Predicted mutation
evidence seq id position mutation annotation gene description
RA NZ_CP025268 3,016,591 T→C *257* (TAA→TAG yqeC ← selenium cofactor biosynthesis protein YqeC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0252683,016,5910TC99.7% 1999.6 / NA 578*257* (TAA→TAGyqeCselenium cofactor biosynthesis protein YqeC
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (231/345);  minor base A (1/1);  total (232/346)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 578 total aligned reads displayed.

GGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCTTTCAGTAACCCGGAATACCCGGGCCGTTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACATTGAGAAAAACGGTTAA  >  NZ_CP025268/3016455‑3016727
                                                                                                                                         |                                                                                                                                        
gggAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGTAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTa                                                                                                                                        <  2:4981053/140‑1 (MQ=255)
gggAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTa                                                                                                                                        <  1:4343373/140‑1 (MQ=255)
gggAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTa                                                                                                                                        <  1:3121105/140‑1 (MQ=255)
   aGTCGAGCCTCGGCTCTCAACAAGTTGCGCCCTCGCAAACGGAGGATGTTGCTCTTCGAGTTTTGCCGCCTCTGTGAGAGTCTTCCTACCAACCTCAATGGCTATCCTTTCAGTCACCCGGAATACCCGGGCCGCTAAtt                                                                                                                                     >  2:2029665/1‑140 (MQ=255)
   aGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAAtt                                                                                                                                     >  1:10250234/1‑140 (MQ=255)
   aGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAAtt                                                                                                                                     >  2:7275631/1‑140 (MQ=255)
   aGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAAtt                                                                                                                                     <  2:7120221/140‑1 (MQ=255)
       gAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTcaca                                                                                                                                 >  2:8894440/1‑140 (MQ=255)
        aGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGGTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTCATTCACaa                                                                                                                                >  2:375820/1‑140 (MQ=255)
             cGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACACGGGCCGCGAATTCACAAATCTg                                                                                                                           >  1:8948599/1‑140 (MQ=255)
               gCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAACCTgcg                                                                                                                         >  1:4028574/1‑140 (MQ=255)
                 tATCAACAATTTGCTCCATAGCAAACGGACAATTTTGATCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTgcgcg                                                                                                                       <  2:9902088/140‑1 (MQ=255)
                 tATCAACAATTTGCGCCATAGCAAACTGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTgcgcg                                                                                                                       <  1:5860320/140‑1 (MQ=255)
                  aTCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAAGACCCGGGCCGCTAATTCACAAATCTgcgcgc                                                                                                                      <  1:9046765/140‑1 (MQ=255)
                       caaTTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTg                                                                                                                 <  1:6660674/140‑1 (MQ=255)
                         aTTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCa                                                                                                               <  1:2486011/140‑1 (MQ=255)
                           ttGCGCCATAGCTAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAgg                                                                                                             <  2:7505838/140‑1 (MQ=255)
                           ttGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAgg                                                                                                             <  1:9709922/140‑1 (MQ=255)
                           ttGCGCCAGAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAgg                                                                                                             <  1:3924191/140‑1 (MQ=255)
                            tGCGCCATAGCAGACTGACAATTTTGCTATTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGa                                                                                                            <  2:8365721/140‑1 (MQ=255)
                            tGCGCCATAGCAAACGGACACTTTTGCTCTTCGAGTTGTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGa                                                                                                            <  2:2437050/140‑1 (MQ=255)
                            tGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGa                                                                                                            <  1:2679559/140‑1 (MQ=255)
                            tGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGa                                                                                                            <  1:5477864/140‑1 (MQ=255)
                            tGCGACATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGa                                                                                                            <  2:2553199/140‑1 (MQ=255)
                             gcgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGAt                                                                                                           >  1:533934/1‑140 (MQ=255)
                              cgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg                                                                                                          <  1:4236962/140‑1 (MQ=255)
                              cgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg                                                                                                          <  1:7664465/140‑1 (MQ=255)
                              cgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg                                                                                                          <  2:4127689/140‑1 (MQ=255)
                              cgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg                                                                                                          <  1:3266638/140‑1 (MQ=255)
                              cgcCATAGCAAACGGACAATTTAGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg                                                                                                          <  1:9768251/140‑1 (MQ=255)
                                  aTAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCt                                                                                                      <  2:2965371/140‑1 (MQ=255)
                                    aGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTg                                                                                                    >  1:10011119/1‑140 (MQ=255)
                                         aCGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCGTGTatat                                                                                               >  1:4665914/1‑140 (MQ=255)
                                           ggACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCg                                                                                             >  2:2348572/1‑140 (MQ=255)
                                           ggACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGAAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCTCTCGATTGCAGGATGTTCTTGTATATCg                                                                                             >  1:9214092/1‑140 (MQ=255)
                                           ggACAATTTTGCTCTTCGAGTATTGCAGCCTCAGTGAAAATATTCATAACAACCACAAAGGATATACTTTCATTAACCCGGACTACCCGGGCCGCTAATACACAAATCTGCGCGCGATTGCCGGATGTTCTTGTATATCg                                                                                             >  1:5103040/1‑140 (MQ=255)
                                            gACAATTTTGCTCTTCGAGTTTTGCAGACTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACACGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGc                                                                                            <  2:1530925/140‑1 (MQ=255)
                                             aCAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGcc                                                                                           <  1:3608009/140‑1 (MQ=255)
                                                    tGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTGTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCccagccag                                                                                    <  1:10653599/140‑1 (MQ=255)
                                                      ctctTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGAt                                                                                  <  1:10798454/140‑1 (MQ=255)
                                                       tctTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGACTACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGAtt                                                                                 >  1:1493043/1‑140 (MQ=255)
                                                        ctTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTg                                                                                <  1:1154961/140‑1 (MQ=255)
                                                        ctTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTg                                                                                <  2:3921880/140‑1 (MQ=255)
                                                          tCGAGTTTTGCAGCCTCTGTGAAAATATTCATACAAACATCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTTTATCGCCCAGCCAGATTGcc                                                                              >  2:9152717/1‑140 (MQ=255)
                                                           cGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCct                                                                             <  2:3019626/140‑1 (MQ=255)
                                                           cGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCct                                                                             <  1:2348572/140‑1 (MQ=255)
                                                                     aGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCgtg                                                                   <  2:5832820/140‑1 (MQ=255)
                                                                      gCCTCTGTGAAAATATTCATACCAACCTCACTGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCgtgt                                                                  <  2:176513/140‑1 (MQ=255)
                                                                       ccTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTCACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGtgtt                                                                 <  1:8482044/140‑1 (MQ=255)
                                                                        ctctGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGtgttg                                                                >  2:4193553/1‑140 (MQ=255)
                                                                           tgtgAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGttgttg                                                             >  1:1215153/1‑140 (MQ=255)
                                                                            gtgAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGc                                                            >  2:5196859/1‑140 (MQ=255)
                                                                             tgAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCa                                                           <  2:3609757/140‑1 (MQ=255)
                                                                             tgAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCa                                                           <  1:8052597/140‑1 (MQ=255)
                                                                             tgAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCa                                                           <  1:5239403/140‑1 (MQ=255)
                                                                             tgAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCa                                                           <  1:10753424/140‑1 (MQ=255)
                                                                             tgAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCa                                                           <  2:10875688/140‑1 (MQ=255)
                                                                             tgAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCAGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCa                                                           <  2:5275023/140‑1 (MQ=255)
                                                                                 aaTATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCgg                                                       >  1:4592159/1‑140 (MQ=255)
                                                                                         tACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGAGTTGTTGCAGCGGTTGAAGGa                                               >  2:4377983/1‑140 (MQ=255)
                                                                                          aCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGAGGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAg                                              >  2:10554021/1‑140 (MQ=255)
                                                                                              aCCTCAATGGATATCCTTTCCGTAACCCGGACTACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGATGAAGGAGCTCg                                          <  2:8033080/140‑1 (MQ=255)
                                                                                               ccTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGc                                         >  1:9441272/1‑140 (MQ=255)
                                                                                               ccTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGc                                         >  2:6555624/1‑140 (MQ=255)
                                                                                                  cAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCttt                                      <  1:8894440/140‑1 (MQ=255)
                                                                                                   aaTGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCAGCGCGCGATTGCAGGATGTTCTTGTATATAGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTtg                                     >  2:6025259/1‑140 (MQ=255)
                                                                                                     tGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCTCAAATCTGCGCTCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGATCTCGCTTtgtg                                   <  2:6469154/140‑1 (MQ=255)
                                                                                                         tatccTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAAt                               <  1:7437516/136‑1 (MQ=255)
                                                                                                          atccTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATc                              >  2:8283244/4‑140 (MQ=255)
                                                                                                          atccTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATc                              >  2:9721447/4‑140 (MQ=255)
                                                                                                          atccTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCGTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATc                              >  1:6116535/4‑140 (MQ=255)
                                                                                                           tcctgtCAGTAACCCGGAAGACCCGGGCCGCTAATTCACAAATCTGCGCGCGAGTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCg                             <  1:8222011/135‑1 (MQ=255)
                                                                                                           tccgctCAGCACCCCGCAATACCCGGGCCTCAAATACACAAATCTGCGCGCGATTGCCGGATGTTCTTGTATATCGCCCCGCCAGATAGCCACTACGTCGTGTAGTTGCAGCGGATGAAGGAGCTCGCATTGTGCACTCg                             <  2:1914890/135‑1 (MQ=255)
                                                                                                           tcccttCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCg                             <  1:6563886/136‑1 (MQ=255)
                                                                                                           tccTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCg                             <  1:181457/138‑1 (MQ=255)
                                                                                                             cTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCa                           <  1:3772276/140‑1 (MQ=255)
                                                                                                             cTTTCAGTAACCCGGAAGACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCa                           <  2:9423415/140‑1 (MQ=255)
                                                                                                               ttCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCGTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCGTTGTGCAATCGCAtt                         >  1:1975910/1‑140 (MQ=255)
                                                                                                               tgcAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGAGGGTGAAGGAGCTAGCTTTTTGCAATCGCAtt                         >  2:10106970/3‑140 (MQ=255)
                                                                                                                 ccctAACACGGACTACCCCGGCCGCGACCTCACAAATCTCCGCCCGATCGCACTATGTTCTCGGAGATCGCCCAGCCAGCTTGCCTCTACGTCGAGTTGGAGCAGCGGTTGAAGGAGCTCGCTTGGTGCAATCGCATtct                       <  2:7689016/137‑1 (MQ=255)
                                                                                                                     aaCCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCTGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTcaca                   <  2:6285594/140‑1 (MQ=255)
                                                                                                                      aCCCGGACTACCCGGGCGGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATGTCGCCCAGCCAGATTGCCTCTACGTCGTGTTGATGCTGCGGTTGATGGTGCGGGCTGTGTGCAAGCGGATTCTcagag                  >  2:10389881/1‑137 (MQ=255)
                                                                                                                      aCCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACAt                  >  1:2800538/1‑140 (MQ=255)
                                                                                                                       cccGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCACTCGCATTCTCACAtt                 >  1:10312877/1‑140 (MQ=255)
                                                                                                                       cccGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACAtt                 >  1:6366076/1‑140 (MQ=255)
                                                                                                                       cccGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACAtt                 >  1:8799658/1‑140 (MQ=255)
                                                                                                                       cccGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACAtt                 <  2:10669194/140‑1 (MQ=255)
                                                                                                                       cccGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACAtt                 >  2:1250884/1‑140 (MQ=255)
                                                                                                                         cGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACATTga               >  2:8690155/1‑140 (MQ=255)
                                                                                                                            aaTACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACATTGAGaa            >  2:5447465/1‑140 (MQ=255)
                                                                                                                            aaTACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTCGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACATTGAGaa            >  2:3360456/1‑140 (MQ=255)
                                                                                                                                cccGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACATTGAGAAAAAc        <  1:7802932/140‑1 (MQ=255)
                                                                                                                                cccGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACATTGAGAAAAAc        <  2:6184283/140‑1 (MQ=255)
                                                                                                                                  cGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACATTGAGAAAAACgg      >  2:4665841/1‑140 (MQ=255)
                                                                                                                                   gggCCGCTAATTCACAACTCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACATTGAGAAAAACGGt     <  1:6829178/140‑1 (MQ=255)
                                                                                                                                   gggCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACATTGAGAAAAACGGt     <  1:7939136/140‑1 (MQ=255)
                                                                                                                                     gCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACATTGAGAAAAACGGTTa   <  2:270277/140‑1 (MQ=255)
                                                                                                                                     gCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACATTGAGAAAAACGGTTa   <  2:6940106/140‑1 (MQ=255)
                                                                                                                                     gCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACATTGAGAAAAACGGTTa   >  1:6198784/1‑140 (MQ=255)
                                                                                                                                      ccGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACATTGAGAAAAACGGTTaa  <  1:3484198/140‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                        
GGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCTTTCAGTAACCCGGAATACCCGGGCCGTTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACATTGAGAAAAACGGTTAA  >  NZ_CP025268/3016455‑3016727

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: