BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	1,386,607	A→G	pseudogene (969/1082 nt)	CXP41_RS07340 →	ABC transporter ATP‑binding protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	1,386,607	0	A	G	100.0%	2029.2 / NA	578	pseudogene (969/1082 nt)	CXP41_RS07340	ABC transporter ATP‑binding protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (272/306); total (272/306)

Only 100 of 578 total aligned reads displayed.

CCCATCGTGATGGGAATACGACCGGAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAATGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAGGGGGAAGGCATTCCCC  >  NZ_CP025268/1386470‑1386742

cccATCGTGATGGGACAACGACCGGAAGATCTTCATCCGGACGCGCCAGACGAAACTCACATTACCGCCAAAAGTAGCGTGGCATACTTACCCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTg                                                                                                                                       <  2:4387618/140‑1 (MQ=255)

cccATCGTGATGGGAATACGACCGGAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTg                                                                                                                                       >  2:10302645/1‑140 (MQ=255)

  cATCGTGATGGGAATACGACCGGAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGt                                                                                                                                     <  1:8348744/140‑1 (MQ=255)

  cATCGTGATGGGAATACGACCGGAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGt                                                                                                                                     <  1:2451784/140‑1 (MQ=255)

    tCGTGATGGGAATACGACCGGAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTcc                                                                                                                                   >  1:1027026/1‑140 (MQ=255)

    tCGTGATGGGAATACGACCGGAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTcc                                                                                                                                   <  2:10081270/140‑1 (MQ=255)

     cttGAAGGTAATACTACCCGAAGATATTCATACCGACGCGCAAGATGAAAATAACATTTCCGCCAAAATTAGAGTGGCAGAATTAACCGCTGCGGAATTTATGATCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCg                                                                                                                                  >  2:361011/3‑140 (MQ=255)

     cGTGATGGGAATACGACCGGAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCg                                                                                                                                  >  2:215584/1‑140 (MQ=255)

         aTGGGAATACGACCGGAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGTATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCt                                                                                                                              >  1:2033282/1‑140 (MQ=255)

          tGGGAATACGACCGGAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTg                                                                                                                             <  1:7806568/140‑1 (MQ=255)

          tGGGAATACGACCGGAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGGTGGGGGCACGAGTTAGTGGTCCGTGCTg                                                                                                                             >  2:2624649/1‑140 (MQ=255)

              aaTACGACCGGAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGc                                                                                                                         >  2:9580237/1‑140 (MQ=255)

               aTACGACCGGGAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTg                                                                                                                          >  1:7433300/1‑138 (MQ=255)

               aTACGACCGGAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCg                                                                                                                        >  2:3730602/1‑140 (MQ=255)

               aTACGACCGGAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCg                                                                                                                        >  1:3586387/1‑140 (MQ=255)

               aTACGACCGGAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCg                                                                                                                        <  1:5331442/140‑1 (MQ=255)

                 aCGACCGGAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGtt                                                                                                                      >  1:2291916/1‑140 (MQ=255)

                  cGACCGGAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTa                                                                                                                     <  1:8792132/140‑1 (MQ=255)

                    aCCGGAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTaaa                                                                                                                   <  1:1376403/140‑1 (MQ=255)

                     ccGGAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAAt                                                                                                                  <  2:1363180/140‑1 (MQ=255)

                      cGGAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATg                                                                                                                 >  1:9704601/1‑140 (MQ=255)

                        gAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGAt                                                                                                               >  1:4513822/1‑140 (MQ=255)

                        gAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGAt                                                                                                               >  1:10388959/1‑140 (MQ=255)

                        gAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGAt                                                                                                               <  1:9071923/140‑1 (MQ=255)

                        gAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGAt                                                                                                               >  2:4941859/1‑140 (MQ=255)

                        gAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGAt                                                                                                               >  1:2586167/1‑140 (MQ=255)

                          aGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTa                                                                                                             <  1:10092144/140‑1 (MQ=255)

                               ttCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATg                                                                                                        <  2:9489240/140‑1 (MQ=255)

                               ttCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATg                                                                                                        <  2:6077707/140‑1 (MQ=255)

                               ttCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATg                                                                                                        >  2:9779697/1‑140 (MQ=255)

                               ttCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATGAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATg                                                                                                        <  2:856385/140‑1 (MQ=255)

                                tCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGc                                                                                                       >  1:4701715/1‑140 (MQ=255)

                                   tCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAgg                                                                                                    >  1:6778576/1‑140 (MQ=255)

                                   tCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAgg                                                                                                    >  2:8832015/1‑140 (MQ=255)

                                    ccGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGga                                                                                                   <  2:7979400/140‑1 (MQ=255)

                                    ccGGACGCGCAAGAGGAAAAGAACATTTCCGCCCAAAGTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGga                                                                                                   <  2:8398574/140‑1 (MQ=255)

                                       gACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGaa                                                                                                >  1:2835767/1‑140 (MQ=255)

                                       gACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGaa                                                                                                >  2:717572/1‑140 (MQ=255)

                                       gACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGaa                                                                                                >  1:5791174/1‑140 (MQ=255)

                                              aaGAGGAAAATAACAGTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCa                                                                                         <  1:3056991/140‑1 (MQ=255)

                                                  ggAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTAt                                                                                     <  1:1004045/140‑1 (MQ=255)

                                                   gAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTAtt                                                                                    <  1:4232717/140‑1 (MQ=255)

                                                      aaTAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCAt                                                                                 >  1:7885976/1‑140 (MQ=255)

                                                        tAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCAttt                                                                               >  1:5587690/1‑140 (MQ=255)

                                                           cATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGa                                                                            >  2:3007153/1‑140 (MQ=255)

                                                            aTTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGat                                                                           <  2:10913676/140‑1 (MQ=255)

                                                             attCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGata                                                                          <  2:6886890/139‑1 (MQ=255)

                                                              ttCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGatat                                                                         >  1:7597783/1‑140 (MQ=255)

                                                              ttCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGatat                                                                         >  1:6849054/1‑140 (MQ=255)

                                                              ttCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGatat                                                                         >  1:9276380/1‑140 (MQ=255)

                                                                ccGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGa                                                                       <  1:1130936/140‑1 (MQ=255)

                                                                   ccAACAGTAGCGTGGCAGACTTCACCGGTGCGGAATTGATGCTCTACACCACGGTTGGGGGCACGAGGTAGGGGTCCGTGCTGGTGCGTTAAATGATGCTCATGCAGGAGAAAATATCACTCTTCATTTTGATATGACGa                                                                    <  2:9256414/140‑1 (MQ=255)

                                                                   ccAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGa                                                                    >  2:2266919/1‑140 (MQ=255)

                                                                                ggCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCtt                                                       >  1:5480846/1‑140 (MQ=255)

                                                                                 gCAGAATTAACCGGTGCGGAATTTATGCTCTACAACACGGTTGGGGGCACGGGTGAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAACTATCACTATTCATTTTGATATGAGGACATGTCATGTCttt                                                      >  2:8941984/1‑140 (MQ=255)

                                                                                       ttAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCa                                                <  2:7528210/140‑1 (MQ=255)

                                                                                         aaCCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTGTGATGCAGa                                              >  1:7047581/1‑140 (MQ=255)

                                                                                          aCCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGaa                                             >  2:3324232/1‑140 (MQ=255)

                                                                                                      atcttGCTCTACACCACGGTTGGGGGCACGCGTTAGTGGGCCGTGCTGGTGCGTTAAATGAGTATCATGCAGGAGAAAATCTCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAACTAGCa                                 <  2:5491053/136‑1 (MQ=255)

                                                                                                        tATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAAt                               <  1:9938504/140‑1 (MQ=255)

                                                                                                        tATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAAt                               <  2:6381578/140‑1 (MQ=255)

                                                                                                        tATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAAt                               <  2:58375/140‑1 (MQ=255)

                                                                                                        tATGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATGATCATGCAGGAGAAAATATCCCTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAAt                               <  2:2402627/140‑1 (MQ=255)

                                                                                                         aTGCTCTACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAAtt                              >  1:5179677/1‑140 (MQ=255)

                                                                                                              ctACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCTTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTa                         <  1:8085785/140‑1 (MQ=255)

                                                                                                              ctACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTa                         <  2:503289/140‑1 (MQ=255)

                                                                                                              ctACACCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTa                         <  1:3832725/140‑1 (MQ=255)

                                                                                                              ctACACCACGGTGGGGGGCACGAGTTAGGGGTCCGTGCTGGTGCGTTAAATGAGTATCATGCAGGAGAAACTATCACTATTCATTTTGATATGACGAACTGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTa                         <  1:8960908/140‑1 (MQ=255)

                                                                                                              ctACACCACGGGTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTa                         >  1:2903594/1‑140 (MQ=255)

                                                                                                                acacCACGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTaaa                       >  1:6642400/1‑140 (MQ=255)

                                                                                                                     ccGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATCTCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCTATTCGCTAAATACAg                  <  2:3889918/139‑1 (MQ=255)

                                                                                                                     acGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAg                  >  1:4056968/1‑140 (MQ=255)

                                                                                                                      cGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGaaaa                                                                                              <  1:1705500/63‑1 (MQ=255)

                                                                                                                      cGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGaaaa                                                                                              >  2:1705500/1‑63 (MQ=255)

                                                                                                                      cGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAgg                 >  2:10731489/1‑140 (MQ=255)

                                                                                                                      cGGTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAgg                 >  2:1957410/1‑140 (MQ=255)

                                                                                                                       ggTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAggg                <  1:9460259/140‑1 (MQ=255)

                                                                                                                       ggTTGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTGTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAggg                >  2:2865300/1‑140 (MQ=255)

                                                                                                                         ttGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTCTCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAggggg              >  2:5728126/1‑140 (MQ=255)

                                                                                                                         ttGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAggggg              >  1:3423632/1‑140 (MQ=255)

                                                                                                                         ttGGGGGCACGAGGTAGTGGTCCGTGGTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGTCGAAATGTCATTTCTTTGATGCAGTAACGGAAATAGCAATGCGCTAAATACAggggg              >  2:1487853/1‑140 (MQ=255)

                                                                                                                           gggggCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAGGGGGaa            <  2:6731939/140‑1 (MQ=255)

                                                                                                                           gggggCACGAGTTAGTGGTCCGTGCTGGTGCGTAAAAAGATTAGCATGCAGGAGCAAATATCACTATTCATTGTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAGGGGGaa            <  1:8469474/140‑1 (MQ=255)

                                                                                                                              ggCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAGGGGGAAGGc         >  1:4998015/1‑140 (MQ=255)

                                                                                                                                cACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAGGGGGAAGGCAt       <  1:10768468/140‑1 (MQ=255)

                                                                                                                                cACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAGGGGGAAGGCAt       <  1:6347704/140‑1 (MQ=255)

                                                                                                                                cACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAGGGGGAAGGCAt       >  2:7632857/1‑140 (MQ=255)

                                                                                                                                cACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAGGGGGAAGGCAt       <  2:470452/140‑1 (MQ=255)

                                                                                                                                cACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAGGGGGAAGGCAt       <  1:2655582/140‑1 (MQ=255)

                                                                                                                                cACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAGGGGGAAGGCAt       <  1:9809389/140‑1 (MQ=255)

                                                                                                                                cACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAGGGGGAAGGCAt       <  1:5989402/140‑1 (MQ=255)

                                                                                                                                 aCGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTCAATACAGGGGGAAGGCAtt      >  1:7205040/1‑140 (MQ=255)

                                                                                                                                  cGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAGGGGGAAGGCATTc     >  1:9577185/1‑140 (MQ=255)

                                                                                                                                   gAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGTCGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAGGGGGAAGGCATTcc    >  2:10439659/1‑140 (MQ=255)

                                                                                                                                   gAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAGGGGGAAGGCATTcc    >  1:857457/1‑140 (MQ=255)

                                                                                                                                   gAGGTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAGGGGGAAGGCATTcc    >  2:41809/1‑140 (MQ=255)

                                                                                                                                     gTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAGGGGGAAGGCATTcccc  <  2:7367938/140‑1 (MQ=255)

                                                                                                                                     gTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAGGGGGAAGGCATTcccc  <  1:4814504/140‑1 (MQ=255)

                                                                                                                                     gTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAGGGGGAAGGCATTcccc  <  1:6105539/140‑1 (MQ=255)

                                                                                                                                     gTTAGTGGTCCGTGCTGGTGCGTTAAATCATTAACATGCAGGAGTAAATATCACTAGTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCGAAATACAGGGGGAAGGCATTcccc  <  2:820586/140‑1 (MQ=255)

CCCATCGTGATGGGAATACGACCGGAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGCACGAGTTAATGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAGGGGGAAGGCATTCCCC  >  NZ_CP025268/1386470‑1386742

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`