| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,509,139 | +C | pseudogene (137/878 nt) | php ← | phosphotriesterase‑related protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,509,136 | 1 | . | C | 95.7% | 2467.7 / 95.7 | 737 | pseudogene (140/878 nt) | php | phosphotriesterase‑related protein |
| Reads supporting (aligned to +/- strand): ref base . (15/17); new base C (362/342); total (378/359) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.18e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 809 total aligned reads displayed.
CCACATGTTCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACG‑C‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCAAAA > NZ_CP025268/3508997‑3509270 | cacaTGTTCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTacgcacg‑c < 1:7029404/140‑1 (MQ=255) cacaTGTTCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTacgcacg‑c > 1:3392700/1‑140 (MQ=255) aTGTTCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACG‑c‑ccc < 1:2630256/140‑2 (MQ=255) ttCCGGGACAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTAGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACG‑C‑CCcggg < 2:9210002/140‑2 (MQ=255) ttCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACG‑C‑CCcggg > 2:8955895/1‑139 (MQ=255) ttCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACG‑C‑CCcggg < 2:5062094/140‑2 (MQ=255) ttCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACG‑C‑CCcggg < 2:9539803/140‑2 (MQ=255) ttCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACG‑C‑CCcggg > 2:3528719/1‑139 (MQ=255) tCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACG‑C‑CCcgggt > 1:1139295/1‑138 (MQ=255) ccGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGtc > 2:8592759/1‑140 (MQ=255) cGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGtca < 1:2766486/140‑1 (MQ=255) ggAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGtcatc > 1:4212764/1‑140 (MQ=255) gAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGtcatca < 1:2337115/140‑1 (MQ=255) aaaCGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGt < 1:9898937/140‑1 (MQ=255) cgTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTc < 1:10014655/140‑1 (MQ=255) taaCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCa > 2:3768999/1‑140 (MQ=255) taaCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCa > 1:4680086/1‑140 (MQ=255) aCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTACCGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCaaa > 1:187773/1‑140 (MQ=255) aCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCaaa < 2:4092485/140‑1 (MQ=255) aCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCaaa < 1:3852592/140‑1 (MQ=255) aCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCaaa < 2:1177818/140‑1 (MQ=255) aCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCaaa < 1:1325075/140‑1 (MQ=255) aCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCaaa > 1:9490137/1‑140 (MQ=255) aCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCaaa < 1:7622405/140‑1 (MQ=255) aCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCaaa < 1:10598613/140‑1 (MQ=255) gTACTGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCACGCTTAAATTGCGCATTGCGCCCCATGTGACGGTTGGTCATCTCAATCACAGTACGCACGCC‑CCGGGTCATCAGGTCGTTCATGGCCTGGCAAGTGaa > 2:1510663/1‑140 (MQ=255) gTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGaa > 1:4033579/1‑140 (MQ=255) gTACAGGCCACCACGTTGATCCCCGTCTCGAGCAGTACATACAGCATAAATTGCGCATTGCGCCCAATGTAACGGTGGGTCATCTCAATGACATAACGCTCT‑CGCCGTGTCATCAGGGCGTGCATCTCATGGAAAATGac > 2:226223/1‑139 (MQ=255) tACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAAc < 1:10105520/140‑1 (MQ=255) ggCCACCANGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCNCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCACCTGGCAAATGAACGCAt > 1:5916981/1‑140 (MQ=255) ggCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCAt > 2:3259156/1‑140 (MQ=255) ggCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGGCATCTCAATCACCTTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCACAGGAACGCAt > 2:9635641/1‑140 (MQ=255) gCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATa < 1:9624852/140‑1 (MQ=255) gCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATa > 2:7555792/1‑140 (MQ=255) gCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATa < 1:9228671/140‑1 (MQ=255) cacGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGAt > 2:10857274/1‑140 (MQ=255) cacGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGAt < 1:5818954/140‑1 (MQ=255) cacGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGAt > 1:5120255/1‑140 (MQ=255) tGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAgg > 1:8139747/1‑140 (MQ=255) aTCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGAt < 1:5602964/133‑1 (MQ=255) aTCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAggcg > 1:806895/1‑140 (MQ=255) ccccGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAggcggc > 2:10662147/1‑140 (MQ=255) ccccGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAggcggc > 2:3076454/1‑140 (MQ=255) ccccGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAggcggc < 1:315065/140‑1 (MQ=255) cGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCCTGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATCCTGATCAAGGCGGCAga > 2:4543555/1‑139 (MQ=255) tctcGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTcc > 2:385000/1‑140 (MQ=255) tctcGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTACATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTcc > 2:872110/1‑140 (MQ=255) cgcgCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACg > 1:4970972/1‑140 (MQ=255) cgcATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACTGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGTTCGTTCATCTCCTGGCAAATGAACGCATACTGAGCAAGGCGGCAGTCCACgtt > 2:279152/1‑140 (MQ=255) cgcATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACgtt > 1:940463/1‑140 (MQ=255) tACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGtttt < 1:8358689/140‑1 (MQ=255) cATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTa < 2:4811784/140‑1 (MQ=255) cATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTa < 1:8916893/140‑1 (MQ=255) cAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAg < 1:8534146/140‑1 (MQ=255) aGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGcc > 2:4933777/1‑140 (MQ=255) aGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGcc > 2:2455727/1‑140 (MQ=255) aGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGcc > 2:4691686/1‑140 (MQ=255) gCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCg > 1:6853650/1‑140 (MQ=255) gCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCg > 1:5325369/1‑140 (MQ=255) ctAAATTGCGCAGTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGga < 2:7189007/139‑1 (MQ=255) aTAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGga < 1:4468398/140‑1 (MQ=255) aTAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGga < 1:6649518/140‑1 (MQ=255) aTAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACG‑c‑cc < 2:6447272/60‑1 (MQ=255) acattgcgcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGgaga < 1:7871128/138‑1 (MQ=255) aaaTTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGgaga < 1:10274095/140‑1 (MQ=255) aaTTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACG‑CACCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGATGTTTTTAAAGACGgagag > 2:8201654/1‑140 (MQ=255) attgcgcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACAGTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGgagaga < 2:5422059/140‑1 (MQ=255) gtgcgcagtgcgcCCCATGTAACGGGTGGTCATCTCAATCACAGTACGCACGCC‑CCGGGTCATCAGGTCGGTCATCTCCTGGCAAATGACCGCAGACTGATCAAGGCGGCGGTCCACGTTGTTTTTAACGCCGGAGAGAt < 2:2160747/139‑1 (MQ=255) gcgcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCa < 1:10798005/140‑1 (MQ=255) cgcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCaa > 2:8310700/1‑140 (MQ=255) cgcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCaa > 1:2160444/1‑140 (MQ=255) gcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCAGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAat > 2:8415376/1‑140 (MQ=255) ttgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATg < 2:9771437/140‑1 (MQ=255) ttgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATg < 1:4799232/140‑1 (MQ=255) tgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGc > 2:1718144/1‑140 (MQ=255) tgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGc > 2:569626/1‑140 (MQ=255) gcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCa > 2:10408152/1‑140 (MQ=255) cgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAg < 1:1494508/140‑1 (MQ=255) cgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAg < 2:2963592/140‑1 (MQ=255) cgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAAGGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAg < 2:2076902/140‑1 (MQ=255) ccccATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGAt < 1:3011990/140‑1 (MQ=255) ccccATGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGAt < 2:6795944/140‑1 (MQ=255) aTGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTc < 1:6144570/140‑1 (MQ=255) tGTAACGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCa < 1:3577746/140‑1 (MQ=255) aaCGGTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTTGCAAATGAACGCATACTGATCAAGGCGGCATTCCACTTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATgg > 1:7210714/1‑140 (MQ=255) ggTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCg < 2:5938015/140‑1 (MQ=255) ggTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCg < 1:6280479/140‑1 (MQ=255) gTTGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGa < 1:7458377/140‑1 (MQ=255) ttGGTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAg > 2:7318055/1‑140 (MQ=255) ggTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAggg > 1:5435791/1‑140 (MQ=255) ggTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCAGGGGCGAggg > 2:6285454/1‑140 (MQ=255) gTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGgt > 1:2471096/1‑140 (MQ=255) gTCATCTCAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGgt > 2:4223833/1‑140 (MQ=255) tCATCTCAATCACATTACGCACGCC‑CCGGGTAATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGgtg < 2:2600730/140‑1 (MQ=255) tcAATCACATTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAAcc > 1:867766/1‑140 (MQ=255) caTTACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGa > 1:10431984/1‑140 (MQ=255) ttACGCACGCC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCCATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATc > 2:7952494/1‑140 (MQ=255) acgcacgcC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCaa < 2:1009240/140‑1 (MQ=255) acgcacgcC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGAGTGTAACCCGTCGGATCaa < 2:1404069/140‑1 (MQ=255) cgcacgcC‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCaaa > 1:1640089/1‑140 (MQ=255) | CCACATGTTCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACG‑C‑CCGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCAAAA > NZ_CP025268/3508997‑3509270 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |