Predicted mutation
evidence seq id position mutation annotation gene description
RA NZ_CP025268 1,161,210 A→G *270* (TAA→TAG pabC → aminodeoxychorismate lyase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0252681,161,2100AG98.9% 2122.1 / NA 623*270* (TAA→TAGpabCaminodeoxychorismate lyase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base G (333/282);  minor base T (4/3);  total (338/285)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 623 total aligned reads displayed.

GAGTCGTTGCAGGCAGATGAGATGGTTATTTGTAATGCGTTAATGCCAGTGATGCCCGTATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAATCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGTCTGGAAGGTTCGCCATCTTGCCGACAGCAAATTGCTTATCAAAGAAGAGACGATATTTACCCTG  >  NZ_CP025268/1161073‑1161344
                                                                                                                                         |                                                                                                                                      
 agTCGGTGCAGGCAGATGAGATGGTTATTTGTAATGCGTTAATGCCAGTGATGCCCGTATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCa                                                                                                                                     <  2:4986749/140‑1 (MQ=255)
   tCGTTGCAGGCAGTTGAGATGGTTATTTGTAAAGCGTTAATTCCAGTGATGCCCGTTTGTGCCAGTGGCGATGTCTCCTTTTAGTCAGAAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATg                                                                                                                                   >  2:3114502/1‑140 (MQ=255)
   tCGTTGCAGGCAGATTAGATGGTTATTTGTAATGCGTTAATGCCAGTGATGCCCGTATGTGCCTGTTGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTATCCCCACTTTGTGAGCGCCCGAATTAGTCaag                                                                                                                                   >  1:3843123/1‑138 (MQ=255)
   tCGTTGCAGGCAGATGAGATGGTTATTTGTAATTCGTTAATGCCAGTGATGCCCGTATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACCTTATATGAATATTTAGCCGCACTTTGTTAGCGCCCGAATTAGTCATg                                                                                                                                   >  1:7838240/1‑140 (MQ=255)
   tCGTTGCAGGCAGATGAGATGGTTATTTGTAATGCGTTAATGCCAGTGATGCCCGTATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACATTGTGAGCGCCCGAATTAGTCATg                                                                                                                                   >  1:5122362/1‑140 (MQ=255)
   tCGTTGCAGGCAGATGAGATGGTTATTTGTAATGCGTTAATGCCAGTGATGACCGTATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATg                                                                                                                                   >  2:900545/1‑140 (MQ=255)
   tCGTTGCAGGCAGATGAGATGGGTATTTGTAAAGCGTTAATGCCAGTGATGCCCGTATGTGCCTGTGGCGATGTCTCCTTTTCGTAAGCAACGTTATATGAATTTTTAGACCCACTATGTGAGAGCCCGAAATATTCATg                                                                                                                                   >  2:3697815/1‑140 (MQ=255)
   tCGTGGCAGGCAGATGAGATGGTTATTTGTAATGCGTTAATGACAGTGATGCCCGTATGTGACTGTGGCGATGTCTACTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACATTGTTAGCGCCCGAATAAGTCaag                                                                                                                                   >  2:4053093/1‑138 (MQ=255)
     gTTGCAGGCAGCTGAGATGGTTATTTGTAATGCGGTAATGCCAGTGATGCCCGTATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCCACGTTATAAGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGaa                                                                                                                                 >  2:5963053/1‑140 (MQ=255)
     gTTGCAGGCAGATGAGATTGTTATTTGTAATGCGTTAATGCCAGTGATGCCCGTATGTGCCTGTTGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGaa                                                                                                                                 <  2:8720856/140‑1 (MQ=255)
            gcagATGAGATGGTTATTTGGAATGCGTTCATGCCAGTGCTGCCCGTATGGGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATCAAAAAAgtg                                                                                                                          <  2:9549568/140‑1 (MQ=255)
             cagATGAGATGGTTATTTGTAATGCGTTAATGCCAGTGATGCCCGTATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAgtgt                                                                                                                         <  1:8727103/140‑1 (MQ=255)
              agatgagatgGTTATTTGTAATGCGTTAATGCCAGTGATGCCCGTATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGtt                                                                                                                        <  1:1371282/140‑1 (MQ=255)
                      tgGTTATTTGTAATGCGTTAATGCCAGTGATGCCCGTATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATaa                                                                                                                >  2:2187498/1‑140 (MQ=255)
                       ggTTATTTGTAATGCGTTAATGCCAGTGATGCCCGTATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAAt                                                                                                               <  1:10329146/140‑1 (MQ=255)
                          tATTTGTAATGCGTTAATGCCAGTGATGCCCGTATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCtt                                                                                                            <  1:8250794/140‑1 (MQ=255)
                             ttGTAATGCGTTAATGCCAGTGATGCCCGTATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGtt                                                                                                         >  2:1551890/1‑140 (MQ=255)
                              tGTAATGCGTTAATGCCAGTGATGCCCGTATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTa                                                                                                        >  2:10169439/1‑140 (MQ=255)
                                tAATGCGTTAATGCCAGTGATGCCCGTATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTAtt                                                                                                      <  2:420503/140‑1 (MQ=255)
                                 aaTGCGTTAATGCCAGTGATGCCCGTATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTg                                                                                                     <  1:576585/140‑1 (MQ=255)
                                  aTGCGTTAATGCCAGTGATGCCCGTATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCTTGAAAAAAGTGTTATTGATAATCTTGTTATTGc                                                                                                    >  2:5194699/1‑140 (MQ=255)
                                  aTGCGTTAATGCCAGTGATGCCCGTATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGc                                                                                                    <  2:551819/140‑1 (MQ=255)
                                   tGCGTTAATGCCAGTGATGCCCGTATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCt                                                                                                   >  2:8394670/1‑140 (MQ=255)
                                   tGCGTTAATGCCAGTGATGCCCGTATGTGCCTGTCTCGATTTCTCCTTTTCGTCAGCAGCGTTATATGACAATGTAGAACAACTTTGTGACCGCCCGAAGTAGTCATGAAAACAGTGTTAGTGTTAATGTTGTTATTGCt                                                                                                   >  2:4607073/1‑140 (MQ=255)
                                    gCGTTAATGCCAGTGATGCCCGTATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCtg                                                                                                  <  1:1137676/140‑1 (MQ=255)
                                     cGTTAATGCCAGTGATGCCCGTATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCtgg                                                                                                 <  1:6414741/140‑1 (MQ=255)
                                     cGTTAATGCCAGTGATGCCCGTATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCtgg                                                                                                 <  1:5450740/140‑1 (MQ=255)
                                       ttAATGCCAGTGATGCCCGTATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCtggtg                                                                                               >  1:8105709/1‑140 (MQ=255)
                                       ttAATGCCAGTGATGCCCGTATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAGTGTTATTGATAATCTTGTTATTGCtggtgg                                                                                              >  2:10910394/1‑140 (MQ=255)
                                          aTGCCAGTGATGCCCGTATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTa                                                                                            <  1:4404431/140‑1 (MQ=255)
                                          aTGCCAGTGATGCCCGTATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTa                                                                                            <  2:2748366/140‑1 (MQ=255)
                                          aTGCCAGTGATGCCCGTATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTa                                                                                            <  2:1731951/140‑1 (MQ=255)
                                          aTGCCAGTGATGCCCGTATGTGCCTGTGGCGATGTCTCCATTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGCATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTa                                                                                            <  2:4861304/140‑1 (MQ=255)
                                          aTGCCAGTGAGGCCCGTATGTGCCGGTGGCGATGGATACTTTTCTTCAGCAACGTTATCTGCATATTTAGCCCCACTTTGAGAGCGCCCGAATTCGTCATGAAAAAAGGGTTATTGATAATCTTGTTATTGCTGGTGGTa                                                                                            <  2:6481112/140‑1 (MQ=255)
                                            gCCAGTGATGCCCGTATGTGCCTGTGGCGAGGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACt                                                                                          <  1:9581119/140‑1 (MQ=255)
                                               aGTGATGCCCGTATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTggg                                                                                       >  1:4596683/1‑140 (MQ=255)
                                                gTGATGCCCGTATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGa                                                                                                                   >  1:10456802/1‑111 (MQ=255)
                                                 tGATGCCCGTATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTgggga                                                                                     >  1:5591919/1‑138 (MQ=255)
                                                  gATGCCCGTCTGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTAt                                                                                    <  2:7245017/140‑1 (MQ=255)
                                                  gATGCCCGTATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTAt                                                                                    <  1:9217638/140‑1 (MQ=255)
                                                  gATGCCCGTATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTAt                                                                                    <  1:3145851/140‑1 (MQ=255)
                                                       ccttATGTGCCTGTCGAGATGTCTCCTTGTCGACAGCAAAGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTTTTATTGATAATCTTGTTATTGCTTGTGGTACTGGGTATcgccg                                                                               <  2:8245075/137‑1 (MQ=255)
                                                       ccGTATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATcgccg                                                                               <  1:7469939/140‑1 (MQ=255)
                                                        cGTATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATcgccgc                                                                              <  1:9010700/140‑1 (MQ=255)
                                                        cGTATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATcgccgc                                                                              <  2:8105709/140‑1 (MQ=255)
                                                          tATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTg                                                                            >  1:6655751/1‑140 (MQ=255)
                                                          tATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTAATTGCTAATCTGGTTATTGCTGGTGGTACTGGGTATAGCCGCTg                                                                            >  2:6843933/1‑140 (MQ=255)
                                                           aTGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTgg                                                                           >  2:6332725/1‑140 (MQ=255)
                                                             gtgCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGgtg                                                                         <  1:6451154/140‑1 (MQ=255)
                                                             gtgCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGgtg                                                                         >  2:2088478/1‑140 (MQ=255)
                                                               gCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGaaaaaa                                                                                                                             <  1:500051/86‑1 (MQ=255)
                                                               gCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGtgtg                                                                       <  1:2905059/140‑1 (MQ=255)
                                                               gCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGtgtg                                                                       <  1:2575749/140‑1 (MQ=255)
                                                               gCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGGTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTCTCGCCGCTGGtgtg                                                                       >  1:6867575/1‑140 (MQ=255)
                                                                ccTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCtgg                                                                                                 <  2:6970661/113‑1 (MQ=255)
                                                                 cTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTggg                                                                     <  2:7632859/140‑1 (MQ=255)
                                                                    tgGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAATGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTAt                                                                                    >  2:6115553/1‑122 (MQ=255)
                                                                    tgGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCtgg                                                                                                 <  1:7170646/109‑1 (MQ=255)
                                                                    tgGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCtgg                                                                                                 >  2:7170646/1‑109 (MQ=255)
                                                                    tgGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCtgg                                                                                                 <  2:860611/109‑1 (MQ=255)
                                                                    tgGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGTGCGt                                                                  >  2:9830967/1‑140 (MQ=255)
                                                                    tgGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGt                                                                  >  2:1920232/1‑140 (MQ=255)
                                                                    tgGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGt                                                                  >  1:3993370/1‑140 (MQ=255)
                                                                    tgGAGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTAt                                                                                    <  1:6115553/122‑1 (MQ=255)
                                                                      gCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGTCt                                                                >  2:6186300/1‑140 (MQ=255)
                                                                        gATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGTCggg                                                              >  1:1070034/1‑140 (MQ=255)
                                                                                cTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGTCTGGAAGGTTCg                                                      <  1:8455026/140‑1 (MQ=255)
                                                                                cTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGTCTGGAAGGTTCg                                                      <  2:4424933/140‑1 (MQ=255)
                                                                                   ttCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGTCTGGAAGGTTCGCCa                                                   >  2:1339089/1‑140 (MQ=255)
                                                                                            aaCGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGTCTGGAAGGTTCGCCATCTTGCCGa                                          <  1:5942966/140‑1 (MQ=255)
                                                                                                   tatGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGTCTGGAAGGTTCGCCATCTTGCCGACAGCaaa                                   >  1:10058230/1‑140 (MQ=255)
                                                                                                      gactatTGAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAACAAAGTGTTATTGATAATCTTGCTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGTCTGGAAGGTTCGCCATCTTGCCGACAGCAAATTg                                <  1:4142423/137‑1 (MQ=255)
                                                                                                        atatTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGaaaaaa                                                                                                                             <  2:10627334/45‑1 (MQ=255)
                                                                                                         tatTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGTCTGGAAGGTTCGCCATCTTGCCGACAGCAAATTGCtt                             >  1:991520/1‑140 (MQ=255)
                                                                                                         tatTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGTCTGGAAGGTTCGCCATCTTGCCGACAGCAAATTGCtt                             >  1:7678259/1‑140 (MQ=255)
                                                                                                          atTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGTCTGGAAGGTTCGCCATCTTGCCGACAGCAAATTGCTTa                            <  1:2781431/140‑1 (MQ=255)
                                                                                                          atTTAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGTCTGGAAGGTTCGCCATCTTGCCGACAGCAAATTGCTTa                            >  1:10187303/1‑140 (MQ=255)
                                                                                                           tttAGCACCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGTCTGGAAGGTTCGCCATCTTGCCGACAGCAAATTGCTTAt                           <  1:736318/140‑1 (MQ=255)
                                                                                                             tAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGTCTGGAAGGTTCGCCATCTTGCCGACAGCAAATTGCTTATCa                         >  1:3292262/1‑140 (MQ=255)
                                                                                                             tAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGTCTGGAAGGTTCGCCATCTTGCCGACAGCAAATTGCTTATCa                         >  1:3567436/1‑140 (MQ=255)
                                                                                                             tAGCCCCACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGTCTGGAAGGTTCGCCATCTTGCCGACAGCAAATTGCTTATCa                         >  1:4810031/1‑140 (MQ=255)
                                                                                                                   cACTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGTCTGGAAGGTTCGCCATCTTGCCGACAGCAAATTGCTTATCAaagaag                   <  1:8603721/140‑1 (MQ=255)
                                                                                                                     cTTTGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGTCTGGAAGGTTCGCCATCTTGCCGACAGCa                                     <  1:7031051/120‑1 (MQ=255)
                                                                                                                      tttGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGAGAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGTCTGGAAGGTTCGCCATCTTGCCGACAGCAAATTGCTTATCAAAGAAgaga                <  2:10531296/140‑1 (MQ=255)
                                                                                                                       ttGTTAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTTTTGCTGGTGTTACTGGGTATCGCCGCTGGTGTGGGCGTCTGGAAGGTTCGCCATCTTGCCGACAGCAAATTGCTTATCAAAGAAGAGAc               <  2:9186384/140‑1 (MQ=255)
                                                                                                                       ttGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGTCTGGAAGGTTCGCCATCTTGCCGACAGCAAATTGCTTATCAAAGAAGAGAc               <  2:9722980/140‑1 (MQ=255)
                                                                                                                       ttGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGTCTGGAAGGTTCGCCATCTTGCCGACAGCAAATTGCTTATCAAAGAAGAGAc               <  1:2265638/140‑1 (MQ=255)
                                                                                                                       ttGTGAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTAGTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGTCTGGAAGGTTCGCCATCTTGCCGACAGCAAATTGCTTATCAAAGAAGAGAc               <  2:8478275/140‑1 (MQ=255)
                                                                                                                        tgtgAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGTCTGGAAGGTTCGCCATCTTGCCGACAGCAAATTGCTTATCAAAGAAGAGACg              >  2:2499637/1‑140 (MQ=255)
                                                                                                                        tgtgAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGTCTGGAAGGTTCGCCATCTTGCCGACAGCAAATTGCTTATCAAAGAAGAGACg              >  2:3388143/1‑140 (MQ=255)
                                                                                                                        tgtgAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGTCTGGAAGGTTCGCCATCTTGCCGACAGCAAATTGCTTATCAAAGAAGAGACg              >  2:3514785/1‑140 (MQ=255)
                                                                                                                        tgtgAGCGCCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCGGGTGGTACTGGGTATCGCCGAGGGTGTGGGCGTCTGGCAGGTTCGCCATCGTGCCGACAGCAAATTGCTTATCAAAGAAGTGACg              >  2:9323564/1‑140 (MQ=255)
                                                                                                                             gcgcCCGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGTCTGGAAGGTTCGCCATCTTGCCGACAGCAAATTGCTTATCAAAGAAGAGACGATAtt         <  1:2037084/140‑1 (MQ=255)
                                                                                                                              cgcCCGAATTAGTCATGAAAAAAGTGTTATTGATACTCTTGTTAATGCTGGTGGTCCTGGGTATCGCCGCTGGTGTGGGCGTCTGGAAGGTTCGCCATCTTGCCGACAGCACATAGCTTATCAAAGACGAGACGATAttt        <  2:5771246/140‑1 (MQ=255)
                                                                                                                                cccGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTAt                                                                                    <  1:6260888/62‑1 (MQ=255)
                                                                                                                                cccGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGTCTGGAAGGTTCGCCATCTTGCCGACAGCAAATTGCTTATCAAAGAAGAGACGATATTTAc      >  2:7812761/1‑140 (MQ=255)
                                                                                                                                cccGAATTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGTCTGGAAGGTTCGCCATCTTGCCGACAGCAAATTGCTTATCAAAGAAGAGACGATATTTAc      >  2:7444046/1‑140 (MQ=255)
                                                                                                                                    aaTTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGTCTGGAAGGTTCGCCATCTTGCCGACAGCAAATTGCTTATCAAAGAAGAGACGATATTTACCCTg  <  1:3922190/140‑1 (MQ=255)
                                                                                                                                    aaTTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGTCTGGAAGGTTCGCCATCTTGCCGACAGCAAATTGCTTATCAAAGAAGAGACGATATTTACCCTg  <  1:1718216/140‑1 (MQ=255)
                                                                                                                                    aaTTAGTCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGTCTGGAAGGTTCGCCATCTTGCCGACAGCAAATTGCTTATCAAAGAAGAGACGATATTTACCCTg  <  1:5271399/140‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                      
GAGTCGTTGCAGGCAGATGAGATGGTTATTTGTAATGCGTTAATGCCAGTGATGCCCGTATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAATCATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGTCTGGAAGGTTCGCCATCTTGCCGACAGCAAATTGCTTATCAAAGAAGAGACGATATTTACCCTG  >  NZ_CP025268/1161073‑1161344

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: