                    ccTGTTAATGACTATCTGGCATGTTGTACTAAAAATCGATCTTTTGCTGTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCAGAACCATGCATGTAAATACCATGtt                                                                                     <  2:83830/140‑1 (MQ=255)
                                                      tGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACcatgca                                                                                                    <  1:9437428/123‑1 (MQ=255)
                                                      tGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTa                                                                                   <  1:573297/140‑1 (MQ=255)
                                                      tGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTa                                                                                   >  1:3585738/1‑140 (MQ=255)
                                                      tGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTa                                                                                   <  2:415977/140‑1 (MQ=255)
                                                      tGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTa                                                                                   >  1:7713727/1‑140 (MQ=255)
                                                        ttAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACca                                                                                                        <  2:10576865/117‑1 (MQ=255)
                                                        ttAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTAcc                                                                                 >  1:1202463/1‑140 (MQ=255)
                                                           aTGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTg                                                                              <  1:313388/140‑1 (MQ=255)
                                                              aaTATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCCTGCATGTAAATACCATGTTTACCGTGCTa                                                                           <  2:9760854/140‑1 (MQ=255)
                                                                tatCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCAGGCATGTAAATACCATGTTTACCGTGCTAGt                                                                         <  1:7824443/140‑1 (MQ=255)
                                                                  tCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAAACAGTATTCTTATATGCGCATAACcatg                                                                                                      >  1:7127777/1‑110 (MQ=255)
                                                                  tCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATAc                                                                                           <  2:9065056/120‑1 (MQ=255)
                                                                  tCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGa                                                                       >  1:5041041/1‑140 (MQ=255)
                                                                  tCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAG‑‑aaa                                                                                                                                      >  2:4355953/1‑77 (MQ=255)
                                                                    tGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGaaa                                                                     <  1:334215/140‑1 (MQ=255)
                                                                    tGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGaaa                                                                     <  2:6008597/140‑1 (MQ=255)
                                                                     ggCATGTTGTACTGAAAATCGATGTTTTGCTTTGACAATCCCCTAGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAAt                                                                    >  1:5924730/1‑140 (MQ=255)
                                                                     ggCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACcatg                                                                                                      >  1:7631463/1‑106 (MQ=255)
                                                                     ggCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTg                                                                              <  2:10744053/130‑1 (MQ=255)
                                                                     ggCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAAt                                                                    <  1:10776033/140‑1 (MQ=255)
                                                                     ggCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAAt                                                                    >  1:2306705/1‑140 (MQ=255)
                                                                     ggCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAAt                                                                    >  1:8674654/1‑140 (MQ=255)
                                                                      gCATGTTGTACTAAAAATCGCTGTTTTGCTTTGACAATCCCCTGGTGATTTGCGAAAACATTCGAGGAAG‑‑ACAAAAAACAGGATTCTTATATGCGCAGAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATc                                                                   <  2:10395243/140‑1 (MQ=255)
                                                                      gCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATc                                                                   <  2:4611357/140‑1 (MQ=255)
                                                                          gttgtACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTACATACCATGTTTACCGTGCTAGTGAAATCTACg                                                               >  2:10850580/1‑140 (MQ=255)
                                                                          gttgtACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATAc                                                                                           >  2:10223133/1‑112 (MQ=255)
                                                                          gttgtACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTg                                                                        <  2:686034/131‑1 (MQ=255)
                                                                          gttgtACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACg                                                               >  1:10591538/1‑140 (MQ=255)
                                                                           ttgtACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGt                                                              <  1:402095/140‑1 (MQ=255)
                                                                           ttgtACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGt                                                              <  1:170222/140‑1 (MQ=255)
                                                                           ttgtACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGt                                                              <  1:1890792/140‑1 (MQ=255)
                                                                           ttgtACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGATTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGt                                                              <  1:1342557/140‑1 (MQ=255)
                                                                                cTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAAc                                                                                                          >  2:262155/1‑91 (MQ=255)
                                                                                cTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGc                                                         >  1:4590708/1‑140 (MQ=255)
                                                                                   aaaaTCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGCGTg                                                      >  2:4771464/1‑140 (MQ=255)
                                                                                     aaTCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACTATGTTTACCGTGCTAGTGAAATCTACGTATGGCGTGGa                                                    >  2:8710417/1‑140 (MQ=255)
                                                                                        cGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTatat                                                                                                                   >  2:7465930/1‑74 (MQ=255)
                                                                                                          aTCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGATGTCg                               >  2:6391589/1‑140 (MQ=255)
                                                                                                                     ttttGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGATGTCGATAGCTGCcac                    >  1:9609412/1‑140 (MQ=255)
                                                                                                                       ttGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGATGTCGATAGCTGCCACaa                  >  2:3073598/1‑140 (MQ=255)
                                                                                                                             aaaCATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGATGTCGATAGCTGCCACAAGGCAAc            <  1:2762755/140‑1 (MQ=255)
                                                                                                                             aaaCATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGATGTCGATAGCTGCCACAAGGCAAc            <  2:5872453/140‑1 (MQ=255)
                                                                                                                              aaCATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGATGTCGATAGCTGCCACAAGGCAACg           <  2:8896239/140‑1 (MQ=255)
                                                                                                                                cATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGATGTCGATAGCTGCCACAAGGCAACGGt         <  1:1515024/140‑1 (MQ=255)
                                                                                                                                     gAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGATGTCGATAGCTGCCACAAGGCAACGGtcttct    <  2:8068901/140‑1 (MQ=255)
                                                                                                                                     gAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGATGTCGATAGCTGCCACAAGGCAACGGtcttct    <  1:6257158/140‑1 (MQ=255)
                                                                                                                                     gAGGAAG‑‑ATAAAAAACAGAATTCTTATATGCGCATACCCAGGCATGTAAATACCATGTTTACCGTGCTAGTGAACTCTACGTCTGGCGTGGACAGACGCCATTCGTGATGTCGATAGCTGCCACAAGGCAACGGtcgtct    <  2:8215114/140‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                         
CTGCTACTTAAATTTCCCGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAG‑‑AAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGATGTCGATAGCTGCCACAAGGCAACGGTCTTCTCA  >  NZ_CP025268/939300‑939573

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: