BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP025268	1292725 =	572 (0.900)	200 (0.370)	62/232	3.7	40.9%	intergenic (+182/+2)	narI/CXP41_RS06830	respiratory nitrate reductase subunit gamma/RtT sRNA
*	?	NZ_CP025268	= 1293258	93 (0.170)	200 (0.370)	62/232	3.7	40.9%	intergenic (‑44/+3)	CXP41_RS06840/CXP41_RS06845	RtT sRNA/tRNA‑Tyr
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 209 total aligned reads displayed.

TCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGCCGAACCTTAATCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGA  >  NZ_CP025268/1293119‑1293396

tCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGt                                                                                                                                            <  1:8636603/140‑1 (MQ=255)

 cGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTg                                                                                                                                           <  2:9469679/140‑1 (MQ=255)

 cGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCGTCTCATCCTTCCCCGCATGGGCCGAATATTTGATTGCGGCGTCGGGTGAGCGTGCAGGGACTTGTGAAAGTg                                                                                                                                           >  2:6848414/1‑140 (MQ=11)

  tcccTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGa                                                                                                                                          <  1:4019003/139‑1 (MQ=255)

  gCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGa                                                                                                                                          >  2:8042835/1‑140 (MQ=255)

  gCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGa                                                                                                                                          <  1:10336883/140‑1 (MQ=255)

  gCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGa                                                                                                                                          <  2:7638285/140‑1 (MQ=255)

  gCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGa                                                                                                                                          <  2:9411484/140‑1 (MQ=255)

    ccTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtg                                                                                                                                        <  1:8478422/140‑1 (MQ=255)

    ccTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATGCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtg                                                                                                                                        <  1:3129998/140‑1 (MQ=255)

    ccTTCGGGTCGGTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtg                                                                                                                                        <  2:8971073/140‑1 (MQ=255)

    ccTTCGGGTCGGTGCCTGCGGCAACGCTCTCGCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTGCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtg                                                                                                                                        <  2:9339200/140‑1 (MQ=11)

     cTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGTCGCTCTAGTCGAACCTTTGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtgg                                                                                                                                       <  1:1753104/140‑1 (MQ=11)

     cTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGTCGCTCTAGACGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtgg                                                                                                                                       <  2:2894395/140‑1 (MQ=11)

     cTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtgg                                                                                                                                       <  1:9228866/140‑1 (MQ=255)

      ttCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGTCGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggt                                                                                                                                      <  2:4332244/140‑1 (MQ=255)

      ttCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggt                                                                                                                                      <  2:4906569/140‑1 (MQ=255)

      ttCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggt                                                                                                                                      <  1:3803906/140‑1 (MQ=255)

       tCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATCTTTGATGGCGGATTCGCGTGCGAGTTCAGGGACTTTTGAAAGTGAggggg                                                                                                                                     >  2:10776780/1‑138 (MQ=11)

       tCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtg                                                                                                                                     <  1:3640022/140‑1 (MQ=255)

        cGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtgg                                                                                                                                    <  2:7445819/140‑1 (MQ=255)

         tgttCGTTGCCTGCGGCAACGCTCTCTCGCTGTCGCTCTAGGCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtggt                                                                                                                                   <  1:5158958/137‑1 (MQ=11)

         gggTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCATAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtggt                                                                                                                                   <  1:3115099/140‑1 (MQ=255)

         gggTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtggt                                                                                                                                   <  1:6715700/140‑1 (MQ=255)

         gggTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtggt                                                                                                                                   <  1:4288492/140‑1 (MQ=255)

         gggTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtggt                                                                                                                                   <  1:10443782/140‑1 (MQ=255)

            tCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggg                                                                                                                                <  1:6495817/140‑1 (MQ=255)

              gtggCCCGCGGCACCGCTCTCGCGCTGCCCCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGAGTGCGGCTTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  2:8631081/137‑1 (MQ=11)

              gtcgCCCGCGGCAACGCTCTCTCGCTGTNGCTCGAGCCGAACCTTAGTCGAAGCTTCTCTTACTTCCGCGGTTGGGCAGAATTTTTGATTGCGGATTCGCTTGAGAGTTCCGGTACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  1:5880433/137‑1 (MQ=11)

              gTTGCCTGCGGCTACGCTCTCTCGCTGAAGCTCGCGCCGAACCTTAGTCGAAGCTTCTCATCCGTCCCCGCATGGGCAGAATATTTGATTGCGTATTCGATTGAGAGTTCAGTGACTTTTGCAAGTGATGGTGGTggggg                                                                                                                              <  1:1833481/140‑1 (MQ=11)

              gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGCGCCGAACCTTAGTCGAAGCGTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  1:6126562/140‑1 (MQ=255)

              gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  1:6340732/140‑1 (MQ=255)

              gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  1:2698365/140‑1 (MQ=255)

              gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  1:7619932/140‑1 (MQ=255)

              gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCAACCTTCCCCGCATGGGGCGAAAATTGGATTGCGGATGCGCGTGAGAGATCCGGGAAGTTTGCATCTGGTGGTGGTggggg                                                                                                                              >  2:7366909/1‑140 (MQ=11)

                   cTGCGGCAACGCTCTCTCGCTGTCGCTCTAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGa                                                                                                                         <  1:8229297/140‑1 (MQ=255)

                   cTGCGGCAACGCTCTCTCGCTGACGCTCGAGTCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGa                                                                                                                         <  2:9825609/140‑1 (MQ=255)

                   cTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGa                                                                                                                         <  2:7515309/140‑1 (MQ=255)

                   cTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGa                                                                                                                         <  1:3451968/140‑1 (MQ=255)

                   cTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCGTCTCCTCCGTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGa                                                                                                                         <  2:2251563/140‑1 (MQ=11)

                   cTGCGGCAACGCTATCTCTCTTACGGTCTAGCCGAACGTTTTTCGTAGTTTATCATCCTTCACCGCTTTGGCAGAATAATTGATTGCGGATTCGCTTGAGTTTTAAGGGAATTTTGAAAGTGATGGTGGTGGGGGAAGGa                                                                                                                         <  1:10572551/140‑1 (MQ=2)

                   cTGCGGCAACGCACTCTCTCTGACGCTCGAGCCGAACCGTTGTCGTAGCTTCTCATCCTTCCCCGCATGGGCAGAATAATTGATTGCGGATTCGCTTGAGAGTTCATGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGa                                                                                                                         <  2:4185288/140‑1 (MQ=11)

                     gCGGCAACGCTCTCTCGCATTCGCTCGATCCGAACCTTATTCGAATCTTCACAACCATCCCCCCAAGAGCCAAATATTTGATTGCGGAATCTCTTGAGAGTTCAGGGACATTTTAAAGTGATGGTGTGGGGGGAAGGAtt                                                                                                                       >  2:8802389/1‑140 (MQ=2)

                      cGGCAACGCTCTCTCGCAGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATACTTACCCGCATGGGCAGAATATTTGATTGCGGATTAGCTTGAGAGTTAAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGAtta                                                                                                                      >  1:7745445/1‑139 (MQ=11)

                        gCAACGCTCTCTCGCTGACGCTCGCGCCGAAGCTGTGTCGCTGCTTCTCATCCGTGCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCCGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGAttact                                                                                                                    <  2:7144149/140‑4 (MQ=1)

                        gCAACGCTCTCGCGCTGCCGCTCGAGCCGAACCGAAGTCGAAGCTTCTCCTCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGAttact                                                                                                                    <  2:10298323/140‑4 (MQ=11)

                         cAACGCTCTCTCGCTGTCGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGAttactc                                                                                                                   <  2:5219409/140‑5 (MQ=255)

                         cAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCAGGGGCCGAATATTTGATTGCGGATTCGCGTGCGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGAttactc                                                                                                                   >  2:2454978/1‑136 (MQ=11)

                          aaCGCTCTCTCGCTGACGCTCGAGCCGAACCTTCGTCGAAGATTCTCATCCTTCCCCGCATGGGCAGAATTTTTTATTGCGGATTCGCTTGAGAGTTCATGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGAttactca                                                                                                                  <  1:2092850/140‑6 (MQ=11)

                           aCGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGAttactcag                                                                                                                 <  1:8402146/140‑7 (MQ=255)

                            cGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATCTTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGTAAGTGATGGGGGTGGGGGAAGGAttactcagc                                                                                                                >  1:8588884/1‑133 (MQ=11)

                            cGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGAttactcagc                                                                                                                >  1:9059140/1‑133 (MQ=255)

                            cGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGGGGTGGGGGAAGGAttactcagc                                                                                                                >  1:4687600/1‑133 (MQ=11)

                                       tGGCGCTCAAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGTTTGAGAATTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  2:6365428/115‑1 (MQ=11)

                                             tCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGa                                                                                                                         <  2:3762486/114‑1 (MQ=255)

                                                           ggtCGAAGCTTCTCATCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGTTTGAGAATTCCGGGGCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTAGAAACATCGAAGACGATGACGGAAGATTTACAGTCtt                                                                                 >  2:5494042/3‑139 (MQ=14)

                                                                      ctcATCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGTTTGTGAGTTCCGGGGCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTAGAAACTTCGTAGGCGATCACGGAAGATTTACTGTCTGCTCCCTTAgga                                                                      >  1:10787651/1‑139 (MQ=14)

                                                                      ctcATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              >  2:8372215/1‑84 (MQ=255)

                                                                                       gggCAGAAGATTTGATGGCGGATTCGTTGGAGAATTCCGGGGCTTTTGCACGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGACTGCTCCCATTGGCCGCTCGGGAACCccacc                                                     <  1:1589667/140‑1 (MQ=17)

                                                                                          cAGAATATTTGATTGCTGATTCGTTTGTGAATTCCGTGTCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCccaccacg                                                  <  2:3846781/140‑3 (MQ=17)

                                                                                             aaTATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGt                                               <  2:5156676/140‑1 (MQ=255)

                                                                                                         cGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACATTAATATACCTATGGACTCTCGGGAACCCCACCAGTGCTAATTCAAAtttg                                   >  2:3621951/1‑139 (MQ=18)

                                                                                                                 tttggaagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAAt                           <  2:5976347/134‑1 (MQ=255)

                                                                                                                 ttgggtagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAAt                           <  1:1016866/134‑1 (MQ=255)

                                                                                                                 ttgggaagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAAt                           <  1:9305132/134‑1 (MQ=255)

                                                                                                                 ttgggaagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAAt                           <  2:4779213/134‑1 (MQ=255)

                                                                                                                 ttgggaagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAAt                           <  2:10316518/134‑1 (MQ=255)

                                                                                                                    gttagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCt                        <  2:1051962/137‑1 (MQ=255)

                                                                                                                    ggaagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCt                        <  1:9941120/137‑1 (MQ=255)

                                                                                                                        gTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTgat                    <  1:2528714/140‑2 (MQ=255)

                                                                                                                         ttCATGTACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGACCCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTgaga                   <  2:593862/140‑1 (MQ=255)

                                                                                                                         ttCAGGGCCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTgaga                   <  1:5474940/140‑1 (MQ=255)

                                                                                                                         ttCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTgaga                   <  2:3113864/140‑1 (MQ=255)

                                                                                                                         ttCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTgaga                   <  2:8798683/140‑1 (MQ=255)

                                                                                                                         ttCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTgaga                   <  1:628452/140‑1 (MQ=255)

                                                                                                                         ttCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTgaga                   <  1:9392258/140‑1 (MQ=255)

                                                                                                                          tccggggCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCATCGAAGTCGATGACGGCAGATTTACATTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCACATTTTGATGTAATGCTTgagag                  >  2:3923681/4‑139 (MQ=18)

                                                                                                                           ctgggACTTTTGTAAGTGATGGTGGTGTGGGAAGTATTCGAACCTTCGAAGTCGATGACGTCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAAACCCACCAGGGGTAATTCAAATTTTGATGTAATGCTTGAGAtg                 <  2:1279639/138‑1 (MQ=18)

                                                                                                                           ccggggCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAtg                 <  2:10692881/138‑1 (MQ=255)

                                                                                                                           cAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGTCAGATTTAAACACATCTCACTATGCCCTCTACTGAAAACCACAAGTTGTAATTCAAATTTTGAGGTAAAGCTTGAGAtg                 >  2:1703719/1‑140 (MQ=16)

                                                                                                                            aGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAtgg                <  2:2697173/140‑1 (MQ=255)

                                                                                                                               gACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAtggtgg             <  1:9820230/140‑1 (MQ=255)

                                                                                                                                aCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAtggtggt            <  1:887642/140‑1 (MQ=255)

                                                                                                                                aCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTGTGAGGTAAAGCTAGAGAagggcga            >  1:3407478/1‑136 (MQ=18)

                                                                                                                                  ttttGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAtggtggtgg          <  2:8294363/140‑1 (MQ=255)

                                                                                                                                   tttGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGTGGTAATGCTTGAGATGGTGGTggg         >  1:10871600/1‑140 (MQ=255)

                                                                                                                                   tttGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTggg         >  1:9583681/1‑140 (MQ=255)

                                                                                                                                   tttGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTggg         <  1:8492454/140‑1 (MQ=255)

                                                                                                                                   tttGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTggg         >  2:4666218/1‑140 (MQ=255)

                                                                                                                                   tttGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTAGAGGTCATGGGTGAGATGGTGGTggg         >  1:1283365/1‑140 (MQ=255)

                                                                                                                                   tttGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCACTTAGTCAGCTCTGGAACACCACCCGGGGAAATTCATATTTTGAGGTAATGCTTGAGATGGTGGTggg         >  2:1379534/1‑140 (MQ=21)

                                                                                                                                     tgctcgTGATGGTGGTGTGGGAAGGATTCGAACCTTCGAAGTCGATGCCGGCAGATTTCCCGTCTTCTCCCTTTGGCCGCTCGGTAACACACCCAGGGGTAATTCAAATTTTGATGTAATGCTTGAGATGGTGGTggggg       <  1:2801561/135‑1 (MQ=18)

                                                                                                                                     tGAAAGTGTTGGGGGGGGGGGAAGGATTAGAACCTTCGAAGTCGATGACGGCATATTTACAGTCGTCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGTGGTAATGCTTGAGATGGTGGTggggg       <  1:6439242/140‑1 (MQ=21)

                                                                                                                                     tGAAAGTGATGGTGGTGGGGGCAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTggggg       <  1:7022538/140‑1 (MQ=255)

                                                                                                                                     tGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTggggg       <  1:2854512/140‑1 (MQ=255)

                                                                                                                                     tGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTggggg       <  2:6071306/140‑1 (MQ=255)

                                                                                                                                     tGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTggggg       <  1:977673/140‑1 (MQ=255)

                                                                                                                                     tGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTggggg       <  1:10007015/140‑1 (MQ=255)

                                                                                                                                         aGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAgg   >  2:348343/1‑140 (MQ=255)

                                                                                                                                          gTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGa  <  1:5086848/140‑1 (MQ=255)

TCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGCCGAACCTTAATCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGA  >  NZ_CP025268/1293119‑1293396

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.