BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	1,762,540	T→C	pseudogene (1000/1000 nt)	ldtE ←	L,D‑transpeptidase LdtE

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	1,762,540	0	T	C	100.0%	1785.0 / NA	512	pseudogene (1000/1000 nt)	ldtE	L,D‑transpeptidase LdtE
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (292/220); total (292/220)

Only 100 of 512 total aligned reads displayed.

TTCAGGCTGCTAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGTTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCTTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAA  >  NZ_CP025268/1762403‑1762666

ttCAGGCTGCTAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTa                                                                                                                                   >  2:311532/1‑140 (MQ=255)

ttCAGGCTGCTAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCAATTTTTTTGTCTGCCGTTTACCGCTa                                                                                                                                   <  2:8876427/140‑1 (MQ=255)

  cAGGCTGCTAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACAGTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACt                                                                                                                                 >  2:6854802/1‑140 (MQ=255)

      ctgctAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGt                                                                                                                             <  2:5442054/140‑1 (MQ=255)

       tgctAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGTCTAATAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCTTTTTTTTTGTCTGCCGTTTACCGCTACTGCGTc                                                                                                                            <  2:333828/140‑1 (MQ=255)

       tgctAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTc                                                                                                                            <  1:7309650/140‑1 (MQ=255)

       tgctAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTc                                                                                                                            <  2:1383404/140‑1 (MQ=255)

       tgctAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTc                                                                                                                            <  1:2303504/140‑1 (MQ=255)

         ctAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCAc                                                                                                                          >  2:190686/1‑140 (MQ=255)

            aaGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCAcgcg                                                                                                                       <  1:3968294/140‑1 (MQ=255)

             aGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGt                                                                                                                      <  1:4270504/140‑1 (MQ=255)

                 gACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACa                                                                                                                  <  2:5792244/140‑1 (MQ=255)

                 gACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACa                                                                                                                  >  1:3018039/1‑140 (MQ=255)

                   cGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTACTAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGAGTCACGCGTAACata                                                                                                                >  2:7880223/1‑140 (MQ=255)

                   cGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTAc                                                                                                                                  >  2:4868795/1‑122 (MQ=255)

                   cGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTCACata                                                                                                                >  1:10292538/1‑140 (MQ=255)

                   cGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACata                                                                                                                <  2:1991617/140‑1 (MQ=255)

                   cGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACata                                                                                                                <  1:3194469/140‑1 (MQ=255)

                   cGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACata                                                                                                                <  1:1690529/140‑1 (MQ=255)

                   cGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACata                                                                                                                >  2:7719365/1‑140 (MQ=255)

                   cGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACata                                                                                                                >  1:4357094/1‑140 (MQ=255)

                   cGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACata                                                                                                                >  1:8296291/1‑140 (MQ=255)

                        cTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTcc‑‑‑‑c                                                                                                       >  1:4656451/1‑140 (MQ=255)

                         tCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑Ct                                                                                                      >  1:6227114/1‑140 (MQ=255)

                            tGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGc                                                                                                  >  2:6480821/1‑140 (MQ=255)

                                aaCCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctg                                                                                              >  1:9899310‑M1/1‑136 (MQ=255)

                                aaCCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctg                                                                                              <  1:9546916‑M1/140‑5 (MQ=255)

                                 aCCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctgg                                                                                             >  2:7611666‑M1/1‑135 (MQ=255)

                                      cGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcac                                                                                        >  2:1699084‑M1/1‑130 (MQ=255)

                                      cGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcac                                                                                        >  2:4067192‑M1/1‑130 (MQ=255)

                                         cTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccat                                                                                     <  1:10107613‑M1/140‑14 (MQ=255)

                                          tGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGNCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggntcaccatt                                                                                    <  1:5915662‑M1/140‑15 (MQ=255)

                                            gACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattct                                                                                  >  1:7983570‑M1/1‑124 (MQ=255)

                                                acaTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgc                                                                              <  1:2724432‑M1/140‑21 (MQ=255)

                                                acaTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgc                                                                              <  2:1513621‑M1/140‑21 (MQ=255)

                                                acaTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgc                                                                              >  2:10809279‑M1/1‑120 (MQ=255)

                                                acaTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgc                                                                              <  1:9420017‑M1/140‑21 (MQ=255)

                                                acaTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgc                                                                              >  1:563472‑M1/1‑120 (MQ=255)

                                                  aTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctg                                                                            >  1:10757699‑M1/1‑118 (MQ=255)

                                                    ggCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAATTGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgac                                                                          <  2:10291126‑M1/140‑25 (MQ=255)

                                                    ggCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgac                                                                          <  1:6884039‑M1/140‑25 (MQ=255)

                                                    ggCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATAGTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgac                                                                          <  2:1239202‑M1/140‑25 (MQ=255)

                                                    ggCTACTAAATACCGCAAGGCATAGTACCTGTGAAGTGAAAAATGGCGCACATTGGGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgac                                                                          >  2:3531874‑M1/1‑116 (MQ=255)

                                                      ctactaAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactc                                                                        >  1:3452883‑M1/1‑114 (MQ=255)

                                                         ctaAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctac                                                                     >  1:5003970‑M1/1‑111 (MQ=255)

                                                              tACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGACGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaag                                                                >  2:3924244‑M1/1‑106 (MQ=255)

                                                               aCCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATATTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaagg                                                               >  2:9329029‑M1/1‑105 (MQ=255)

                                                                ccGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggc                                                              >  1:9151467‑M1/1‑104 (MQ=255)

                                                                 cGCCAGTAATAGTTCCTGTGTAGTGAAAATTGGCGCACCTTGTGCGCCATTTTTGTTGTCTGCCGTTTACGGCTACTGCGTGTGGCGTGAGATATGCCGGTGCTGTGGTTCACCAGTCTGCGCTGACTCTACTGAAGgcg                                                                  >  2:6908600/1‑140 (MQ=255)

                                                                   cAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑Ct                                                                                                      <  2:6338048/98‑1 (MQ=255)

                                                                   cAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgca                                                           >  1:5520054‑M1/1‑101 (MQ=255)

                                                                   cAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgca                                                           >  2:741915‑M1/1‑101 (MQ=255)

                                                                        aagagtaCCTGTGAAGTGAAAACTGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgct                                                      <  1:7119548‑M1/137‑45 (MQ=255)

                                                                         aTAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctg                                                     >  1:647638‑M1/1‑95 (MQ=255)

                                                                          tAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactga                                                                  >  1:1226105‑M1/1‑94 (MQ=255)

                                                                             tACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATAGTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctg                                                 <  2:8490463‑M1/140‑50 (MQ=255)

                                                                             tACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATAGTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctg                                                 <  2:5316180‑M1/140‑50 (MQ=255)

                                                                              aCCTGTGAAGTGAAAAATTGCGCACAATGTGCGCCATTTTTTTTGTCTGCCTTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtcttgttaaccaatctgcgctgactctactgaaggcgcattgctggatgc                                                >  1:2877110‑M1/1‑90 (MQ=255)

                                                                               ccggtgaagtgaaaaaTGGCGCACATTGTGCGCCATTTTTTTTGTCTTCCGTTTACCGCTACTGAGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcg                                               >  2:2309064‑M1/4‑89 (MQ=255)

                                                                                cTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgg                                              >  1:9055439‑M1/1‑88 (MQ=255)

                                                                                cTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgg                                              >  1:5726410‑M1/1‑88 (MQ=255)

                                                                                cTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgg                                              >  1:7375705‑M1/1‑88 (MQ=255)

                                                                                 tgtgAAGTGAAACATGGCGCACATTGTGCGCCAATTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATAGTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggg                                             <  2:2506845‑M1/140‑54 (MQ=255)

                                                                                 tgtgAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggg                                             >  1:7639028‑M1/1‑87 (MQ=255)

                                                                                 tgtgAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggg                                             <  2:746623‑M1/140‑54 (MQ=255)

                                                                                 tgtgAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggg                                             <  2:8403278‑M1/140‑54 (MQ=255)

                                                                                 tgtgAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggg                                             >  2:9437215‑M1/1‑87 (MQ=255)

                                                                                 tgtgAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggg                                             >  2:4187749‑M1/1‑87 (MQ=255)

                                                                                 tgtgAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTATACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggg                                             <  1:8187702‑M1/140‑54 (MQ=255)

                                                                                  gtgaagtgaaAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CA‑TGCtctggttcaccattctgcgctgactcaactgaaggcgcattgctggctgcggga                                            >  1:784733‑M1/1‑86 (MQ=255)

                                                                                    gaagtgaaAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagt                                          <  1:2441210‑M1/140‑57 (MQ=255)

                                                                                     aagtgaaAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagtt                                         >  2:9102494‑M1/1‑83 (MQ=255)

                                                                                       gtgaaAAATGGCGCTCATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgacgctactgaaggcgcattgctggctgcgggaggtgc                                       >  1:357344‑M1/1‑81 (MQ=255)

                                                                                       gtgaaAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctagtgaaggcgcattgctggctgcgggagttgc                                       >  2:9676257‑M1/1‑81 (MQ=255)

                                                                                       gtgaaAAATGGCGCACAGTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgc                                       >  2:8188817‑M1/1‑81 (MQ=255)

                                                                                           aaaaTGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctcca                                   <  1:3140401‑M1/140‑64 (MQ=255)

                                                                                           aaaaTGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgaattgctggctgcgggagttgctcca                                   <  1:846749‑M1/140‑64 (MQ=255)

                                                                                                  cgcACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctca                            >  1:6710670‑M1/1‑70 (MQ=255)

                                                                                                   gcACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcac                           <  2:10565335‑M1/140‑72 (MQ=255)

                                                                                                    cacaTTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcacc                          >  1:7035516‑M1/1‑68 (MQ=255)

                                                                                                     acaTTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccg                         <  2:5614038‑M1/140‑74 (MQ=255)

                                                                                                     acaTTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccg                         <  1:10492373‑M1/140‑74 (MQ=255)

                                                                                                     acaTTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATAGTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccg                         <  1:749648‑M1/140‑74 (MQ=255)

                                                                                                       aTTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaa                       <  1:8783470‑M1/140‑76 (MQ=255)

                                                                                                       aTTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaa                       <  1:5309295‑M1/140‑76 (MQ=255)

                                                                                                       aTTGTGCGACATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTATCATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcacagaa                       <  2:9227236‑M1/140‑76 (MQ=255)

                                                                                                         tgtgCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaac                     >  2:451123‑M1/1‑63 (MQ=255)

                                                                                                          gtgCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaacc                    >  1:4087795‑M1/1‑62 (MQ=255)

                                                                                                            gcgcCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccgg                  <  2:2911492‑M1/140‑81 (MQ=255)

                                                                                                            gcgcCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccgg                  >  2:810439‑M1/1‑60 (MQ=255)

                                                                                                             cgcCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccgga                 >  1:1429943‑M1/1‑59 (MQ=255)

                                                                                                                 aTTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggatacc             >  2:504727‑M1/1‑55 (MQ=255)

                                                                                                                 aTTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggatacc             >  2:4385569‑M1/1‑55 (MQ=255)

                                                                                                                 aTTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggatacc             >  1:890207‑M1/1‑55 (MQ=255)

                                                                                                                    ttttttGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctg          <  1:2119968‑M1/140‑89 (MQ=255)

                                                                                                                      ttttGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctgggtcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcc        <  1:10900107‑M1/140‑91 (MQ=255)

                                                                                                                         tGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACCTATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccacggctcaccgaaaccggataccctgcccga     <  2:9698566‑M1/140‑94 (MQ=255)

                                                                                                                            cTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgataccggatacgctggccgacga  >  1:8641788‑M1/1‑44 (MQ=255)

                                                                                                                            cTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacga  >  2:732670‑M1/1‑44 (MQ=255)

                                                                                                                            cTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacga  >  2:1105356‑M1/1‑44 (MQ=255)

TTCAGGCTGCTAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGTTACTGCGTCACGCGTAACATATTCC‑‑‑‑CT‑TGCTTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAA  >  NZ_CP025268/1762403‑1762666

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`