| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 400,598 | +G | pseudogene (162/260 nt) | iraP → | anti‑adapter protein IraP |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 400,594 | 1 | . | G | 99.2% | 891.7 / ‑1.0 | 261 | pseudogene (158/260 nt) | iraP | anti‑adapter protein IraP |
| Reads supporting (aligned to +/- strand): ref base . (1/1); new base G (161/97); total (162/99) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 286 total aligned reads displayed.
GAGTTGTTATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGA‑GGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCATAAAGT > NZ_CP025268/400455‑400728 | aGTTGTTATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTaga‑g > 2:4343766/1‑140 (MQ=255) ttgttATTTAAGCTTGCCCAAAAAGAAGAGGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGA‑ggg > 2:4963377/1‑140 (MQ=255) tgttATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGA‑ggg‑g > 2:4652280/1‑140 (MQ=255) gttATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGA‑ggg‑gg < 2:7480331/140‑2 (MQ=255) ttATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGA‑ggg‑ggc > 1:2230033/1‑138 (MQ=255) tATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGA‑ggg‑ggcg < 2:6504077/140‑4 (MQ=255) aGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTAc > 1:10251030/1‑140 (MQ=255) aGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTAc < 2:7907438/140‑1 (MQ=255) aGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTAc > 1:1146829/1‑140 (MQ=255) aGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTAc > 2:143046/1‑140 (MQ=255) aGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTAc > 2:5505219/1‑140 (MQ=255) gCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGt < 1:6735944/140‑1 (MQ=255) gCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGt > 1:9685051/1‑140 (MQ=255) gCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGt < 2:10006999/140‑1 (MQ=255) gCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGt > 2:676288/1‑140 (MQ=255) gCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGt > 1:10174699/1‑140 (MQ=255) gCCCAAAAAGAAGAAGAAACTATAGAACAGTGTGCACACTTAGAAGCTTTTGAGATAATCGTCACTGCAATGCTTCGCACTAAGCCTCAAAAAGAACAACAGCGGAAGATAGATCAGGAAGA‑GGGTGCGCTGAAAGAgga > 2:1912694/1‑139 (MQ=255) cccAAAAAGAAGAAGATTCGAAAGAACTGTGTGCGCAGGTAGAAGCTATGGAGATTATCGTCACAGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTa > 1:2751141/1‑140 (MQ=255) cccAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTa > 1:1357400/1‑140 (MQ=255) cccAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTa > 2:7092194/1‑140 (MQ=255) aaaGAAGAAGAGTCGAAAGATCTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGcc < 2:586342/140‑1 (MQ=255) aaaGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGcc < 1:9590427/140‑1 (MQ=255) gaagaGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGc < 1:1860730/140‑1 (MQ=255) aagaGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAATTGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGcc < 2:2358484/140‑1 (MQ=255) agTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGc > 2:5470564/1‑140 (MQ=255) gTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCa < 1:1039070/140‑1 (MQ=255) gAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTc > 2:302394/1‑140 (MQ=255) gAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTc > 2:9317421/1‑140 (MQ=255) gAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACAGCAATGCTACGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTc > 1:5740370/1‑140 (MQ=255) aaGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCt < 1:8696343/140‑1 (MQ=255) cTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTgacga < 1:4525215/140‑1 (MQ=255) cTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTgacga < 2:10876087/140‑1 (MQ=255) tgtgtgCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTgacgac > 1:6104061/1‑140 (MQ=255) tgtgtgCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTgacgac > 1:10093989/1‑140 (MQ=255) tgtgCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGAcgacga < 2:1846055/140‑1 (MQ=255) cgcAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACg > 1:5586472/1‑140 (MQ=255) gcAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACgg < 2:3250351/140‑1 (MQ=255) gcAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACgg > 1:3074015/1‑140 (MQ=255) tAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAgctg > 1:5353344/1‑140 (MQ=255) tAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAgctg < 1:1719637/140‑1 (MQ=255) tAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAgctg > 1:5196143/1‑140 (MQ=255) tAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAgctg > 1:5004933/1‑140 (MQ=255) tAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTAGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAgctg > 2:813973/1‑140 (MQ=255) tAGAAGCTTTGGAGATTATCGTAACTGAAATGCTTCGCAATATGGCGCTAAATGAACAACAGCGGTTGATTGATCAGGTATAGGGG‑GCGCTGTACGAGGTCAAGCCAGATGCCTGGATTCCTGACGTCGATACTGAgctg > 2:9048246/1‑140 (MQ=255) tAGAAGCTTTGGAGATTATATTCACTGAAATGATTAGAAATATGGCGCTAAATGACCAACAGCGGTTGATTGATCAGTTAGAGGGG‑GCGCTGTACGAGGTACAGCCCGATGCCAGCATTACTGACTACGATACGGAgctg > 2:705784/1‑140 (MQ=255) aGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCATGTAGAGGGG‑GCGCTTTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCtgctgc > 2:3862852/1‑140 (MQ=255) ttGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGa < 2:8511607/140‑1 (MQ=255) tGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAATCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGag > 2:8328058/1‑139 (MQ=255) tGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGAt > 2:10750840/1‑140 (MQ=255) tGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGAt > 1:71399/1‑140 (MQ=255) tGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGAt > 1:4897387/1‑140 (MQ=255) gaTTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACg > 2:3014340/1‑140 (MQ=255) tATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTaa < 2:7567958/140‑1 (MQ=255) cGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAaaga < 1:304785/140‑1 (MQ=255) cacaGCAAAGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATGGATCAGGTCGAGGGG‑GCGCTCTACGAGGGAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCAGCTGCGCGATTACGTAAAGAAGt > 2:2819498/1‑140 (MQ=255) aCTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGtg > 2:3131603/1‑139 (MQ=255) cAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTg < 2:6250045/140‑1 (MQ=255) aTGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGaa < 1:1573461/140‑1 (MQ=255) aTGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGaa < 2:587558/140‑1 (MQ=255) aTGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGaa < 2:2643066/140‑1 (MQ=255) tGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAg > 1:1177177/1‑140 (MQ=255) cTTCGTAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCa > 2:10455738/1‑140 (MQ=255) cTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCa > 1:796481/1‑140 (MQ=255) ttCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCa < 1:6506421/84‑1 (MQ=255) tCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATc < 1:10859974/140‑1 (MQ=255) cGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATcc > 2:5645784/1‑140 (MQ=255) cGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATcc > 1:4036035/1‑140 (MQ=255) cGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATcc > 2:9721917/1‑140 (MQ=255) atatGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGt < 1:2730773/140‑1 (MQ=255) tatGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCTTCCTCGTc > 1:9297601/1‑140 (MQ=255) tatGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTc < 1:4343766/140‑1 (MQ=255) cgcAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTaa > 2:1635586/1‑140 (MQ=255) cgcAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTaa > 1:839965/1‑140 (MQ=255) cgcAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTaa > 1:1461287/1‑140 (MQ=255) cgcAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTaa < 1:9078501/140‑1 (MQ=255) cgcAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTaa > 1:2408306/1‑140 (MQ=255) cgcAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTa > 1:3432982/1‑139 (MQ=255) aaaaTGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTaaaaa > 1:9453303/1‑140 (MQ=255) tGACCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTa > 1:359000/1‑140 (MQ=255) aCCAACAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAAt < 2:5196143/140‑1 (MQ=255) aaCAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCtt < 2:7674505/140‑1 (MQ=255) cAGCGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCtttt > 2:6671013/1‑140 (MQ=255) cGGTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCaa < 2:6102575/140‑1 (MQ=255) ggTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAAc < 2:2512985/140‑1 (MQ=255) gTTGATTGATCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACa > 1:5089606/1‑140 (MQ=255) ttgattgaTCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAg < 2:738024/140‑1 (MQ=255) ttgattgaTCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAg < 2:7802288/140‑1 (MQ=255) ttgattgaTCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAg < 1:708276/140‑1 (MQ=255) ttgattgaTCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAg < 2:4715848/140‑1 (MQ=255) ttgattgaTCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAg < 1:9489111/140‑1 (MQ=255) tgattgatCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGc < 1:4121040/140‑1 (MQ=255) gatCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCa < 1:813973/140‑1 (MQ=255) gatCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCa < 1:6383301/140‑1 (MQ=255) atCAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCAt > 1:588092/1‑140 (MQ=255) cAGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGAGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCATaa > 1:7762081/1‑140 (MQ=255) aGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCATaaa > 1:1172793/1‑140 (MQ=255) aGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCATaaa > 1:3845036/1‑140 (MQ=255) aGGTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCATaaa > 2:8851257/1‑140 (MQ=255) gTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCATAAAGt > 1:5272037/1‑140 (MQ=255) gTAGAGGGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCATAAAGt > 2:10657632/1‑140 (MQ=255) | GAGTTGTTATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGA‑GGG‑GCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCATAAAGT > NZ_CP025268/400455‑400728 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |