| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,855,625 | +C | intergenic (+116/‑50) | sppA → / → ansA | signal peptide peptidase SppA/asparaginase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,855,621 | 1 | . | C | 98.0% | 2082.3 / 28.4 | 612 | intergenic (+112/‑54) | sppA/ansA | signal peptide peptidase SppA/asparaginase |
| Reads supporting (aligned to +/- strand): ref base . (6/6); new base C (236/362); total (242/370) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.55e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 647 total aligned reads displayed.
TGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCT‑C‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTG > NZ_CP025268/1855483‑1855755 | tGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCT‑c > 1:3586602/1‑140 (MQ=255)tGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCT‑c > 1:7335650/1‑140 (MQ=255) ccTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCT‑c‑cc < 1:4415069/140‑1 (MQ=255) cTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCT‑c‑ccc < 1:2442657/140‑1 (MQ=255) gACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCT‑c‑cccct > 1:11225433/1‑138 (MQ=255) gACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCT‑c‑cccct > 2:11595626/1‑138 (MQ=255) gACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTACTTATCAGCATAGTATCAGGTGCGCT‑c‑cccct > 1:5517669/1‑138 (MQ=255) ccTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCT‑c‑cccctgc < 2:4361102/140‑5 (MQ=255) tGCTCCAACATTCGTTAAGTTTTGTTCTGATTTGCCGAGATATGGTAGGCCACATTATTTTTTAAGTCGACGAATCCTCTTACCGATGTTTCTCCCCATATTTCCTTATCCGCATAGTATCAGGTTCGCT‑c‑cccctgcgt < 2:5081227/140‑7 (MQ=255) tGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGCATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCt < 1:5623923/140‑1 (MQ=255) tGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCt < 1:6505001/140‑1 (MQ=255) tGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCt < 2:6590425/140‑1 (MQ=255) gcgcCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTc > 1:7805679/1‑140 (MQ=255) cgcCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCa > 2:1948964/1‑140 (MQ=255) cgcCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCa > 1:5136196/1‑140 (MQ=255) gcCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCGTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCAc < 2:6874828/140‑1 (MQ=255) cATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGtata < 1:1910876/140‑1 (MQ=255) cATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGtata > 1:10129205/1‑140 (MQ=255) aaGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTGACGTCGACGAATCCTCTTCCCGCGGTTTCGCCCCATATTTCCGTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTg < 2:9453430/140‑1 (MQ=255) aGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGc < 1:8353389/140‑1 (MQ=255) gTCCTGGACTGAGTGGCCGACAGATCGTCGGCCACAATATATTTTACGTCGACGAATCCTCTGCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGct < 1:6281761/140‑1 (MQ=255) tGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCttt > 2:8620212/1‑140 (MQ=255) tGTACTGAGGGGCCGACAGCTCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCttt < 2:8786835/140‑1 (MQ=255) gTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTc > 2:5760981/1‑140 (MQ=255) gTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCAGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTc > 1:10883189/1‑140 (MQ=255) tGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGata < 1:9918394/140‑1 (MQ=255) aGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATAtc > 1:8881649/1‑140 (MQ=255) aGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATAtc > 2:6096327/1‑140 (MQ=255) tGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATAtcat > 1:105405/1‑140 (MQ=255) ggCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 2:1734424/140‑1 (MQ=255) ggCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 1:10277269/140‑1 (MQ=255) ggCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 1:1989581/140‑1 (MQ=255) ggCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 2:10946687/140‑1 (MQ=255) ggCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 2:3041540/140‑1 (MQ=255) ggCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 1:1843673/140‑1 (MQ=255) ggCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 2:7972384/140‑1 (MQ=255) ggCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 1:771615/140‑1 (MQ=255) ggCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 1:2949937/140‑1 (MQ=255) ggCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 1:9407396/140‑1 (MQ=255) ggCCGACAGATCGTCGGCCACATTATATTTTCCGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 1:11458626/140‑1 (MQ=255) ggCCGAAAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCACCATATTTACTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTTCCTCACGTATATACTTTTGATCTTTCGATAtcatt < 2:484746/140‑1 (MQ=255) ccGACAGATCGTTGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATAtcattca > 1:1605891/1‑140 (MQ=255) aCAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGata < 2:7810829/130‑1 (MQ=255) aCAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCatat < 1:4581012/140‑1 (MQ=255) tcgtcgGCCACAATATTTATTACGTCGACGCATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTCTCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCatatcaata < 2:8389230/140‑1 (MQ=255) gCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGc > 1:5683093/1‑140 (MQ=255) attattTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAg > 2:10704139/1‑140 (MQ=255) tattTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGaa < 1:8578389/140‑1 (MQ=255) tattTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGaa < 1:3827020/140‑1 (MQ=255) attTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGaaa < 2:268678/140‑1 (MQ=255) gTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTAc < 1:8146415/140‑1 (MQ=255) gTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTAc < 1:10000007/140‑1 (MQ=255) gTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTAc < 2:3488595/140‑1 (MQ=255) tCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCATGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACg < 1:7870449/140‑1 (MQ=255) tCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACg < 2:2110604/140‑1 (MQ=255) cgacgaATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGt > 2:9340218/1‑140 (MQ=255) gacgaATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGtt < 2:518254/140‑1 (MQ=255) ttCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCt < 2:11259637/61‑1 (MQ=255) ttCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCTCGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACAcggg < 2:4485872/140‑1 (MQ=255) cGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACAcgggcggg < 1:4759556/140‑1 (MQ=255) gTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCa > 2:7500997/1‑140 (MQ=255) tttCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCAt < 1:2776046/140‑1 (MQ=255) tCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCg < 2:322230/140‑1 (MQ=255) cGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt > 2:4661054/1‑81 (MQ=255) gCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCggg < 2:1365280/140‑1 (MQ=255) gCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCggg < 1:10704139/140‑1 (MQ=255) cccccAGATGTCCTTCGCCGCATAGTATCACGTGCGCT‑CACCCTGCCTCCCGTATCTACTTTTGCTCTTTCGAGATCATTCATCTCAATATCATGCAAAAGAAATCACTTGACGTTGCCTACACGGGCGGGACCATCggg < 2:9704549/139‑1 (MQ=255) tatTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAg < 2:8160670/140‑1 (MQ=255) tatTTCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAg > 1:1437271/1‑140 (MQ=255) tCCTTATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGtt < 1:3684322/140‑1 (MQ=255) tATCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGa > 1:5353703/1‑140 (MQ=255) aTCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCaa < 1:8765115/93‑1 (MQ=255) aTCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAg < 1:3445412/140‑1 (MQ=255) aTCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAg > 2:3893893/1‑140 (MQ=255) aTCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAg < 2:10437119/140‑1 (MQ=255) aTCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTAAATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGAGATGCAGCGTTCCGAg > 2:4055040/1‑140 (MQ=255) aTCCGCAGAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAg < 1:7547528/140‑1 (MQ=255) tCCGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGCTATCATTCATATCAATATCCTGCAAAAGAAATCGATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCCGCGGTCCGAGc > 2:10035798/1‑140 (MQ=255) ccGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACCCGGGCGGGACCATCGGGATGCAGCGTTCCGTGCa < 2:2849615/140‑1 (MQ=255) ccGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCa < 1:9039166/140‑1 (MQ=255) ccGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCa < 2:1601901/140‑1 (MQ=255) ccGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCa < 2:2385796/140‑1 (MQ=255) ccGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCa < 1:4065953/140‑1 (MQ=255) ccGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCa < 1:9772432/140‑1 (MQ=255) ccGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCa < 2:3681277/140‑1 (MQ=255) ccGCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCa < 1:313899/140‑1 (MQ=255) gCATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAgg > 2:11103060/1‑140 (MQ=255) cATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAggg > 2:3386211/1‑140 (MQ=255) cATAGTATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAggg < 1:2279770/140‑1 (MQ=255) tATCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTtata > 2:6006300/1‑140 (MQ=255) aTCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTtatat > 1:9134006/1‑140 (MQ=255) tCAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCa < 2:2464118/130‑1 (MQ=255) cAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATAc < 1:11629297/140‑1 (MQ=255) cAGGTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATAc < 2:9778778/140‑1 (MQ=255) cAGGTGCGATAC‑CCCTTCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATAc < 2:9007855/140‑1 (MQ=255) ggTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCg > 2:7285941/1‑140 (MQ=255) ggTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCg > 1:4311617/1‑140 (MQ=255) ggTGCGCTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGG‑TATATACCgg > 2:10196408/1‑140 (MQ=255) gcgcTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGgtg > 1:6847394/1‑140 (MQ=255) gcgcTCC‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGgtg > 2:5533022/1‑140 (MQ=255) | TGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCT‑C‑CCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTG > NZ_CP025268/1855483‑1855755 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |