| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,014,858 | +G | intergenic (+159/+61) | arcC → / ← yqeB | carbamate kinase/selenium‑dependent molybdenum cofactor biosynthesis protein YqeB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,014,857 | 1 | . | G | 98.8% | 1632.8 / NA | 483 | intergenic (+158/+62) | arcC/yqeB | carbamate kinase/selenium‑dependent molybdenum cofactor biosynthesis protein YqeB |
| Reads supporting (aligned to +/- strand): ref base . (2/1); major base G (242/231); minor base T (2/4); total (247/236) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.42e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 492 total aligned reads displayed.
ATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑A‑GCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTCAAGTACG > NZ_CP025268/3014719‑3014991 | aTCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑A‑ggcaat > 2:5546738/1‑135 (MQ=255) tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAACTTCAATAGATTGCTATGCACGTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAAtt > 2:9336589/1‑140 (MQ=21) tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAAtt > 1:9591787/1‑140 (MQ=255) tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAAtt > 2:507257/1‑140 (MQ=255) tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGACTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCTTATCGCATC‑AGGCAAtt > 2:2051811/1‑140 (MQ=25) tCCGGCCAAAGATTGTCAAGTAAGTGAGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAAtt > 2:913242/1‑140 (MQ=255) ccGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAAttt > 1:10107090/1‑140 (MQ=255) ccGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAAttt > 2:7557456/1‑140 (MQ=255) gCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGc > 1:3011948/1‑140 (MQ=255) ccAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCg < 1:616912/140‑1 (MQ=255) acaGATTGACAAGTACGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGtt < 2:6929346/138‑1 (MQ=21) tGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGtcat < 2:6437930/140‑1 (MQ=255) tGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGtcat < 1:657150/140‑1 (MQ=255) tGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGtcat < 2:4649666/140‑1 (MQ=255) tGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGtcat < 2:4568530/140‑1 (MQ=255) tCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGtcatca > 1:7772519/1‑140 (MQ=255) gtaagtGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGtct > 1:4699827/1‑140 (MQ=255) gtaagtGCGCGTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCGG‑GCAATTTGGCGTTTGTCATCAGtct > 1:1135427/1‑140 (MQ=255) tGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGc < 1:6660738/140‑1 (MQ=255) gcgcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGcc > 1:3681279/1‑140 (MQ=255) gcgcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGcc > 1:7069588/1‑140 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 2:5667165/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 1:5315524/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 2:8615480/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 2:1024936/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 1:4087668/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 1:3822722/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 2:6104717/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGAGTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 2:404375/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTACTACAAAACATCGCAAATTCAATAGATTGCTATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 2:1364169/140‑1 (MQ=255) gcTTTGATGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGCTAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 2:1607864/140‑1 (MQ=255) tttGTTGATGCCGGATGCGGCGCGAGCGCCGTATCCGTCCTACAAAACCTCGCAAATGCAATAGAGTGCAATGCACTTGTAGGCCTGATAAGCGTCGCGCATC‑AGGCAATTTGGCGTTGGTCATCAGTCTCAGGCCgggt < 2:5320920/140‑1 (MQ=21) gttgATGCCGGTGGCGGCGCGAGCGCCATCTCCGTACTACAATACATCGCAAATTCTAGACATTGCAATGCACTTGTAGGCCTTATAAGCGTAGCTCATC‑AGGCAATTTGGCGATTGTCATCAGTCTCAGGCGtggtggg < 2:9798752/140‑1 (MQ=255) gttgATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgggtggg < 1:4151517/140‑1 (MQ=255) ggtgAGGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGGAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgggtggg < 1:5066951/138‑1 (MQ=21) tGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATa > 2:2806950/1‑140 (MQ=255) aTGCGGCGCGTGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTGTGTCATCAGTCTCAGGCCGGGTGGGTAATCCCATcc > 1:6339789/1‑140 (MQ=25) gcggcgCGAGCGCCTTCTCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCgg < 1:7414611/140‑1 (MQ=255) gcgAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCAtt < 1:606973/140‑1 (MQ=255) cgAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCAttt < 2:2602187/140‑1 (MQ=255) cgAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATACATTGCAATGCACTTTTAGGCCAGATAAGCGAAGCGCATC‑AGGCAAATTGGAGTTTGTCATCAGTCACAGGCCGGGTGGGTAATACCATCCGGCCAttt < 2:6569447/140‑1 (MQ=25) aGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTc > 1:10754224/1‑140 (MQ=255) tCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGcc < 2:2134194/140‑1 (MQ=255) gtacTACAAAACATCGCAATTTCAATATATTGAAATGCACTTGTAGGCCTGATAATCGTAGCGCATC‑AGGCACGTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTGCATGTAGGCCACt > 2:4756336/4‑140 (MQ=25) tCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACtt > 1:4538246/1‑140 (MQ=255) tCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACtt > 1:1776021/1‑140 (MQ=255) aCAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAg < 2:4386831/140‑1 (MQ=255) aaaCATCGCAACTTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAAGACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCAc < 1:7538022/140‑1 (MQ=255) cATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCActtc > 1:5498054/1‑140 (MQ=255) cATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCActtc > 1:2911980/1‑140 (MQ=255) cATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCActtc > 2:8010365/1‑140 (MQ=255) cATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTGTCATTTAAGCCACTTCCAGCActtc > 1:7229662/1‑140 (MQ=255) aTCGCATATTCAATTGATTGCTATTCACTTGTAGGCGTGATTAGCTTAGCGCATC‑ATGCCATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCGGTCCATTTTCAGTTTAGCCACTTCCAGCatgatc < 2:7069588/140‑6 (MQ=25) tCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCActtctt < 1:441488/140‑1 (MQ=255) tCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCActtctt < 1:2596515/140‑1 (MQ=255) tCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCActtctt > 1:972057/1‑140 (MQ=255) cGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCttt > 1:9225972/1‑140 (MQ=255) ccAAATTCAATACATTGCACTGCACTTGTAGGCCAGATAAGCGGAGCGCATC‑AGGCAATTTGGCGTATGTCATCAGTCTCCGGCCTGGTGGGTAATACCATCCGGCCATATTCATTTAAGCCACTTCCCGCACTTCattt < 2:7913119/139‑1 (MQ=25) cAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTg > 1:10345247/1‑140 (MQ=255) cAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGATAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTg > 1:9012270/1‑140 (MQ=255) aaaGTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCATTTGt < 1:8570739/140‑1 (MQ=255) aTTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCg < 1:3396856/140‑1 (MQ=255) tCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCt > 1:1708928/1‑140 (MQ=255) aaTAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCttt < 1:9536636/140‑1 (MQ=255) aTAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTc < 2:8827459/140‑1 (MQ=255) aTAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTc < 1:8599976/140‑1 (MQ=255) tAGATTGCAATGCACTTGTAGGCCTGATAAGCGTTGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGGAATACCATCCGGCCCTTTTCATTTAAGCCACTTCCAGCCCTTCTTTTGTCGCTGTCa > 1:6890991/1‑140 (MQ=37) tAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCa < 1:1284812/140‑1 (MQ=255) ttGCAATGCTCTTGTTGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGTCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTACAGCACTTCTTTTGTCGCTTTCACGcc < 1:8459271/140‑1 (MQ=38) ttGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTCATACCATCCGGCCATTGTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGcc > 2:7689120/1‑140 (MQ=255) aaTGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGa < 1:1991901/140‑1 (MQ=255) aaTGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGa < 1:2107137/140‑1 (MQ=255) tGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATg > 1:3954452/1‑140 (MQ=255) gCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGc < 2:8211192/140‑1 (MQ=255) cACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGACGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCa > 2:1936691/1‑140 (MQ=255) aCTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTACTTTTGTCGCTTTCACGCCCTGATGCAt < 1:10035774/140‑1 (MQ=255) ttGTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCa < 1:8180815/140‑1 (MQ=255) gTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAAc > 2:10880168/1‑140 (MQ=255) gTAGGCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGCCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAAc < 1:10537515/140‑1 (MQ=255) tAGGCCTGATACGCGAAGCGCATC‑ATGCAACTTGGCGTTCGTCATCAGTCGCATGCCGGGTGGGGAATACCATCCGGCCATATTCATTTAACCCACTTCCAGCACTTCTTTTGTCGCTGTCACGCCCTGATGCATCAAca < 2:9486530/140‑1 (MQ=255) ggCCTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAAcatc > 1:790176/1‑140 (MQ=255) ccTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAAcatcat > 1:1518770/1‑140 (MQ=255) ccTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATGTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAAcatcat > 2:10511706/1‑140 (MQ=255) cTGATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCAtt < 1:3188874/140‑1 (MQ=255) gATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCCTCAGTCTCAGGCCGTGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTTTCGCTTTCACGCCCTGATGCATCAACATCAttca > 2:7318754/1‑138 (MQ=38) gATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTaa > 2:10141112/1‑140 (MQ=255) gATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTaa > 1:9845305/1‑140 (MQ=255) gATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTaa > 1:10590189/1‑140 (MQ=255) gATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTaa > 2:9263226/1‑140 (MQ=255) gATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTaa > 1:5369807/1‑140 (MQ=255) gATAAGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCGTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTaa > 2:5806178/1‑140 (MQ=255) gATAAGCGTAGCGCATC‑ACGCAATTAGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAAAACCATCCGGCCATTTTCATTTAAGCCACTACCAGCACATCGATTGTAGCTTTCACGCCCTGATGCATCAAcatcctgaa > 1:8958092/1‑135 (MQ=37) aGCGTAGCGCATC‑AGGCAATTTGGCGTTTGTAATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGcc < 2:3453524/140‑1 (MQ=255) cGTAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTc > 1:5724432/1‑140 (MQ=255) cGTAGCGCATC‑AGGCAATTTGGCGTTTGTCAGCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTGTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTc > 1:8064478/1‑140 (MQ=255) tAGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTCaa > 2:835100/1‑140 (MQ=255) aGCGCATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTCAAg > 1:4635786/1‑140 (MQ=255) cgcATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTCAAGTa > 2:900042/1‑140 (MQ=255) cgcATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTCAAGTa > 1:2317877/1‑140 (MQ=255) cgcATC‑AGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCAACCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCa > 2:3737227/1‑104 (MQ=255) | ATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑A‑GCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTCAAGTACG > NZ_CP025268/3014719‑3014991 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |