New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP025268 = 37433240 (0.000)360 (0.570) 90/272 2.3 100% intergenic (‑100/‑82) yiaJ/galK IclR family transcriptional regulator YiaJ/galactokinase
?NZ_CP025268 3744556 = 0 (0.000)intergenic (+2/‑99) galK/yiaK galactokinase/3‑dehydro‑L‑gulonate 2‑dehydrogenase

Only 100 of 362 total aligned reads displayed.

GCTGTATCGTCGCGCTGATCCCGGAAGAGCTGGTGCCTGCCGTACAGCAAGCTGTCGCTGAACAATATGAAGCAAAAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAGCAGCCTTTAATCG  >  NZ_CP025268/3744418‑3744695
                                                                                                                                          |                                                                                                                                           
tctcgttctctttttttcccatcacttctttccccattttgtcgcgtcctgatggtagcgcaaagtgtgccgtagttcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAg                                                                                                                                            >  1:9664370‑M2/139‑140 (MQ=255)
     ttctctttttttcccatcacttctttccccattttgtcgcgtcctgatggtagcgcaaagtgtgccgtagttcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGc                                                                                                                                       >  2:6566436‑M2/134‑140 (MQ=255)
      tctctttttttcccatcacttctttccccattttgtcgcgtcctgatggtagcgcaaagtgtgccgtagttcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGcc                                                                                                                                      <  2:3030946‑M2/8‑1 (MQ=255)
      tctctttttttcccatcacttctttccccattttgtcgcgtcctgatggtagcgcaaagtgtgccgtagttcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGcc                                                                                                                                      <  1:7012851‑M2/8‑1 (MQ=255)
      tctctttttttcccatcacttctttccccattttgtcgcgtcctgatggtagcgcaaagtgtgccgtagttcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGcc                                                                                                                                      <  1:4923000‑M2/8‑1 (MQ=255)
      tctctttttttcccatcacttctttccccattttgtcgcgtcctgatggtagcgcaaagtgtgccgtagttcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGcc                                                                                                                                      <  1:2588918‑M2/8‑1 (MQ=255)
      tctctttttttcccatcacttctttccccattttgtcgcgtcctgatggtagcgcaaagtgtgccgtagttcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGcc                                                                                                                                      <  1:1158043‑M2/8‑1 (MQ=255)
                tcccatcacttatttccccattttgtcgcgtcctgttggtagcgcttagtgtgccgtagttcacgatctcgacagattttttataacctattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTaaaaa                                                                                                                            <  2:9235318‑M2/18‑1 (MQ=255)
                 cccatcacttctttccccattttgtcgcgtcctgatggtagcgcaaagtgtgccgtagttcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAg                                                                                                                           <  2:1431413‑M2/19‑1 (MQ=255)
                  ccatcacttctttccccattttgtcgcgtcctgatggtagcgcaaagtgtgccgtagttcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGt                                                                                                                          >  1:4134036‑M2/121‑140 (MQ=255)
                    atcacttctttccccattttgtcgcgtcctgatggtagcgcaaagtgtgccgtagttcacgatctcgaccgataatttataaccaattgagttttatgtcttttgaaattcatcaatcAGATTGCCTTGTGAAAAAGTGa                                                                                                                        >  2:9378512‑M2/119‑140 (MQ=255)
                    atcacttctttccccattttgtcgcgtcctgatggtagcgcaaagtgtgccgtagttcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGcc                                                                                                                                      >  2:10161095‑M2/119‑126 (MQ=255)
                     tcacttctttccccattttgtcgcgtcctgatggtagcgcaaagtgtgccgtagttcacgatctcgacagataatttataaccaattgatttttatgtcttttgagattcatcaatcAGATTGCCTTGTTAAAAAGTGAt                                                                                                                       <  1:1499906‑M2/23‑1 (MQ=255)
                     tcacttctttccccattttgtcgcgtcctgatggtagcgcaaagtgtgccgtagttcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGAt                                                                                                                       <  1:6834591‑M2/23‑1 (MQ=255)
                     tcacttctttccccattttgtcgcgtcctgatggtagcgcaaagtgtgccgtagttcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGAt                                                                                                                       <  2:5695075‑M2/23‑1 (MQ=255)
                     tcacttctttccccattttgtcgcgtcctgatggtagcgcaaagtgtgccgtagttcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGAt                                                                                                                       <  1:569942‑M2/23‑1 (MQ=255)
                     tcacttctgtccccattttgtcgcgtccggatggtagcgcaaagtgtgccgtagttcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAACAGTGAt                                                                                                                       <  2:4773664‑M2/23‑1 (MQ=255)
                         ttctttccccattttgtcgcgtcctgatggtagcgcaaagtgtgccgtagttcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGat                                                                                                                   <  1:8202558‑M2/27‑1 (MQ=255)
                          tctttccccattttgtcgcgtcctgatggtagcgcaaagtgtgccgtagttcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGata                                                                                                                  <  1:7993463‑M2/28‑1 (MQ=255)
                           ctttccccattttgtcgcgtcctgatggtagcgcaaagtgtgccgtagttcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGatat                                                                                                                 >  2:6914283‑M2/112‑140 (MQ=255)
                             ttccccattttgtcgcgtcctgatggtagcgcaaagtgtgccgtagttcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGatatat                                                                                                               <  1:9445962‑M2/31‑1 (MQ=255)
                                   attttgtcgcgtcctgatggtagcgcaaagtgtgccgtagttcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGaaa                                                                                                         >  1:2711062‑M2/104‑140 (MQ=255)
                                   attttgtcgcgtcctgatggtagcgcaaagtgtgccgtagtacacgatctcgacagataatttataaccaattgatttttatgtcgtttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGAGATATTTGaaa                                                                                                         >  2:6149081‑M2/104‑140 (MQ=255)
                                    ttttgtcgcgtcctgatggtagcgcaaagtgtgccgtagttcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAAt                                                                                                        <  1:6082646‑M2/38‑1 (MQ=255)
                                      ttgtcgcgtcctgatggtagcgcaaagtgtgccgtagttcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCa                                                                                                      >  1:8174545‑M2/101‑140 (MQ=255)
                                            cgtcctgatggtagcgcaaagtgtgccgtagttcacgatctcgacagataaattataaccaattgattattatttcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATAAAGTTTc                                                                                                >  1:8376503‑M2/95‑140 (MQ=255)
                                                   atggtagcgcaaagtgtgccgtagttcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATAtt                                                                                         >  2:7614492‑M2/88‑140 (MQ=255)
                                                    tggtagcgcaaagtgtgccgtagttcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTg                                                                                        <  2:3810605‑M2/54‑1 (MQ=255)
                                                        agcgcaaagtgtgccgtagttcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAAt                                                                                    >  1:4510733‑M2/83‑140 (MQ=255)
                                                        agcgcaaagtgtgccgtagttcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAAt                                                                                    >  1:7884354‑M2/83‑140 (MQ=255)
                                                        agcgcaaagtgtgccgtagttcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAAt                                                                                    >  1:627965‑M2/83‑140 (MQ=255)
                                                        agcgcaaagtgtgccgtagttcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAAt                                                                                    >  2:2007985‑M2/83‑140 (MQ=255)
                                                          cgcaaagtgtgccgtagttcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAATTAGTGATCGATATATTTGAAATCTAGTTTCGCTTATTGAaatgt                                                                                  >  2:6290549‑M2/81‑138 (MQ=255)
                                                            caaagtgtgccgtagttcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTa                                                                                <  2:10492405‑M2/62‑1 (MQ=255)
                                                                 tgtgccgtagttcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCa                                                                           >  1:5293182‑M2/74‑140 (MQ=255)
                                                                 tgtgccgtagttcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCa                                                                           >  2:287957‑M2/74‑140 (MQ=255)
                                                                   tgccgtagttcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCaaa                                                                         >  2:1151746‑M2/72‑140 (MQ=255)
                                                                   tgccgtagttcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCaaa                                                                         >  1:6328062‑M2/72‑140 (MQ=255)
                                                                   tgccgtagtgcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCaaa                                                                         >  1:10240522‑M2/72‑140 (MQ=255)
                                                                         agttcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCg                                                                   <  2:1812603‑M2/75‑1 (MQ=255)
                                                                          gttcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGa                                                                  >  1:6478026‑M2/65‑140 (MQ=255)
                                                                           ttcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGcc                                                                                                                                      >  2:10806129‑M2/64‑71 (MQ=255)
                                                                           ttcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGAt                                                                 >  2:3292553‑M2/64‑140 (MQ=255)
                                                                           ttcacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGAt                                                                 >  2:10067420‑M2/64‑140 (MQ=255)
                                                                             cacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCa                                                               >  2:5151004‑M2/62‑140 (MQ=255)
                                                                             cacgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCa                                                               >  1:6642430‑M2/62‑140 (MQ=255)
                                                                              acgatctcgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCaa                                                              <  2:8776917‑M2/80‑1 (MQ=255)
                                                                                     cgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACa                                                       >  1:10805011‑M2/54‑140 (MQ=255)
                                                                                     cgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACa                                                       >  2:522803‑M2/54‑140 (MQ=255)
                                                                                     cgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACa                                                       <  1:10013923‑M2/87‑1 (MQ=255)
                                                                                     cgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACa                                                       >  1:10455729‑M2/54‑140 (MQ=255)
                                                                                     cgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACa                                                       >  1:9776263‑M2/54‑140 (MQ=255)
                                                                                     cgacagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACa                                                       >  2:343797‑M2/54‑140 (MQ=255)
                                                                                       acagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATNAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAg                                                     <  1:10139172‑M2/89‑1 (MQ=255)
                                                                                       acagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAg                                                     <  1:771352‑M2/89‑1 (MQ=255)
                                                                                       acagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAg                                                     <  1:3739317‑M2/89‑1 (MQ=255)
                                                                                       acagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAg                                                     <  1:7299317‑M2/89‑1 (MQ=255)
                                                                                       acagataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGAGTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAg                                                     <  2:2616535‑M2/89‑1 (MQ=255)
                                                                                         agataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGa                                                   <  1:2926631‑M2/91‑1 (MQ=255)
                                                                                          gataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGaa                                                  >  2:4405188‑M2/49‑140 (MQ=255)
                                                                                          gataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGaa                                                  >  2:3971703‑M2/49‑140 (MQ=255)
                                                                                           ataatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAATAGCGATCAAAAAAACAAGGAAg                                                 >  2:5610629‑M2/48‑140 (MQ=255)
                                                                                             aatttataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGcc                                               <  1:897835‑M2/95‑1 (MQ=255)
                                                                                             aatttataaccaattgaattttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGcc                                               <  1:10594527‑M2/95‑1 (MQ=255)
                                                                                                 tataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTggg                                           <  2:8649214‑M2/99‑1 (MQ=255)
                                                                                                 tataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTggg                                           <  1:522658‑M2/99‑1 (MQ=255)
                                                                                                  ataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGa                                          <  1:923941‑M2/100‑1 (MQ=255)
                                                                                                  ataaccaattgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGACAAAAAAGCGAACAAAAAAACAAGGAAGCCTGGGa                                          >  2:161023‑M2/41‑140 (MQ=255)
                                                                                                         attgatttttatgtcttttgaaattcatcaatcAGa                                                                                                                                           <  1:8643613‑M2/3‑1 (MQ=255)
                                                                                                         attgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCTTATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGt                                   <  1:10771170‑M2/107‑1 (MQ=255)
                                                                                                         attgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGt                                   <  2:4120830‑M2/107‑1 (MQ=255)
                                                                                                         attgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGt                                   >  2:9907652‑M2/34‑140 (MQ=255)
                                                                                                         attgatttttatgncttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGt                                   >  1:9404768‑M2/34‑140 (MQ=255)
                                                                                                          ttgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAgtt                                  >  2:1894565‑M2/33‑139 (MQ=255)
                                                                                                          ttgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTg                                  >  1:3054272‑M2/33‑140 (MQ=255)
                                                                                                           tgatttttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGa                                 <  1:2218830‑M2/109‑1 (MQ=255)
                                                                                                           tgatttttatgtcttttgaaagtcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGa                                 <  1:3681957‑M2/109‑1 (MQ=255)
                                                                                                                tttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACAttt                            <  2:2826454‑M2/114‑1 (MQ=255)
                                                                                                                 ttatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTg                           >  1:7406336‑M2/26‑140 (MQ=255)
                                                                                                                  tatgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGa                          >  1:2830126‑M2/25‑140 (MQ=255)
                                                                                                                   atgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAg                         <  2:10764908‑M2/117‑1 (MQ=255)
                                                                                                                   atgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAg                         <  1:4680866‑M2/117‑1 (MQ=255)
                                                                                                                   atgtcagttgacatgcatcaatcAGAGTGCCTTGTTAAAAAGTGAGCGATATATTTGACATCAAGTGTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAACAACAAGGAAGCCTGGGATGAAAGTGACATTTGAg                         <  2:8181598‑M2/117‑1 (MQ=255)
                                                                                                                    tgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCg                                                                   <  1:6666696‑M2/75‑1 (MQ=255)
                                                                                                                    tgtcttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCg                                                                   >  2:6666696‑M2/23‑97 (MQ=255)
                                                                                                                       cttttgaaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGt                     >  2:7058007‑M2/20‑140 (MQ=255)
                                                                                                                             aaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAag               <  2:9623411‑M2/127‑1 (MQ=255)
                                                                                                                             aaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAag               <  1:8102198‑M2/127‑1 (MQ=255)
                                                                                                                             aaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAag               <  1:1319093‑M2/127‑1 (MQ=255)
                                                                                                                             aaattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAag               <  2:1512068‑M2/127‑1 (MQ=255)
                                                                                                                              aattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAagc              <  2:2275128‑M2/128‑1 (MQ=255)
                                                                                                                              aattcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAagc              <  1:6163937‑M2/128‑1 (MQ=255)
                                                                                                                               attcatcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAagca             <  2:7257206‑M2/129‑1 (MQ=255)
                                                                                                                                  catcaatcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAGCAGcc          >  2:5522649‑M2/9‑140 (MQ=255)
                                                                                                                                       atcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAGCAGCCTTTaa     >  1:10866915‑M2/4‑140 (MQ=255)
                                                                                                                                        tcAGATTGCCTTGTTAAAAAGTTATCGATATATTTGAAATCAAGTTTCGCATTTTGAAATTTTAAGCCAAAAAAGCGATCATAAAAACAAGGAAGCCTGGGATGTAAGTGACATTTGAGCAGTTACAAGCAGCCTTTAAt    <  2:8322621/139‑1 (MQ=255)
                                                                                                                                        tcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAGCAGCCTTTAAt    <  1:3292553‑M2/138‑1 (MQ=255)
                                                                                                                                        tcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAGCAGCCTTTAAt    <  1:4026579‑M2/138‑1 (MQ=255)
                                                                                                                                        tcAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAGCAGCCTTTAAt    <  1:1596920‑M2/138‑1 (MQ=255)
                                                                                                                                        tcAGATAGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCAGATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAGCAGCCTTTAAt    >  2:4640370‑M2/3‑140 (MQ=255)
                                                                                                                                          |                                                                                                                                           
GCTGTATCGTCGCGCTGATCCCGGAAGAGCTGGTGCCTGCCGTACAGCAAGCTGTCGCTGAACAATATGAAGCAAAAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGACAGATTGCCTTGTTAAAAAGTGATCGATATATTTGAAATCAAGTTTCGCATATTGAAATTTTAAGCCAAAAAAGCGATCAAAAAAACAAGGAAGCCTGGGATGAAAGTGACATTTGAGCAGTTAAAAGCAGCCTTTAATCG  >  NZ_CP025268/3744418‑3744695

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.