BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	2,741,519	A→G	114 (TAA→TAG)	raiA →	ribosome‑associated translation inhibitor RaiA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	2,741,519	0	A	G	100.0%	1472.5 / NA	422	114 (TAA→TAG)	raiA	ribosome‑associated translation inhibitor RaiA
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (211/211); total (211/211)

Only 100 of 424 total aligned reads displayed.

ATATGTACACCGCAATTAACGAATTGATCAACAAGCTGGAACGGCAGCTCAATAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAATCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAACAGTACGGGTACTGTACTAAAGTCACTTAAGGAAACAAACATGAAACACATACCGTTTTTCTTCGCATTCTTT  >  NZ_CP025268/2741383‑2741655

atatGTACACCGCAATTAACGAATTGATCAACAAGCTGGAACGGCAGCTCAATAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTcc                                                                                                                                       <  2:787740/140‑1 (MQ=255)

 tatGTACCCCGCAATTCACGAATTGATCAACACGCTGGAACGGCAGCTCACTCAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCt                                                                                                                                      <  1:9211759/140‑1 (MQ=255)

 tatGTACACCGCAATTAACGAATTGATCAACAAGCTGGAACGGCAGCTCAATAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCt                                                                                                                                      <  1:5150226/140‑1 (MQ=255)

  atGTACCCCGCAATTAACGAAGTGATCACCAAGCTGGAACGGCAGCTCAATAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCtt                                                                                                                                     <  1:6509139/140‑1 (MQ=255)

  atGTACACCGCAATTAACGAATTGATCAACAAGCTGGAACGGCAGCTCAATAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCtt                                                                                                                                     <  1:5491443/140‑1 (MQ=255)

   tGTACACCGCAATTAACGAATTGATCAACAAGCTGGAACGGCAGCTCAATAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCttt                                                                                                                                    <  2:6641026/140‑1 (MQ=255)

   tGTACACCGCAATTAACGAATTGATCAACAAGCTGGAACGGCAGCTCAATAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCttt                                                                                                                                    >  1:7960098/1‑140 (MQ=255)

   tGTACACCGCAATTAACGAATTGATCAACAAGCTGGAACGGCAGCTCAATAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCttt                                                                                                                                    >  2:3714370/1‑140 (MQ=255)

   tGTACACCGCAATTAACGAATTGATCAACAAGCTGGAACGGCAGCTCAATAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGGTGAAGAAGAGTAGTCCttt                                                                                                                                    >  2:4218094/1‑140 (MQ=255)

    gTACACCGCAATTAACGAATTGATCAACAAGCTGGAACGGCAGCTCAATAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTta                                                                                                                                   >  1:10710375/1‑140 (MQ=255)

      acacCGCAATTAACGAATTGATCAACAAGCTGGAACGGCAGCTCAATAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTtata                                                                                                                                 <  2:5558977/140‑1 (MQ=255)

      acacCGCAATTAACCAATTCAACAACAAGCTGGAACGGCAGCTCAATAAACTTCAGCACAAATGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTACGACGAAGAATTTGAAGAAGAGTAGTCCTTtata                                                                                                                                 <  2:9601425/140‑1 (MQ=255)

         ccGCAATTAACGAATTGATCAACAAGCTGGAACGGCAGCTCAATAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTg                                                                                                                              <  2:4996065/140‑1 (MQ=255)

         ccGCAATTAACGAATTGATCAACAAGCTGGAACGGCAGCTCAATAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTg                                                                                                                              <  1:1037135/140‑1 (MQ=255)

         ccGCAATTAACGAATTGATCAACAAGCTGGAACGGCAGCTCAATAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTg                                                                                                                              >  1:8932773/1‑140 (MQ=255)

          cGCAATTAACGAATTGATCAACAAGCTGGAACGGCAGCTCAATAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGa                                                                                                                             >  1:5343488/1‑140 (MQ=255)

          cGCAATTAACGAATTGATCAACAAGCTGGAACGGCAGCTCAATAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGa                                                                                                                             >  2:4816670/1‑140 (MQ=255)

          cGCAATTAACGAATTGATCAACAAGCTGGAACGGCAGCTCAATAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGa                                                                                                                             >  1:2200318/1‑140 (MQ=255)

            cAATTAACGAATTGATCAACAAGCTGGAACGGCAGCTCAATAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAgt                                                                                                                           >  1:3169217/1‑140 (MQ=255)

             aaTTAACGAATTGATCAACAAGCTGGAACGGCAGCTCAATAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAgtg                                                                                                                          >  2:6569597/1‑140 (MQ=255)

              aTTAACGAATTGATCAACAAGCTGGAACGGCAGCTCAATAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGACGTTGAAGAAGAGTAGTCCTTTATATTGAgtgt                                                                                                                         >  1:3520525/1‑140 (MQ=255)

               ttAACGAATTGATCAACAAGCTGGAACGGCAGCTCAATAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTa                                                                                                                        >  1:5801494/1‑140 (MQ=255)

               ttAACGAATTGATCAACAAGCTGGAACGGCAGCTCAATAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTa                                                                                                                        >  1:6230647/1‑140 (MQ=255)

                      aTTGATCAACAAGCTGGAACGGCAGCTCAATAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAATGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCaa                                                                                                                 >  2:6262854/1‑140 (MQ=255)

                      aTTGATCAACAAGCTGGAACGGCAGCTCAATAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCaa                                                                                                                 >  2:8911937/1‑140 (MQ=255)

                         gATCAACAAGCTGGAACGGCAGCTCAATAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAAcgc                                                                                                              >  2:8405876/1‑140 (MQ=255)

                                   cTGGAACGGCAGCTCAATAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGgc                                                                                                    <  1:823418/140‑1 (MQ=255)

                                    tGGAACGGCAGCTCAAAAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTTAATTGAGTGTATCGCCTACGCGGCTTCGGgcg                                                                                                   >  2:7417569/1‑140 (MQ=255)

                                      gAACGGCAGCTCAATAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGcgcg                                                                                                 >  1:3023888/1‑140 (MQ=255)

                                       accGGCAGCTCAAGTAACGGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCACCTTCGTCGAAGAAGATGAAGTAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCTCGt                                                                                                <  2:3055757/138‑1 (MQ=255)

                                              gCTCAATAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTttgt                                                                                         >  1:3386935/1‑140 (MQ=255)

                                              gCTCAATAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTttgt                                                                                         >  2:5675776/1‑140 (MQ=255)

                                              gCTCAATAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTGTTttgt                                                                                         >  1:10430340/1‑140 (MQ=255)

                                              gCTCAATAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGATGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTttgt                                                                                         >  1:10190462/1‑140 (MQ=255)

                                                  cacacaCTGCAGCACAAAGGCGACGCACGTCGTGCCGCAACATCGGGGCAAGCCGCCAACTACGACGAAGAAGTTGAAGAACCGTAGTCCATTATCTGGAGTGTATCGCCAACGCGCCATCGGGCGCGTTTATTGCTGAc                                                                                     <  2:4493691/135‑1 (MQ=255)

                                                  aaTAAACTGCAGCACACAGGCGAAGCACGTCGTGCCGCAACCTCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGAc                                                                                     <  1:1473913/140‑1 (MQ=255)

                                                  aaTAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCt                                                                                                                                      >  2:2159265/1‑91 (MQ=255)

                                                  aaTAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGAc                                                                                     <  2:7126052/140‑1 (MQ=255)

                                                  aaTAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGAc                                                                                     <  2:1394305/140‑1 (MQ=255)

                                                  aaTAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGAc                                                                                     <  1:10878188/140‑1 (MQ=255)

                                                      aaCTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCg                                                                                 >  2:4405354/1‑140 (MQ=255)

                                                       aCTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGt                                                                                <  1:1979935/140‑1 (MQ=255)

                                                       aCTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGt                                                                                <  1:7304594/140‑1 (MQ=255)

                                                       aCTGAATCACTAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTTTATTGAGTGTATCGCCAACGAGCCTTCGGGCGGGTTTTTTGTTGACAGCGt                                                                                <  2:1037542/140‑1 (MQ=255)

                                                         tGCAGCGCAAAGGCGTAGCGCGTCGTGCCGCTAGATCGGTGAATGTCGCCGACTTCGTCGTTGAAGTTGAAGAAGAGTTGTCCGTGCTAGTGAGTGTAGCGCCAACGCGCCTTCGGGCGCGTGTTGTGTTGTCAGCGGGa                                                                              >  2:863448/1‑140 (MQ=255)

                                                          gcagcaCAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGaa                                                                             >  2:800609/1‑140 (MQ=255)

                                                          gcagcaCAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGaa                                                                             <  1:3995212/140‑1 (MQ=255)

                                                          gcagcaCAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTATTTGTTGACAGCGTGaa                                                                             <  2:10867659/140‑1 (MQ=255)

                                                           cagcaCAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGACGAAGAAGGTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGACCTCGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGaaa                                                                            >  2:7509936/1‑140 (MQ=255)

                                                            agcaCAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGaaaa                                                                           >  1:8569128/1‑140 (MQ=255)

                                                            agcaCAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGaaaa                                                                           >  2:6387098/1‑140 (MQ=255)

                                                            agcaCAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTGTTTTGTTGACAGCGTGaaaa                                                                           >  2:2906886/1‑140 (MQ=255)

                                                            agcaCAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCGTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTGTTTTGTTGACAGCGTGaaaa                                                                           >  2:5885943/1‑140 (MQ=255)

                                                             gcaCAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAAc                                                                          <  2:5286103/140‑1 (MQ=255)

                                                             gcaCAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAAc                                                                          <  1:1684591/140‑1 (MQ=255)

                                                             gcaCAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAAc                                                                          <  2:10207317/140‑1 (MQ=255)

                                                             gcaCAAAGGCGAAGCACGTCGTGCCGCAACAACGGTGAAAGACGCCAACTTCGTCGAAGACGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAAc                                                                          <  1:9693774/140‑1 (MQ=255)

                                                              cacaAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAACa                                                                         >  2:10051275/1‑140 (MQ=255)

                                                              cacaAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTACGTCGAAGAAGTTGAAGAAGAGTAGTCCTTGAAATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTAGTTGACAGCGTGAAAACa                                                                         >  1:10507505/1‑140 (MQ=255)

                                                                  aaGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAACAGTAc                                                                     <  1:5947317/140‑1 (MQ=255)

                                                                  aaGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAACAGTAc                                                                     <  1:4206264/140‑1 (MQ=255)

                                                                  aaGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAACAGTAc                                                                     <  2:6783891/140‑1 (MQ=255)

                                                                   aGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCATCTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAACAGTACg                                                                    <  2:9331327/140‑1 (MQ=255)

                                                                   aGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTTAGTGTATCGCCAACGCGCCTACGGGCGCGTATTTTGTTGACAGCGTGAAAACAGTACg                                                                    >  1:129994/1‑140 (MQ=255)

                                                                     gCGTAGCACGTCGTGCGGCTACATCGGTGAAAGACGCCAACTTCGTCGACGAAGTTGAAGAAGAGTAGTCCGTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTGTTTTGTTGTCAGCGGGATAACAGTACggg                                                                  >  2:910615/1‑140 (MQ=255)

                                                                     gCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAACAGTACggg                                                                  <  1:4904451/140‑1 (MQ=255)

                                                                     gCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAACAGTACggg                                                                  <  2:5090125/140‑1 (MQ=255)

                                                                     gCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAACAGTACggg                                                                  <  2:3482888/140‑1 (MQ=255)

                                                                       gacgCACGTCGTGCCGCAACCTCGGTGAACGACGCCAACTTCGACGAATAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCATTCGGGCGCGTTTTTTGTTGACAGCGTGAAAACAGTACGGgta                                                                <  1:9457806/137‑1 (MQ=255)

                                                                       gAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCATCTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAACAGTACGGgta                                                                <  2:6008479/140‑1 (MQ=255)

                                                                       gAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAACAGTACGGgta                                                                <  1:9342005/140‑1 (MQ=255)

                                                                       gAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAACAGTACGGgta                                                                <  1:2369946/140‑1 (MQ=255)

                                                                       gAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAACAGTACGGgta                                                                <  1:2895341/140‑1 (MQ=255)

                                                                       gAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAACAGTACGGgta                                                                <  2:10784962/140‑1 (MQ=255)

                                                                       gAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAACAGTACGGgta                                                                <  2:10607426/140‑1 (MQ=255)

                                                                       gAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAACAGTACGGgta                                                                <  1:9051954/140‑1 (MQ=255)

                                                                       gAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAACAGTACGGgta                                                                <  1:8804387/140‑1 (MQ=255)

                                                                       gAAGCACGTCGTGCCGCAACAACGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAACAGTACGGgta                                                                <  1:7587636/140‑1 (MQ=255)

                                                                               tcgtGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAACAGTACGGGTACTGTACTa                                                        >  2:2685474/1‑140 (MQ=255)

                                                                               tcgtGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAACAGTACGGGTACTGTACTa                                                        >  2:9743982/1‑140 (MQ=255)

                                                                                 gtGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAACAGTACGGGTACTGTACTaaa                                                      <  1:7108887/140‑1 (MQ=255)

                                                                                   gCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAACAGTACGGGTACTGTACTAAAGt                                                    <  1:5638576/140‑1 (MQ=255)

                                                                                     cGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAACAGTACGGGTACTGTACTAAAGTCa                                                  >  1:387306/1‑140 (MQ=255)

                                                                                          cATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAACAGTACGGGTACTGTACTAAAGTCACTTaa                                             >  1:1153352/1‑140 (MQ=255)

                                                                                               gTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAACAGTACGGGTACTGTACTAAAGTCACTTAAGGaaa                                        >  1:738892/1‑140 (MQ=255)

                                                                                                tGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAACAGTACGGGTACTGTACTAAAGTCACTTAAGGaaac                                       <  1:2450170/140‑1 (MQ=255)

                                                                                                 gAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAACAGTACGGGTACTGTACTAAAGTCACTTAAGGaaaca                                      >  1:4290510/1‑140 (MQ=255)

                                                                                                    aGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAGTcc                                                                                                                                       <  2:184987/40‑1 (MQ=255)

                                                                                                       cGCCAACTTCGACGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAACAGTACGGGTACTGTACTAAAGTCACTTAAGGAAACAAACATg                                <  2:6888238/140‑1 (MQ=255)

                                                                                                        gCCAACTTCGGCGTTGTAGTTGCAGTAGTGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTGCGGGCGCGTTTTTGGTTGTCGGCGTGTAAACTGTTGGGGGAGTGTTCTAGAGGCACGGTAGGAAGCAATCATGa                               >  2:3965650/1‑140 (MQ=255)

                                                                                                              ttCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAACAGTACGGGTACTGTACTAAAGTCACTTAAGGAAACAAACATGAAAcaca                         <  1:4540821/140‑1 (MQ=255)

                                                                                                              ttCGTCGAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAACAGTACGGGTACTGTACTAAAGTCACTTAAGGAAACAAACATGAAAcaca                         <  1:1767765/140‑1 (MQ=255)

                                                                                                                  tcgAAGAAGTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAACAGTACGGGTACTGTACTAAAGTCACTTAAGGAAACAAACATGAAACACATAcc                     >  2:9462582/1‑140 (MQ=255)

                                                                                                                       gaagTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAACAGTACGGGTACTGTACTAAAGTCACTTAAGGAAACAAACATGAAACACATACCGtttt                <  1:8373564/140‑1 (MQ=255)

                                                                                                                          gTTGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAACAGTACGGGTACTGTACTAAAGTCACTTAAGGAAACAAACATGa                               <  1:641160/122‑1 (MQ=255)

                                                                                                                           ttGAAGAAGAGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAACAGTACGGGTACTGTACTAAAGTCACTTAAGGAAACAAACATGAAACACATACCGTTTttctt            <  1:1005183/140‑1 (MQ=255)

                                                                                                                               agacgaGGAGTCCTGTATAGTGAGTGTAGCGCCAACGCGCCGTCGGGCGCGGTTTGTGTTGACAGCGTGAAAACAGTACGGGTACTGTACTAAAGGCACTTCAGGAAACAAACATGAAACACATACCGTTTTTCTTCGCa        <  2:8237021/140‑1 (MQ=255)

                                                                                                                               agaagaGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAACAGTACGGGTACTGTACTAAAGTCACTTAAGGAAACAAACATGAAACACATACCGTTTTTCTTCGCa        <  2:2381114/140‑1 (MQ=255)

                                                                                                                                gaagaGTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAACAGTACGGGTACTGTACTAAAGTCACTTAAGGAAACAAACATGAAACACATACCGTTTTTCTTCGCAt       <  1:4732255/140‑1 (MQ=255)

                                                                                                                                     gTAGTCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGt                                                                                                <  1:6672505/46‑1 (MQ=255)

ATATGTACACCGCAATTAACGAATTGATCAACAAGCTGGAACGGCAGCTCAATAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAATCCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGTGAAAACAGTACGGGTACTGTACTAAAGTCACTTAAGGAAACAAACATGAAACACATACCGTTTTTCTTCGCATTCTTT  >  NZ_CP025268/2741383‑2741655

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`