| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,131,341 | A→G | *255* (TAA→TAG) | glcC → | transcriptional regulator GlcC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,131,341 | 0 | A | G | 99.9% | 2677.6 / ‑6.1 | 769 | *255* (TAA→TAG) | glcC | transcriptional regulator GlcC |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (334/433); total (335/434) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.36e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 769 total aligned reads displayed.
TTGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAA‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCA > NZ_CP025268/3131204‑3131477 | ttGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAATGCCACCATTTGAGTCGCTCGGCTGTGCCGCTGGAGATGAACCTGAGTTAG‑Ct < 1:7431909/140‑1 (MQ=255)ttGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑Ct < 1:6068632/140‑1 (MQ=255)ttGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑Ct < 2:379105/140‑1 (MQ=255) cGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTAtt > 1:9496823/1‑140 (MQ=255) cGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGAGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTAtt < 1:1403091/140‑1 (MQ=255) gCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTaa > 1:4200052/1‑140 (MQ=255) gCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTaa > 2:2919661/1‑140 (MQ=255) gCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTaa > 1:9903672/1‑140 (MQ=255) gCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTaa > 1:2423872/1‑140 (MQ=255) tGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAAt > 2:5584908/1‑140 (MQ=255) gCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGGGATGAACCTGAGTTAG‑CTGGTATTAAATc > 1:2508231/1‑140 (MQ=255) ccGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCt < 1:6962263/140‑1 (MQ=255) ccGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCt < 1:9135938/140‑1 (MQ=255) cACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCCCGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCt < 1:8592041/140‑1 (MQ=255) cACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCt < 1:8753430/140‑1 (MQ=255) cACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCt < 2:7621557/140‑1 (MQ=255) cAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACa < 2:6994126/140‑1 (MQ=255) cAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACa < 1:2285816/140‑1 (MQ=255) cAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACa < 1:1583603/140‑1 (MQ=255) aGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGCGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACaa < 2:5148765/140‑1 (MQ=255) gcagcaCGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGt < 1:4798063/140‑1 (MQ=255) gcagcaCGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGt < 2:1452871/140‑1 (MQ=255) gcagcaCGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGt < 1:7564424/140‑1 (MQ=255) agcaCGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTa > 2:2523735/1‑139 (MQ=255) gcaCGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAAc < 2:2667848/140‑1 (MQ=255) gcgATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCtt > 1:9629217/1‑140 (MQ=255) gcgATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCtt > 1:5229413/1‑140 (MQ=255) gcgATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCtt > 2:2071254/1‑140 (MQ=255) gcgATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCtt > 1:8346301/1‑140 (MQ=255) aTCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTa > 1:3762976/1‑140 (MQ=255) aTCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTa < 1:512986/140‑1 (MQ=255) tCATGTGCGGACCGTGTAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTAc < 1:5416556/140‑1 (MQ=255) tgtgtgGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGACCCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGc > 2:1322804/1‑140 (MQ=255) tgtgCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGc > 1:1197125/1‑140 (MQ=255) gtgCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCt < 2:9777459/140‑1 (MQ=255) gtgCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCt < 1:8938672/140‑1 (MQ=255) gtgCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCt < 1:9370639/140‑1 (MQ=255) gtgCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCt < 1:655687/140‑1 (MQ=255) gtgCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCt < 1:5502316/140‑1 (MQ=255) gCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTcc > 2:4303839/1‑140 (MQ=255) gCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTcc > 1:3872212/1‑140 (MQ=255) cGGACCGTGAAAAAGAATCGCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCg < 1:10346245/140‑1 (MQ=255) ggACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGc < 2:7808328/140‑1 (MQ=255) aCCGTGAAAAAGAATCTCCACGATATCGAGCTGGCAGGCCACCATTTGAGTCGCTCGGCGGTGCCGCTGGAGAAGAACCTGAGTGAG‑CTGGTATTACATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGccc < 2:411892/140‑1 (MQ=255) aCCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGccc > 1:7818511/1‑140 (MQ=255) aCCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGccc < 2:1208022/140‑1 (MQ=255) aCCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGccc > 1:337886/1‑140 (MQ=255) aCCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGccc > 1:3619030/1‑140 (MQ=255) cGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCa > 1:7204676/1‑140 (MQ=255) cGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCa > 2:10826620/1‑140 (MQ=255) gTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCaa > 1:2983464/1‑140 (MQ=255) tGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAGCCTG‑GTTAAGCTGCAATCAAAGCTGCAGTTCATAATATCGGTCACGCTAGTACGGCTCCGcccctac > 1:10710570/1‑137 (MQ=255) tGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCact > 2:5328507/1‑138 (MQ=255) gAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATg > 2:4520266/1‑140 (MQ=255) aaTCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCa > 2:818427/1‑140 (MQ=255) aaTCTCCACGATATCGAGCTGGAAGGCCACCATTAGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTAAG‑CTGGTATTAAATCTGCTTTACATACAAACGCTAACGCTTGTAAGGCTCAGCCCCAATGCgaacca > 2:5928617/1‑135 (MQ=255) aaTCTCCACGAGATCGAGCTGGAAGGCCACCATTTGAGTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATCAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCa < 2:8555047/140‑1 (MQ=255) ccACGATCTCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGATCCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATg < 1:10247684/140‑1 (MQ=255) ccACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATg < 2:7963049/140‑1 (MQ=255) atatCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTAtt > 2:6362449/1‑140 (MQ=255) atatCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTAtt > 2:1724996/1‑140 (MQ=255) atCGAGCTGGTAGGCCTCCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATGACATCTGCTTTTCATACAATCGGTACCGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCa < 2:6600068/140‑1 (MQ=255) cGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATg > 2:4888614/1‑140 (MQ=255) cGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATg < 2:8465137/140‑1 (MQ=255) cGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATg < 1:2007746/140‑1 (MQ=255) gAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGc < 1:10016104/140‑1 (MQ=255) aGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGcc > 1:6239355/1‑140 (MQ=255) aGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGcc < 2:10639749/140‑1 (MQ=255) gAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTAt > 1:6432185/1‑140 (MQ=255) gAAGGCCACCATTTGATTAGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAAGCTGCTTTTCAGACACTCGGTCACGCGAGTACGGCTCCGCCCCAATGCGTTCCAGCCTGTTAGTCATGccggaag > 2:6178051/1‑135 (MQ=255) aaGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGTTGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTAtt < 2:9446824/140‑1 (MQ=255) aGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTg > 2:2229830/1‑140 (MQ=255) aGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTg > 1:4658379/1‑140 (MQ=255) ggCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTgg < 1:7887263/140‑1 (MQ=255) gCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGt < 2:10303262/140‑1 (MQ=255) ccaccaTTTGATTCGCTCGGCGTTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCTCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGtt < 2:3104045/140‑1 (MQ=255) ccaccaTTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGtt > 1:1792893/1‑140 (MQ=255) ccaccaTTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGtt > 2:8771362/1‑140 (MQ=255) caTTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTGCGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGa < 1:10816997/140‑1 (MQ=255) caTTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGa < 1:2776532/140‑1 (MQ=255) aTTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAg > 1:10453371/1‑140 (MQ=255) aTTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGATTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAg < 2:3238718/140‑1 (MQ=255) aTTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATcc < 2:7266635/140‑1 (MQ=255) tCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCAt < 1:5643932/140‑1 (MQ=255) cGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGTTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATg < 2:9243995/140‑1 (MQ=255) gCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGa > 2:3601493/1‑140 (MQ=255) cTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGAc > 2:1826461/1‑140 (MQ=255) cTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGAc < 1:3067938/140‑1 (MQ=255) cTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAAGGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGAc < 2:5264412/140‑1 (MQ=255) cggcggTGCCGCTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACAt < 1:447642/140‑1 (MQ=255) cTGGAGATGAACCTGAGTTAG‑CTGGTNTTAAATCNGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGANCCATGCCATCTCCAGCGCAt < 1:5849521/140‑1 (MQ=255) cTGGAGATGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCAt < 2:9606644/140‑1 (MQ=255) gaTGAACCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATc > 2:10114951/1‑140 (MQ=255) aaCCTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTcc > 1:4023162/1‑140 (MQ=255) ccTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCcgg < 1:5064630/140‑1 (MQ=255) ccTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCcgg < 1:8096530/140‑1 (MQ=255) ccTGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCcgg < 1:3239303/140‑1 (MQ=255) tGAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCcggcg > 1:9810626/1‑140 (MQ=255) gAGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCcggcgg > 1:8467925/1‑140 (MQ=255) aGTTAG‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCggg < 2:4692452/140‑1 (MQ=255) | TTGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAA‑CTGGTATTAAATCTGCTTTTCATACAATCGGTAACGCTTGTACGGCTCCGCCCCAATGCGTTCCAGCATGTTATTCATGCCTGTATTGGTTTCGAGGATCCATGACATCTCCAGCGCATCGATCTTCCGGCGGGCA > NZ_CP025268/3131204‑3131477 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |