| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,701,269 | +A | intergenic (‑380/+10) | uidA ← / ← uidR | beta‑glucuronidase/DNA‑binding transcriptional regulator UidR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,701,265 | 1 | . | A | 90.8% | 2264.1 / 199.5 | 655 | intergenic (‑376/+14) | uidA/uidR | beta‑glucuronidase/DNA‑binding transcriptional regulator UidR |
| Reads supporting (aligned to +/- strand): ref base . (22/38); new base A (272/320); total (296/359) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.76e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 672 total aligned reads displayed.
AGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑G‑A‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTA > NZ_CP025268/1701126‑1701397 | gTATTGGGAACGATAAACTCTCATGACATAGGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGACATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑G‑a‑a‑a < 2:1528336/140‑1 (MQ=255) tGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑G‑a‑a‑aaaga < 1:5623173/140‑4 (MQ=255) tGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑G‑a‑a‑aaaga < 1:4286811/140‑4 (MQ=255) ggAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑G‑A‑A‑aa‑‑agaga < 2:2309787/140‑1 (MQ=255) aaCGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑G‑A‑A‑Aa‑‑agagaga > 2:886147/1‑140 (MQ=255) aaCGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑G‑A‑A‑Aa‑‑agagaga > 1:2507523/1‑140 (MQ=255) gATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGACGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGaa > 2:8585549/1‑140 (MQ=255) aTAAACTCTCATGCCATATGGCTACTGTGTATAGTTTGGGGGGAAGTCTCCGAAGCCGGGAAGGATACTTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑gagagagact < 2:1351924/140‑3 (MQ=255) aTAAACTCTCATGACATATGGCTACAGTGAAGATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAAt < 2:5131370/140‑1 (MQ=255) tAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGACTc > 2:10881617/1‑140 (MQ=255) aaaCTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCa < 1:3295488/140‑1 (MQ=255) tctcATGACATATTGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGAt < 2:6727814/140‑1 (MQ=255) tctcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGAt < 2:5729740/140‑1 (MQ=255) tctcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGAt < 2:9151177/140‑1 (MQ=255) tctcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGAt > 1:4798381/1‑140 (MQ=255) tctcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGAt < 2:3961549/140‑1 (MQ=255) tcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGc > 1:3790705/1‑140 (MQ=255) tcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGc < 2:2033648/140‑1 (MQ=255) tcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGc < 2:2586438/140‑1 (MQ=255) tcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGc < 1:1550440/140‑1 (MQ=255) cATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCg > 1:2021481/1‑140 (MQ=255) tGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAgg < 2:8311667/133‑1 (MQ=255) tGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGt < 2:3293267/140‑1 (MQ=255) gACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGtt < 2:10273598/140‑1 (MQ=255) gACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGtt < 2:5512523/140‑1 (MQ=255) atatGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAg > 1:4013716/1‑140 (MQ=255) tatGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAATCGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGa > 2:4708923/1‑140 (MQ=255) tatGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGa > 1:9632255/1‑140 (MQ=255) tGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATa > 2:9849705/1‑140 (MQ=255) cAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCa > 1:10488512/1‑140 (MQ=255) cAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCa > 1:8149441/1‑140 (MQ=255) cAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCa < 1:8073300/140‑1 (MQ=255) cAGTGAATATGTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑G‑ACA‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCa > 2:7482215/1‑140 (MQ=255) aGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCaa > 2:2420643/1‑140 (MQ=255) aGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCaa > 1:9219096/1‑140 (MQ=255) aaTATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAatcat > 2:10496873/1‑140 (MQ=255) aaTATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAatcat > 1:9893729/1‑140 (MQ=255) aaTATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAatcat > 1:4627567/1‑140 (MQ=255) aaTATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAatcat > 1:7426869/1‑140 (MQ=255) atatTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAatcatc > 1:10244464/1‑140 (MQ=255) tattatGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGTCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATcg > 2:3149496/1‑140 (MQ=255) tatTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATcg > 1:8473384/1‑140 (MQ=255) tatTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAAGCAGGATGCGGTTAAGATACCGCCAATCATcg < 1:8865528/140‑1 (MQ=255) ttttGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATcgcg < 1:2968283/140‑1 (MQ=255) ttGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGTATGCGGTTTAGATACCGCCAATCATcgcgcg > 2:8066973/1‑140 (MQ=255) tGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGt < 2:5000418/140‑1 (MQ=255) ggggggAATTCGCCGAAGCCGGGAAGGATAATTTTTGCACAGTGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGCGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTa > 2:1793774/1‑140 (MQ=255) ggggAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAAt > 1:9010870/1‑140 (MQ=255) ggggAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAAt > 1:2793519/1‑140 (MQ=255) aaTTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCt < 2:9520053/140‑1 (MQ=255) aaTTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCt < 1:6295319/140‑1 (MQ=255) aaTTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCt > 1:5387708/1‑140 (MQ=255) ccGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAacgacg < 2:2894270/140‑1 (MQ=255) ccGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAacgacg < 1:140539/140‑1 (MQ=255) ccGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAacgacg < 1:6160845/140‑1 (MQ=255) ggAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCtt > 2:4256034/1‑140 (MQ=255) aaGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCa < 1:10408079/140‑1 (MQ=255) aaTTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGcc < 1:1184272/140‑1 (MQ=255) gCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCtt > 1:7251281/1‑140 (MQ=255) cacaGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTc > 1:4946576/1‑140 (MQ=255) cacaGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTc < 1:1981309/140‑1 (MQ=255) agaAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAATCGACGCTTCACGCGCCAGGTCTTCCGCtt > 2:7713504/1‑140 (MQ=255) agaAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCtt < 2:4407786/140‑1 (MQ=255) agaAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCtt < 2:2781192/140‑1 (MQ=255) ttACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGata < 1:6459580/140‑1 (MQ=255) ttACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGata < 1:8279667/140‑1 (MQ=255) aCGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATc < 1:5227975/140‑1 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGTTGCGGTTAAGATAGCTCCAATCATCGCGCGTAAGCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc < 2:5948039/140‑1 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATc < 1:8588748/137‑1 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc < 2:6447429/140‑1 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc < 1:2203101/140‑1 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc < 2:4563/140‑1 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc > 1:10680231/1‑140 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc > 1:10865757/1‑140 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc < 1:6919840/140‑1 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc > 1:974812/1‑140 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAAGCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc < 2:9025247/140‑1 (MQ=255) gAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGt > 2:9389882/1‑140 (MQ=255) gAAACGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGt < 2:2162303/140‑1 (MQ=255) aaaCGCGGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTa < 2:10694056/140‑1 (MQ=255) cgcgGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATc > 2:631357/1‑83 (MQ=255) gcgGGCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACAcc < 1:5090398/140‑1 (MQ=255) ggCACAGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTa > 2:932051/1‑140 (MQ=255) cacaGTTATCACCAGCCCGCCTA‑A‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAgg < 2:3541970/140‑1 (MQ=255) cacaGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAgg < 1:182161/140‑1 (MQ=255) acaGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGt < 1:3721294/140‑1 (MQ=255) caGTTATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTc < 1:7066328/140‑1 (MQ=255) ttATCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGa > 1:4189028/1‑140 (MQ=255) aTCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATc < 2:5230734/140‑1 (MQ=255) tCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATcc < 2:721407/140‑1 (MQ=255) tCACCAGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATcc < 1:10015758/140‑1 (MQ=255) aGCCCGCCTA‑A‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCTTAATCCCTGATCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCcagcag < 2:3637493/140‑1 (MQ=255) aGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCcagcag < 2:5387708/140‑1 (MQ=255) aGCCCGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCcagcag > 1:7801313/1‑140 (MQ=255) cccGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCACACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTa > 2:4160165/1‑140 (MQ=255) cccGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCANTACACCGTAGGTCAGATCCAGCAGTa > 1:6664971/1‑140 (MQ=255) cccGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTa > 1:3568256/1‑140 (MQ=255) cccGCC‑GAA‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTa > 1:9458732/1‑140 (MQ=255) cccGCC‑G‑A‑ACAA‑GAGAGAGAAACAGGATGCGGTTAAGATACCGCCAATCAACGCGCGTAATCCAGGAGCAATCGACGCTTCACGCGACAGCTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGAGCCAGCAGTa > 2:7055028/1‑140 (MQ=255) cccGCC‑G‑A‑A‑AATGTGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCCTCGCGCGTACTCCCTGAGCAAGCGCCGCGTCTCGCGCCAGGTCTTCCGCTGCGATCTCGGCCAGTACACCGTAGGTCTGATCCAGCAGtg > 2:8810788/1‑139 (MQ=255) | AGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCC‑G‑A‑A‑AA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTA > NZ_CP025268/1701126‑1701397 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |