Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0252682,233,2480GC25.2% 444.0 / 108.1 215intergenic (+148/+225)yohP/dusCsmall membrane protein YohP/tRNA dihydrouridine(16) synthase DusC
Reads supporting (aligned to +/- strand):  ref base G (67/93);  new base C (54/0);  total (121/94)
Fisher's exact test for biased strand distribution p-value = 5.13e-17
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 216 total aligned reads displayed.

TGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAAC  >  NZ_CP025268/2233111‑2233386
                                                                                                                                          |                                                                                                                                           
tGTCATCAGGACCGAAAAGCACGAGAATATTTCAGTCACTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCCCTGGCGCAAGGAGCGC‑GCAGGGGGCGGCCACTCGCCGCCGCCCCCTGCACCCCCggg                                                                                                                                           <  2:392347/140‑1 (MQ=25)
    atcaGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGATCGC‑GCAGGGGGCGGCCCATAGCCGCCGCCCCCTGCACCCCCGGGcact                                                                                                                                       >  2:6041375/1‑140 (MQ=255)
         gTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGGGGGCAAACGCCGCCGCCCCCGGCACCCCCGGGCTCTGGC‑Ga                                                                                                                                 >  2:5212581/1‑140 (MQ=255)
           ccGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAAc                                                                                                                               <  2:9252105/140‑1 (MQ=255)
            cGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCTTTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAAcc                                                                                                                              >  2:8307173/1‑139 (MQ=255)
            cGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GGGGGGGGGGGGCCAACACCCCCCCCCCCACCACCCCCCGGCGCCGGG‑GAACa                                                                                                                              >  1:5397508/1‑140 (MQ=25)
            cGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGGCCCATAGCCGCCGCCCCCAGCACCCCCCGGCTCTGGC‑GAACa                                                                                                                              >  2:10227605/1‑140 (MQ=255)
            cGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGGCCCAACGCCGCCGCCCCCAGCACCCCCCGGCTCTGGC‑GAACa                                                                                                                              >  2:10337700/1‑140 (MQ=255)
              aaaaTAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTGCATATAATCACTGGCGCAAGGAGCGC‑GCCGGGGGCGGCCCATAGCCGCCGCCCCCAGCACCCCCCGGCTCTGGC‑GAACaaa                                                                                                                            >  2:2551588/1‑140 (MQ=25)
                   aaCGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCCGGGGGCGGCCCATCGCCGCCGCCCCCAGCCCCCCCGGGCTCTGGC‑GAACaaaaaagc                                                                                                                       >  2:5415490/1‑136 (MQ=25)
                    aCGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GGGGGGGGGGGCCCAACGCCGCCCCCCCCACCCCCCCCCCGCACAGGCGGAACaaaaaccc                                                                                                                       >  1:4502308/1‑136 (MQ=255)
                            atTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGGGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCTGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGcgcg                                                                                                              <  1:8527731/140‑1 (MQ=255)
                             tttCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATACTCACTGGCGCAAGGAGCGC‑GCAGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCgg                                                                                                             <  2:3625846/140‑1 (MQ=255)
                                  gTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGccc                                                                                                        <  1:10427357/140‑1 (MQ=255)
                                   tctctcATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGGCCCATCGCCGCCGCCCCCAGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCt                                                                                                       >  2:9836804/1‑140 (MQ=255)
                                   tctctcATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGGCCCATAGCCGCCCCCCCCAACACCCCCCGGCGCAGGG‑GAAAAAAAAAACCCCAGCGCGGGGcccg                                                                                                       >  2:4182126/1‑139 (MQ=18)
                                   tctctcATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGGCCAAAAGCCCCCGCCCCCAGCACCCCCCGGCTCAGGC‑GAACAAAAACGCCGCAGCGCGGTGccca                                                                                                       >  2:4630999/1‑139 (MQ=18)
                                   tctctcATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGGCCAAAAGCCCCCCCCCCCAGCACCCCCCCGCACATGC‑GAACAAAAAAGCCCCAGCGCGGTGgcca                                                                                                       >  2:3425181/1‑139 (MQ=18)
                                     tctcATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCCGGGGGCGGCCAAAACCCCCCCCCCCCAGCACCCCCCGGCACAGGC‑GAACAAAAAAGCCGCAGCGCCGTGcccacc                                                                                                     >  1:10870095/1‑137 (MQ=18)
                                      ctcATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGGCCAAACGCCCCCGCCCCCAGCCCCCCCCCGCACATGC‑GAACAAAAACGCCCCAGCCCCGTGcccaacg                                                                                                    >  2:3211966/1‑136 (MQ=18)
                                       tcATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGc                                                                                                   <  1:4182126/140‑1 (MQ=255)
                                        cATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCCGGCTCTGGC‑GAACAAAAAAGCCGCGGCGCGGTGCCCACGGcg                                                                                                  >  2:2816325/1‑139 (MQ=18)
                                         aTCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCtt                                                                                                 <  2:1505567/140‑1 (MQ=255)
                                          tCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTa                                                                                                <  2:7250323/140‑1 (MQ=255)
                                           ccTGTTGCGCTCCTGTCATGTGCATTGCTGCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGGCCAATCGCCGCCGCCCCCAGCACCCCCGGGCTCTTGC‑GAACAAAATCCCCGCTGCGCGGTGCCCTCGGCTTAt                                                                                               >  2:606807/1‑140 (MQ=255)
                                              gTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCATGGGGCGGCCAATACCCGCCGCCCCCAGCACCCCCCGGCTCTGGC‑GAACAAAAAAGCCGCATCGCGGTGCCCACGGCGTAAccc                                                                                            >  2:10601076/1‑140 (MQ=18)
                                               ttGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GGCTGGGGCGGGCAAACGCCCCCGCCCCCAGCACCCCCCCGCGCTGGC‑GAACAAAAAAGCCGCTGCCCCGGGGCCACGGCGTAGccca                                                                                           >  1:9195256/1‑139 (MQ=255)
                                               ttGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGGCCAAAAGCCCCCGCCCCCATCACCCCCCCGCACTTGC‑GAACAAAAACGCCCCTGCGCGGTGCCCACGGCTTATccca                                                                                           >  2:6447351/1‑139 (MQ=18)
                                               ttGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGGCCAAAAGCCCCCCCCCCCAGCACCCCCCGGCGCATGC‑GAACCAAAAAGCCGCTGCGCGGTGGCCCCGGCCTATacca                                                                                           >  2:4536818/1‑139 (MQ=18)
                                                 gcgcTCCTGTCATGTGCTGTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCTGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTa                                                                                         <  1:10601076/140‑1 (MQ=255)
                                                  cgcTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTAc                                                                                        <  1:3204660/140‑1 (MQ=255)
                                                    cTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGTGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACgg                                                                                      <  1:2051628/140‑1 (MQ=255)
                                                    cTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGAAAGTAGCTC‑GCAGGGGGCGGCCAAACCCCGCCGCCCCCATCACCCCCGGGCTCAGGC‑GAACAAAAACGCCGCTGCGCGCTTCCCACGGCTTATCACATACgg                                                                                      >  2:10109608/1‑140 (MQ=255)
                                                         gTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGGCCAATCGCCGCCGCCCCCGGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGGCCTCCGCTTATCCCGTAAGGCTAcc                                                                                 >  2:10400506/1‑140 (MQ=17)
                                                            ttgtgCATTGCTTCTTTTAATCACTGGCGCATGGTGCGC‑GGTGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTTCCggg                                                                              <  1:3051614/139‑1 (MQ=14)
                                                               tgCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGGCGGGGGGGGGCCAAACG‑CGCCGCCCCCAGCAACCCCCGGGGCTTGG‑GAAAAAAATACCCGCTGCGCGGGGGCCACGGGTTTTACCTTACGGCTAACCGGTCg                                                                           >  2:1398213/1‑140 (MQ=9)
                                                               tgCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGGCCCATCGCCGCCGCCCCCAGGACCCCCCGGCTCTGGC‑GACCAAAAACGCCGCGGCGCGGAGCCCACGGCATATCCCATACGGCTACCCCGTCg                                                                           >  2:6794017/1‑140 (MQ=14)
                                                                 cATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCggg                                                                         <  2:5100223/140‑1 (MQ=255)
                                                                 cATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCggg                                                                         <  2:3194294/140‑1 (MQ=255)
                                                                  aTTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGgc                                                                        <  1:5231144/140‑1 (MQ=255)
                                                                   ttGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGgcg                                                                       <  2:4471332/140‑1 (MQ=255)
                                                                   ttGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGgcg                                                                       <  1:4572797/140‑1 (MQ=255)
                                                                   ttGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGgcg                                                                       <  1:3769317/140‑1 (MQ=255)
                                                                   ttGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGgcg                                                                       <  1:7209172/140‑1 (MQ=255)
                                                                    tGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCGGGGTGGGGCCAAACGCCGCCGCCCCCAGCACCCCCGTGCTATGGC‑GCACAAAATCGCAGGTGCGCGGGGGCCTCGGCTGTTACCATTCGGCTTCCGGGGCGGgggc                                                                      >  2:7879106/1‑140 (MQ=9)
                                                                    tGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGGCCAAAAGCCGCCGCCCCCAGCACCCCCCGGCTCTGGC‑GAACAAAATCGCCCCTGCGCGGTGCCCACCGCTTAAACCATAACGCTACCCCGTCCGgcgc                                                                      >  2:7048060/1‑140 (MQ=14)
                                                                     gCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGcgcg                                                                     <  2:6446674/140‑1 (MQ=255)
                                                                      cTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGa                                                                    <  2:3748933/140‑1 (MQ=255)
                                                                      cTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGGCCAATAGCCGCCGCCCCCAGCACCCCCCGGCTCTTGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCCGCTTATACCATACGGCAAACCGGTCGGGCGCGa                                                                    >  2:5906163/1‑140 (MQ=14)
                                                                        tCATATAATCACTGGCGCAAGGCGCGC‑GCAGGGGGCGGCCAATCGCCGCCGCCCCCAGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAgg                                                                  >  2:8296009/1‑140 (MQ=255)
                                                                           tataATCACTGGCGCAAGGAGCGC‑GCTGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTaa                                                               <  2:158071/140‑1 (MQ=37)
                                                                            ataATCACTGGCGCAAGGAGCGC‑GCCGGGGGCGGCCAAAACCCGCCGCCCCCAGCACCCCCCGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCACGGCTTATACCATACGGCTACCCGGTCGGGCGCGAGGTAAc                                                              >  2:8927042/1‑140 (MQ=11)
                                                                               aTCACTGGCGCAAGGAGCGC‑GCCGGGGGCGGCCAAACGCCGCCGCCCCCAGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGGGCCCTCGGCTTTTCCCTTACGGCGACCGGGGCGGGCGCGCGGGAAccgc                                                           >  2:1800463/1‑137 (MQ=11)
                                                                                tCACTGGCGCATGGAGCGC‑GCTGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATcc                                                          <  1:4909784/140‑1 (MQ=18)
                                                                                   cTGGCGCAAGGAGCGC‑GCAGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTg                                                       <  1:6054732/140‑1 (MQ=32)
                                                                                    tGGCGCAAGGAGCGC‑GCAGGGGGGGGCCAAAAGCCCCCCCCCCCCGCACCCCCCGGCTCTGGC‑GAACAAAAAACCCCCAGCCCGGGTCCCACCGCTTAACCCATAACGCTACCCTGTCGGGCGCGAGCTAACATcccact                                                      >  2:743997/1‑137 (MQ=2)
                                                                                    tGGCGCAAGGAGCGC‑GCAGGGGGCGGCCAATCGCCGCCGCCCCCATCACCCCCCGGCTCTGGC‑GAACAAAAACGCCGCTGCGCGGTGCCCACCGCTTATCCCATACGGCTACCCGGTCGGGCGCGAGGTAACaaaccagt                                                      >  2:790445/1‑133 (MQ=11)
                                                                                     ggCGCAAGGAGCGC‑GCAGGGGGCGGCCAAAAGCCGCCCCCCCCAGCACCCCCCGGCGCTGGC‑GAACAAAATAGCCGCAGCGCGGTGCCCACGGCGTATACCTTACGGCAAACCGGTCGGGCGCGCGGTAACAACCCAGTa                                                     >  2:915250/1‑140 (MQ=11)
                                                                                      gcgcAAGGAGCGC‑GCAGGGGGCGGCCAAAAGCCGCCGCCCCCAGCACCCCCCGGCTCTGGC‑GCACAAAATACCCGCCGCGCGGTGCCCACGGCTTATCCCGTAACGCTACCCGGTCGGGCGCGAGGTAACAAACCAGTaa                                                    >  2:8656759/1‑140 (MQ=11)
                                                                                         cAAGGAGCGC‑GCAGGGGGCGGCCAAAAGCCGCCCCCCCCAGCACCCCCCGGCTCAGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCACGGCTTATCCCGTACGGCTACCCGGTCGGGCGCGAGGGAACAAACCTGTAAAAc                                                 >  2:8268104/1‑140 (MQ=11)
                                                                                                cgc‑gcAGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCt                                          <  1:7989460/140‑1 (MQ=32)
                                                                                                cgc‑gcAGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCt                                          <  1:10013362/140‑1 (MQ=32)
                                                                                                  c‑gcAGGGGGCGGCCAATCGCCGCCCCCCCCAGCACCCCCCGGCTCTGGC‑GAACAAAATCGCCGCGGCGCGGTGCCCACGGCGTATACCGTACGGCTACCGGGTCGGGCGCGAGGTAACAACCCAGTAAAACGCGCCcaca                                        >  2:1938926/1‑140 (MQ=11)
                                                                                                     ctgggggCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGc                                      <  1:5075946/138‑1 (MQ=17)
                                                                                                      aGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGcc                                     <  1:840395/140‑1 (MQ=32)
                                                                                                      aGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGcc                                     <  2:792825/140‑1 (MQ=32)
                                                                                                      aGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGcc                                     <  2:8046649/140‑1 (MQ=32)
                                                                                                        ggggCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCca                                   <  1:8927042/140‑1 (MQ=32)
                                                                                                          ggcggcCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAACCGCGCCCTCAGCCcaca                                 <  2:8441151/140‑1 (MQ=17)
                                                                                                          ggcggcCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCcaca                                 <  1:4022917/140‑1 (MQ=32)
                                                                                                          ggcggcCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCcaca                                 <  2:3043631/140‑1 (MQ=32)
                                                                                                          ggcggcCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCcaca                                 <  1:4536818/140‑1 (MQ=32)
                                                                                                          ggcggcCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCcaca                                 <  2:10478946/140‑1 (MQ=32)
                                                                                                          ggcggcCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCcaca                                 <  2:10890754/140‑1 (MQ=32)
                                                                                                          ggcggcCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCcaca                                 <  2:10870095/140‑1 (MQ=32)
                                                                                                          ggcggcCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGATTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCcaca                                 <  2:8346049/140‑1 (MQ=17)
                                                                                                          ggcggcCAATCGCCGCCGCCCCCTGCACCCCCGGGCCCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCcaca                                 <  1:1660871/140‑1 (MQ=17)
                                                                                                              gcCAATCGGCGCCGCCCCCTGCACCCCCGGGCTCTTGC‑GAACAAAATCGCCGCTGCGCGGGGCCCTCGGCGAATACCATAAGGCAACCTGTTACGGCGCGAGGTTACAACCCTGTAAAACGCGCCCTCAACCCACCTCCa                             >  1:6838528/1‑140 (MQ=11)
                                                                                                              gcCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACAGCCa                             >  2:10777606/1‑140 (MQ=17)
                                                                                                              gcCAATCGCCGCCGCCCCCTGAACCCCCGGGCTCTGGC‑GACGAAACTCGCCGCGGCGCGGTGCCCTCGGCTTATCGCGTACGGCGACCGGGTCGGGCGGGTGGTAACATGCCTGGAAATCGCGCCCTCCGCCcactgcca                             >  2:3530874/1‑135 (MQ=11)
                                                                                                               ccAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACAtggat                            <  1:10274709/140‑5 (MQ=17)
                                                                                                                cAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCAtg                           <  1:7888457/140‑1 (MQ=32)
                                                                                                                  aTCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTaa                                                               <  1:10117419/102‑1 (MQ=32)
                                                                                                                  aTCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAATCGCGCCCTCAGCCCACGTCCAtgtg                         >  2:9277028/1‑140 (MQ=17)
                                                                                                                  aTCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCAtgtg                         >  1:8044593/1‑140 (MQ=32)
                                                                                                                  aTCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCAtgtg                         >  2:7683949/1‑140 (MQ=32)
                                                                                                                    cgccgccgcCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTggg                       <  1:7487005/140‑1 (MQ=32)
                                                                                                                    cgccgccgcCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTggg                       >  1:1084374/1‑140 (MQ=32)
                                                                                                                    cgccgccgcCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTggg                       <  2:5639236/140‑1 (MQ=32)
                                                                                                                         ccgccCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGcc                  >  1:5956591/1‑140 (MQ=32)
                                                                                                                             ccccTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCgg              <  2:5534223/140‑1 (MQ=32)
                                                                                                                              cccTGCACCCCCGGGCTCTGGC‑GAACAACATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGc             <  2:9691077/140‑1 (MQ=17)
                                                                                                                                 tGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCCGCCCACATCCATGTGGGCTGCCCCGGCCtt          >  2:4927355/1‑140 (MQ=17)
                                                                                                                                 tGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCtt          >  2:5860698/1‑140 (MQ=32)
                                                                                                                                 tGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCtt          <  2:668255/140‑1 (MQ=32)
                                                                                                                                 tGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCtt          >  2:682367/1‑140 (MQ=32)
                                                                                                                                 tGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGATGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCtt          >  2:8023205/1‑140 (MQ=17)
                                                                                                                                      ccccGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAggg     >  1:2404334/1‑140 (MQ=32)
                                                                                                                                       cccGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGa    >  2:6854150/1‑140 (MQ=32)
                                                                                                                                         cGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAAc  >  1:3415522/1‑140 (MQ=32)
                                                                                                                                          |                                                                                                                                           
TGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGC‑GAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAAC  >  NZ_CP025268/2233111‑2233386

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑