| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,167,134 | A→G | N74D (AAT→GAT) | baeS → | two‑component system sensor histidine kinase BaeS |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,167,134 | 0 | A | G | 99.9% | 3313.3 / NA | 953 | N74D (AAT→GAT) | baeS | two‑component system sensor histidine kinase BaeS |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (607/345); minor base T (1/0); total (608/345) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 1018 total aligned reads displayed.
ACTGGGCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACAATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTTCTGGGTGGTTGATCAAAACAACAAAGTGCTGGTTG > NZ_CP025268/2166997‑2167269 | aCTGGGCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGAt > 1:142691/1‑140 (MQ=255)aCTGGGCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGAt > 1:2357243/1‑140 (MQ=255) tGGGCGGTGCGTCTCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGa > 2:4841675/1‑140 (MQ=255) tGGGCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGa > 1:72962/1‑140 (MQ=255) tGGGCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGa > 2:2372132/1‑140 (MQ=255) gggCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACgatgat > 1:10635123/1‑140 (MQ=255) gggCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACgatgat > 1:947514/1‑140 (MQ=255) gggCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACgatgat > 2:5607527/1‑140 (MQ=255) gggCGGTGCGTATCAGTTTTGAGCGTGGCGTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCGTGGCGAGCAGTATGCGCAGCATGGCACCTGGCGCTTCCTGCGCAACgatgat > 2:6695765/1‑140 (MQ=255) ggCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATc > 1:5362338/1‑140 (MQ=255) ggCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATc > 1:3995089/1‑140 (MQ=255) ggCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATc > 2:2861398/1‑140 (MQ=255) gCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCg > 2:2735921/1‑140 (MQ=255) gCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCg > 2:1880775/1‑140 (MQ=255) gCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCg > 2:5499441/1‑140 (MQ=255) gCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCg > 2:9523718/1‑140 (MQ=255) gCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCg > 1:4208889/1‑140 (MQ=255) gCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCg > 1:6247212/1‑140 (MQ=255) gCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCg > 1:8177967/1‑140 (MQ=255) gCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCg > 1:10218118/1‑140 (MQ=255) tGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACACCTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCACCGAGGATCGCttt > 2:8016924/1‑140 (MQ=255) tGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCttt > 1:2492845/1‑140 (MQ=255) tGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCttt < 2:3647121/140‑1 (MQ=255) tGCGTATCAGTATTTAGCGATGCTTTATTGATTACATCAAGCATGGAAAAGAACAGCGATTACAACAGTTAAGTGATGCGCTTGGCGAGCACTATGCGCAGCATGGAAACTGGCGCTTCCTGCGCAACGATGATCCCttg > 2:5738648/1‑139 (MQ=255) cGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGt < 2:7669999/140‑1 (MQ=255) cAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCAAGGTAATGAACAGCGATTACAACAGTTAAGAGATTCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGACCTCTTTGTCTTTc < 2:9219190/140‑1 (MQ=255) ttGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATc < 1:544689/140‑1 (MQ=255) aGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTg > 1:9280914/1‑140 (MQ=255) aGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTGTGTCTTTCAGATCCTg > 2:9823087/1‑140 (MQ=255) cGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCg < 1:7119819/140‑1 (MQ=255) ggCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTc > 1:8724532/1‑140 (MQ=255) ggCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTc > 1:7456486/1‑140 (MQ=255) gATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAaca > 2:8834298/1‑140 (MQ=255) aTTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAacac > 1:3072515/1‑140 (MQ=255) tACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGa < 2:5267151/140‑1 (MQ=255) aCATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGAt > 1:2662955/1‑140 (MQ=255) cATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATa > 2:7540307/1‑140 (MQ=255) cAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAAtt > 1:2869134/1‑140 (MQ=255) aGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCg < 2:10124816/140‑1 (MQ=255) aGCATGGTAAAGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGATCATTTGAACACGATAATTCg < 1:5231112/140‑1 (MQ=255) gCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGCTCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCgg < 1:7916195/140‑1 (MQ=255) gCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCgg < 2:1555800/140‑1 (MQ=255) ggTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGa > 2:4229519/1‑140 (MQ=255) ggTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCACTATGCGCAGAATGGCAACTGGCGCTACATGAGCAACGATGATCTCTTTGTCTTTCAGATCATGCGTTCATTTGAACAACATAATTCGGAAGa > 2:7352599/1‑140 (MQ=255) gTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGAt > 1:10433699/1‑140 (MQ=255) gTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGAt > 2:903919/1‑140 (MQ=255) gTAATGAACAGCGATTACAACTGTAAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTTAACACGATAATTCGGAAGAt > 1:8898348/1‑140 (MQ=255) gAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAAcc < 2:1283814/140‑1 (MQ=255) aGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAAcccggc < 2:1115479/140‑1 (MQ=255) aGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAAcccggc > 2:10212455/1‑140 (MQ=255) aGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAAcccggc < 2:2538221/140‑1 (MQ=255) aGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAAcccggc > 2:7857089/1‑140 (MQ=255) aGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAAcccggc > 2:5891360/1‑140 (MQ=255) aGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAAcccggc > 2:3997553/1‑140 (MQ=255) cGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATACTTCGGAAGATAAAcccggccc > 1:3560696/1‑140 (MQ=255) cGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATACTTCGGAAGATAAAcccggccc > 1:8389403/1‑140 (MQ=255) cGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGCAGATAAAcccggccc > 2:8419759/1‑140 (MQ=255) cGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAAcccggccc > 1:9720080/1‑140 (MQ=255) cGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAAcccggccc > 2:613498/1‑140 (MQ=255) cGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAAcccggccc < 1:3310963/140‑1 (MQ=255) cGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAAcccggccc < 2:8233232/140‑1 (MQ=255) cGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAAcccggccc < 2:3487943/140‑1 (MQ=255) cGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTGCATGTGAACACGATAATTCGGAAGATAAAcccggccc > 2:8538798/1‑140 (MQ=255) cGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGAAGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAAcccggccc > 1:10789105/1‑140 (MQ=255) ttAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCACCGATGATCGCTTTGTCTTGCAGATCCTGCGTTCATTTGAACACGATACTTCGGAAGATAAACCCGGCCCGGGTATGCCAcc > 2:1655799/1‑140 (MQ=255) ttAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGNAAGATAATCCCGGCCCGGGTATGCCAcc > 1:5870933/1‑140 (MQ=255) ttAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCAcc > 2:10498563/1‑140 (MQ=255) ttAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCAcc > 1:1206264/1‑140 (MQ=255) tAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCg < 1:9897274/140‑1 (MQ=255) tAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCg > 1:2269567/1‑140 (MQ=255) tGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACg > 1:4912722/1‑140 (MQ=255) gATGCGCTTGGCGAGCAGTATGCGCANCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACgg < 1:6673386/140‑1 (MQ=255) tGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACgg < 1:1888006/138‑1 (MQ=255) tGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCt > 1:5119671/1‑140 (MQ=255) cgcTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTgg > 1:10022928/1‑140 (MQ=255) cgcTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTgg > 1:2802439/1‑140 (MQ=255) cgcTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTgg > 2:2126689/1‑140 (MQ=255) gcTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGc < 2:9349539/140‑1 (MQ=255) gCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTAcc < 1:202558/140‑1 (MQ=255) gCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTAcc < 1:6024353/140‑1 (MQ=255) gCGAGCAGGATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTAcc < 1:6901782/140‑1 (MQ=255) gTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGc < 1:5052096/128‑1 (MQ=255) gTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGc > 2:5052096/1‑128 (MQ=255) tATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTTCTg < 1:6477825/140‑1 (MQ=255) tGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTTCTggg > 1:904298/1‑140 (MQ=255) gcagcaTGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTTCTGggtgg < 2:10635123/140‑1 (MQ=255) agcaTGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTTCTGGGTGGtt > 1:158286/1‑140 (MQ=255) agcaTGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCAGTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTTCTGGGTGGtt > 2:867119/1‑140 (MQ=255) gcaTGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATACTTCGGAAGATAAACCCGGCCCGGGTCTGCCACCGCACGGCTGGCGTACCCAGTTCTGGGTGGTTg > 2:3274450/1‑140 (MQ=255) gcaTGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTTCTGggtgggtg > 1:5695537/1‑140 (MQ=255) caTGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTTCTGGGTGGTTGa > 2:3876038/1‑140 (MQ=255) aTGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTTCTGGGTGGTTGAt > 1:4439456/1‑140 (MQ=255) aTGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTTCTGGGTGGTTGAt < 1:1734958/140‑1 (MQ=255) aTGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTTCTGGGTGGTTGAt > 2:4568550/1‑140 (MQ=255) ggCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTTCTGGGTGGTTGATCa < 2:6431515/140‑1 (MQ=255) gCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACACAGTTCTGGGTGGTTGATCaa < 1:4601129/140‑1 (MQ=255) aaCTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTTCTGGGTGGTTGATCaaaa < 2:6881697/140‑1 (MQ=255) aCTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTTCTGGGTGGTTGATCAAaac < 2:719719/140‑1 (MQ=255) gcgcTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTTCTGGGTGGTTGATCAAAacaaca < 1:3746456/140‑1 (MQ=255) gcgcTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATACTGAGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTTCTGGGTGGTTGATCAAAacaaca < 1:7633927/140‑1 (MQ=255) | ACTGGGCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACAATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTTCTGGGTGGTTGATCAAAACAACAAAGTGCTGGTTG > NZ_CP025268/2166997‑2167269 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |