| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,988,608 | T→C | *399* (TAA→TAG) | hemY ← | protoheme IX biogenesis protein HemY |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,988,608 | 0 | T | C | 99.4% | 1723.0 / NA | 499 | *399* (TAA→TAG) | hemY | protoheme IX biogenesis protein HemY |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (337/157); minor base G (3/0); total (342/157) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.55e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 501 total aligned reads displayed.
ACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAATTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCATGCGTAATCGTAGGCGTCCGGACGTTGTTTCA > NZ_CP025268/3988471‑3988741 | aTGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATACGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGCGTTGCTTGCCTCCGGGTGAGAAGGACCTACtg > 2:3103629/1‑140 (MQ=255) aTGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACtg > 1:9213688/1‑140 (MQ=255) aTGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAAGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACtg > 1:9713816/1‑140 (MQ=255) tGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACtgt > 1:887374/1‑140 (MQ=255) ggACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACtgtg < 2:9756182/140‑1 (MQ=255) ggACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACtgtg < 1:3770917/140‑1 (MQ=255) ggACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑ATTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACtgtg < 1:6836037/140‑1 (MQ=255) acacAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGc < 1:4586548/140‑1 (MQ=255) aaCGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTGTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGt > 1:3042957/1‑140 (MQ=255) aaCGATGAGTGAAGCACCCACTTGTTGGCAGACCGACCTGTGTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTAACAGGAAGGCCCCGGGTGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGt > 2:6527333/1‑140 (MQ=255) aCGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGtt > 2:3412474/1‑140 (MQ=255) aCGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGtt > 1:735234/1‑140 (MQ=255) aCGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCGCCGGGTGAGACGGACCTACTGTGGCGGGtt > 2:6242865/1‑140 (MQ=255) cGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTa < 2:4199649/140‑1 (MQ=255) ttGAGTGAAGCACCCACGTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTAtt < 2:2298859/140‑1 (MQ=255) tGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTACTAAGAGCAGGAG‑TTTTTTTATGTCTCAGGAAGTCCCCGGAGGTGCTTTCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTc > 2:2071278/1‑140 (MQ=255) tGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGACCTACTGTGGCGGGTTGTTc > 1:3254273/1‑140 (MQ=255) gAGTGAAGCACCCACGTGTTGTCATACAGACCGGTTTTAACGCCTGCTCCGTAATAAGAGAAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCGTGCCTCCGGGTGAGAAGGAACTACTGTGTCGGGTTAGTCt > 2:1479583/1‑140 (MQ=255) gTGAAGCACACACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCACCGGGTGAGAAGGAACTAATGTGGCGGGTTATTCTGc > 1:6763387/1‑140 (MQ=255) aGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACg > 1:2603744/1‑140 (MQ=255) gCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGt < 1:1614790/140‑1 (MQ=255) cACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGtt > 1:1951916/1‑140 (MQ=255) ccACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAAc > 1:8580447/1‑140 (MQ=255) ttgttgTCATACAGACCTGTTTTATCGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTGATTCTGCAACGTTAACATCa > 2:7471969/1‑140 (MQ=255) ttgttgTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGGATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCa > 2:10048276/1‑140 (MQ=255) tgttgtCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCaa < 1:5539666/140‑1 (MQ=255) gttgtCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCaaa < 1:10177421/140‑1 (MQ=255) tcgtACAGACCGGGGTTGACGCCTGCTGCGTAAGACGCGCAGGCG‑TTTTTGTCTGGAGCAGGAAGGCCCCGGAGGTGCGTGCCGCCGGGGGAGGAGGCACTACTGGGGCGGGTGCTGCTGCCACGTTCTCAGCAATCCgg > 2:8501839/4‑139 (MQ=255) tCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGt > 2:533169/1‑140 (MQ=255) tCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGt > 1:5776268/1‑140 (MQ=255) aTACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTcg > 1:612101/1‑140 (MQ=255) aTACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTcg > 1:2752205/1‑140 (MQ=255) aTACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTcg < 2:7736741/140‑1 (MQ=255) aTACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑ATTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTcg < 1:9577645/140‑1 (MQ=255) aCAGACCTGTGTTTACGCCTGCGCCGTAATCAGAGCAGGCG‑TGTTTTTATGGCTCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGACGGACCTCCTGTGGCGGGGTATGCTGCACCGGTAACCGCAAGCCGGcgcg > 2:9009774/1‑140 (MQ=255) gACCTGTTTTAACGCCTGCTCCGTAATAAGAGGAGGCG‑TTGTTTTATGGAGCAGGTAGGCCGCGGAGTTGGTTGCCTCCTGTGGAGACGGCACTCCTGGGGAGGGTGAGTCTGACACGTGATCATCTAGACGGCGCGACg > 2:6072225/1‑140 (MQ=255) gACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATAGGGAAGGCCCCGGAGGTGCTTGCCTCCGGGGGAGAAGGAACTACTGTGGCGGGGTATTCNGCAACGTTAACATCAAACCGTCGCGACg > 1:5882080/1‑140 (MQ=255) aCCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGc > 1:10054385/1‑140 (MQ=255) aCCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGc > 2:579691/1‑140 (MQ=255) aCCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATAAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGc > 1:4913970/1‑140 (MQ=255) ccTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCa < 1:6982064/140‑1 (MQ=255) cTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑TGTTTTTATGTATAAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGGGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCAt > 1:2095141/1‑140 (MQ=255) gTTTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAg > 2:10844538/1‑140 (MQ=255) gTTTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAg > 1:6491172/1‑140 (MQ=255) gTTTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGGTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAg > 1:9387976/1‑140 (MQ=255) ttttAACGCCTGCTCCGTAATAAGAGCTGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCGGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAATCCGTCGCGACGCATAGc > 1:6655175/1‑140 (MQ=255) ttttAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTcg > 2:9398387/1‑129 (MQ=255) ttttAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGc > 2:81572/1‑140 (MQ=255) ttttAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGc > 1:5137897/1‑140 (MQ=255) ttttAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGc > 1:8192442/1‑140 (MQ=255) aCGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAg < 2:7603208/140‑1 (MQ=255) aCGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAg > 1:10925201/1‑140 (MQ=255) aCGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAg > 1:2343910/1‑140 (MQ=255) cGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGc < 1:10735100/140‑1 (MQ=255) cGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGc < 1:7570578/140‑1 (MQ=255) cGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCCCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGc < 2:8718268/140‑1 (MQ=255) gCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGGTAACATCAAACCGTCGCGACGCATAGCTGCAGct > 1:4711008/1‑140 (MQ=255) tGCTCCGTAATAAGAGCAGTCG‑TTTTTTTATGTATCAGGAAGTCCCCGGAGGTGCTTGCCTACGGGTGAGAAGGAACTACTGTGGCGGGTTATTATGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGattct > 2:2698090/1‑140 (MQ=255) tGCTCCGTAATAAGAGCAGGCGTTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGACCTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGcttc > 2:4647767/1‑140 (MQ=255) tGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGcttct > 1:1717248/1‑140 (MQ=255) tCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTcc < 2:3149873/140‑1 (MQ=255) gTAATAAGAGCAGGCG‑ATTTTTTATGTATCAGGAAGGCCCCTGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGc < 2:5579072/140‑1 (MQ=255) taaGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAACCCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTtgt < 2:7121722/140‑1 (MQ=255) agagCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGc < 1:902224/140‑1 (MQ=255) agagCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACAACTGTGGCGGGTTTTTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCGTCTTCCGGCTTGTGc > 1:4159612/1‑140 (MQ=255) gagCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCa > 2:1147448/1‑140 (MQ=255) gagCAGGCG‑TTTTTGTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCa > 1:5278471/1‑140 (MQ=255) gCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGt < 1:1800025/140‑1 (MQ=255) gCAGGCG‑TTTTTGTATGTCTCAGGAATGCCCCGGAGGTGCTTGCCTGCGGGTGAGAAGGAACTACTGTGGCGGGTGATTATGCAACGTTATCATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGt > 2:6767516/1‑140 (MQ=255) aGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCt > 1:8373942/1‑140 (MQ=255) aGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATACTGCAACGTTAACATCAAACAGTCGCGACGCATAGCTGCAGCTTCTTCCGGCGTGTGCAGTCt > 2:6656132/1‑140 (MQ=255) ggCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGc > 2:2425582/1‑134 (MQ=255) atgagtatttttATCTATCAGGAAGGCCCCGGAGGTGCATGCCACCGGGTGAGAAGGAACTAATGATGCGGGTTATTCTGCCACTGTAACATCAAAACGTCTCGAAGCATAGCTGCAGATTCTTCCCGCTTGTGCAGTCt > 2:914401/8‑140 (MQ=255) gCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGGGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCGTGTGCAGTCTGt > 1:6313852/1‑140 (MQ=255) ttttATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAgcg < 2:3871133/140‑1 (MQ=255) ttATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCTACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTACTTCCGGCTTGTGCAGTCTGTCCAGcgcg < 2:4777207/140‑1 (MQ=255) aTGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTc > 1:4343053/1‑140 (MQ=255) gTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCgg > 2:10504060/1‑140 (MQ=255) tATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGc < 1:133819/140‑1 (MQ=255) cAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAg < 2:3709326/140‑1 (MQ=255) ggAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGcc < 2:1880850/140‑1 (MQ=255) ggAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGcc > 1:10425430/1‑140 (MQ=255) ggCCCCGGAGGTGCGTGCCTCCGGGTGAGAAGGAACGACTGTGGCGGGTGATTCTGCACCGTTAACCTCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCATGc < 2:837112/140‑1 (MQ=255) gCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCATGCg > 1:8033776/1‑140 (MQ=255) gCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCATGCg < 1:10599643/140‑1 (MQ=255) gCCCCGGAGGTGCTTGCCGCCGGGTGAGAAGGACCTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCCGCGCGGCGGCACGCCAGGCg > 2:1750949/1‑140 (MQ=255) ccccGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCATGCGt > 2:1623241/1‑140 (MQ=255) cccGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCATGCGTa > 1:5017023/1‑140 (MQ=255) cccGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCATGCGTa > 1:3488121/1‑140 (MQ=255) cccGGAGGTGCTTGCCTCAGGGTGAGACGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCCTGCGTa > 2:5176968/1‑140 (MQ=255) ccGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTAATCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCATGCGTaa > 2:443467/1‑140 (MQ=255) ggTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCATGCGTAATCGTa > 2:4909736/1‑140 (MQ=255) cTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCATGCGTAATCGTAGGCg > 1:7862212/1‑140 (MQ=255) cTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCATGCGTAATCGTAGGCg > 1:3601577/1‑140 (MQ=255) tCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCACCGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCATGCGTAATCGTAGGCGTCCGGa < 2:10651009/140‑1 (MQ=255) ccGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCATGCGTAATCGTAGGCGTCCGGAc > 2:2990561/1‑140 (MQ=255) cGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCATGCGTAATCGTAGGCGTCCGGACg > 1:7714754/1‑140 (MQ=255) cGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGAGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCATGCGTAATCGTAGGCGTCCGGACg > 1:7197665/1‑140 (MQ=255) gggTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCATGCGTAATCGTAGGCGTCCGGACgt < 1:2902040/140‑1 (MQ=255) agaAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCATGCGTAATCGTAGGCGTCCGGACGTTGttt > 1:3946329/1‑140 (MQ=255) | ACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCG‑TTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAATTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGTCTGTCCAGCGCGTCGGCAAGCCATGCGTAATCGTAGGCGTCCGGACGTTGTTTCA > NZ_CP025268/3988471‑3988741 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |