| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 93,044 | C→G | D16E (GAC→GAG) | murE → | UDP‑N‑acetylmuramoyl‑L‑alanyl‑D‑glutamate‑‑2, 6‑diaminopimelate ligase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 93,044 | 0 | C | G | 99.7% | 2302.6 / NA | 661 | D16E (GAC→GAG) | murE | UDP‑N‑acetylmuramoyl‑L‑alanyl‑D‑glutamate‑‑2, 6‑diaminopimelate ligase |
| Reads supporting (aligned to +/- strand): ref base C (1/1); major base G (240/417); minor base T (0/2); total (241/420) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.36e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 661 total aligned reads displayed.
CGGCGTATTGCGTACCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGACGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGCAGGCGATAGCGCAAGGTGTGGCT > NZ_CP025268/92908‑93179 | cggcgTATTGCGTACCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCa > 2:9863348/1‑140 (MQ=255) gcgTATTGCGTACCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCAcc < 1:549680/140‑1 (MQ=255) gcgTATTGCGTACCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCAcc < 2:1121350/140‑1 (MQ=255) cgTATTGCGTACCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGTGGCACCt > 1:7729881/1‑140 (MQ=255) cgTATTGCGTACCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCt > 1:4061514/1‑140 (MQ=255) cgTATTGCGTACCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCt > 1:307171/1‑140 (MQ=255) cgTATTGCGTACCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCt > 1:2935904/1‑140 (MQ=255) cgTATTGCGTACCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCt > 1:9988303/1‑140 (MQ=255) cgTATTGCGTACCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCt > 2:9511314/1‑140 (MQ=255) tGCGTACCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTcgcg < 2:8476878/140‑1 (MQ=255) tGCGTACCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTcgcg < 1:4540818/140‑1 (MQ=255) gCGTACCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCTGAGGCACCTTCGCGa > 2:6826072/1‑140 (MQ=255) cGTACCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAg < 2:10366784/140‑1 (MQ=255) cGTACCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAg < 1:907982/140‑1 (MQ=255) cGTACCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAAGTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAg < 2:710879/140‑1 (MQ=255) tACCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGACTTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCa > 1:10914004/1‑140 (MQ=255) aCCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTGGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCAc < 2:2917407/140‑1 (MQ=255) cATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTg < 2:6491367/140‑1 (MQ=255) cATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTg > 1:7373804/1‑140 (MQ=255) cATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTg > 1:6889887/1‑140 (MQ=255) tGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTATTCATGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCCGAGGCACCTTCGCGAGGCCTGCg > 1:10187866/1‑140 (MQ=255) tGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCg > 1:2596655/1‑140 (MQ=255) gAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGAATAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCga < 2:4773024/140‑1 (MQ=255) aCATCGAGCCGGATGCGCTTACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGTCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTACGTGGGTGACAGAGGCACCTTCTCGAGCACTCCgaga > 2:9304223/1‑140 (MQ=255) aTCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCgagaga < 1:2359276/140‑1 (MQ=255) cGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATg > 1:2811687/1‑140 (MQ=255) cGAGCCGGATGCGCTGACAACGGGCGAAAAAAAAGAATTAGTGATTAATCAAGGCGAGAGGACAGGTGTCAGATCGTAAATAGCGATAACTTCTTGCAACGTGTGTGCAAGAGGCACATTCGCTAGCACATCGAGAGATg > 2:7482120/1‑140 (MQ=255) gAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGa < 1:1503783/140‑1 (MQ=255) gAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGa > 2:1012634/1‑140 (MQ=255) gAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGa > 1:4670919/1‑140 (MQ=255) gAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGa < 1:10421436/140‑1 (MQ=255) gAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGa > 1:7194787/1‑140 (MQ=255) gAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGa < 1:1399085/140‑1 (MQ=255) gCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGaca > 2:5173412/1‑140 (MQ=255) cGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCACGGCGAGGGGCCAGGTGGCAGATCGTAATTTGCGCGACCTTCGTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACt < 2:6356186/140‑1 (MQ=255) cGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACt > 1:3254649/1‑140 (MQ=255) cGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATGAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACt < 2:7335450/140‑1 (MQ=255) gATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCg > 1:1777939/1‑140 (MQ=255) aTGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGa > 1:7943563/1‑140 (MQ=255) gcTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGc < 1:3824876/140‑1 (MQ=255) cTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGcc > 2:3371576/1‑140 (MQ=255) gACAACGGGCGATATAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCgt < 1:4740378/140‑1 (MQ=255) cGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGc < 1:4289842/140‑1 (MQ=255) aaaaTGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCggcggg < 2:3568643/140‑1 (MQ=255) aaaaTGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCggcggg < 2:4195051/140‑1 (MQ=255) aaTGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCggcgggcg > 1:4819031/1‑140 (MQ=255) tGAATTTGTGATTAATCACGGCGAGGGGACAGGTGGCAGATCGTACTTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGCCACTCGACAGCCGTGTGGCTGCGGCGGGCGAt < 2:3829759/140‑1 (MQ=255) tGAAGTGGTGATTACTCCAGGCGAGGGGACAGGTGGCAGATCGTAAGTTGCGCGACCGTCTTGCACCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGAt < 2:5913877/140‑1 (MQ=255) tgtgATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCttt < 2:4599185/140‑1 (MQ=255) tgATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGt < 1:756731/140‑1 (MQ=255) cttAATCTAGGCGAGGGGACAGGTGGCAGATAGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAg < 2:7885692/139‑1 (MQ=255) aTTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAg < 2:5012779/140‑1 (MQ=255) aTTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAg < 2:769769/140‑1 (MQ=255) aTTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAg < 1:10732904/140‑1 (MQ=255) aTTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAg < 1:10550061/140‑1 (MQ=255) ttAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGc < 2:8649187/140‑1 (MQ=255) aaTCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTg < 2:5777569/140‑1 (MQ=255) aTCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTgt < 2:10765436/140‑1 (MQ=255) aaGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTgtagt < 2:4494248/140‑1 (MQ=255) aaGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTgtagt < 2:1431312/140‑1 (MQ=255) aaGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTgtagt < 2:8103780/140‑1 (MQ=255) ggggACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGtcat < 1:943767/140‑1 (MQ=255) gggACAGGTGGCAGATCTTATTTTGCTCGACCTTCTTGCTACGAGGGTGCCAGAGGCACCTTAGCGAGCAGTTCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGtcatc > 2:4305371/1‑140 (MQ=255) gggACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGtcctc > 2:9057843/1‑140 (MQ=255) gggACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGtcatc < 1:1672144/140‑1 (MQ=255) gTGGCAGATCGTAATTTGCGCGACCTTCGTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGa < 2:1257499/140‑1 (MQ=255) tGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGAc < 2:273891/140‑1 (MQ=255) ggCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACg < 2:1735597/140‑1 (MQ=255) gCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACgg > 2:6213228/1‑140 (MQ=255) cAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACggg < 1:6773100/140‑1 (MQ=255) cAGATCGTAATTTGCGCGACCTTCGTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACggg < 2:7014091/140‑1 (MQ=255) cAGAGCGTAATTGGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACGGCGAGAGATGACACTCGACAGCCGTGGGGCTGCGGCGGGCGAGCGCGGTGTAGCGGGCGTCGGTCCGCCGGCGGCCggg > 2:10526292/1‑140 (MQ=255) aGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGc > 1:3490799/1‑140 (MQ=255) aGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGc < 1:5943064/140‑1 (MQ=255) gATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCg < 1:882130/140‑1 (MQ=255) gATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCg < 2:9678657/140‑1 (MQ=255) gATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCg < 1:6038128/140‑1 (MQ=255) gATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCg < 1:6587654/140‑1 (MQ=255) gATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCg < 2:2263687/140‑1 (MQ=255) gATCGTAATTTGCGCGACCGTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCg < 2:2427188/140‑1 (MQ=255) aaTTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGata < 1:8225330/140‑1 (MQ=255) tGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATc < 1:4379878/140‑1 (MQ=255) gcgACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCg < 2:3058130/140‑1 (MQ=255) cgACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGc < 1:9634822/140‑1 (MQ=255) ttcttGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGCAGGCg < 1:9332026/140‑1 (MQ=255) tcttGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGCAGGCGa < 2:8851707/140‑1 (MQ=255) tcttGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGCAGGCGa < 1:6274412/140‑1 (MQ=255) tcttGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGCAGGCGa > 1:9835973/1‑140 (MQ=255) cTCCGTTGGTGCCTGATGCACCTTAGAGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGTCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGCACGGGCGTCGCTATATCCCGCAGGCGATAgag < 2:55682/140‑3 (MQ=255) cTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGCCAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGCAGGCGATAgcg < 2:528572/140‑1 (MQ=255) ccGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGCAGGCGa > 2:197447/1‑133 (MQ=255) ccGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGCAGGCGa < 1:197447/133‑1 (MQ=255) ccGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGCAGGCGATAGCGCa < 2:6665610/140‑1 (MQ=255) ccGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGCAGGCGATAGCGCa < 1:5782644/140‑1 (MQ=255) gTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGCAGGCGATAGCGCAAg < 1:5261586/140‑1 (MQ=255) tGGGTGCCAGAGGCACATTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGCAGGCGATAGCGCAAgg > 1:5164413/1‑140 (MQ=255) tGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGCAGGCGATAGCGCAAGGtgtg < 1:8419062/140‑1 (MQ=255) tGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGCAGGCGATAGCGCAAGGtgtg < 1:6430971/140‑1 (MQ=255) ccAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGCAGGCGATAGCGCAAGGTGTGGc < 1:10044217/140‑1 (MQ=255) cAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGCAGGCGATAGCGCAAGGTGTGGCt < 1:1182970/140‑1 (MQ=255) | CGGCGTATTGCGTACCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGACGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGCAGGCGATAGCGCAAGGTGTGGCT > NZ_CP025268/92908‑93179 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |