| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,773,671 | (C)5→6 | intergenic (+161/‑55) | yfjQ → / → yfjR | DUF932 domain‑containing protein/WYL domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,773,666 | 1 | . | C | 95.5% | 2219.7 / 90.0 | 695 | intergenic (+156/‑60) | yfjQ/yfjR | DUF932 domain‑containing protein/WYL domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base . (25/6); new base C (427/234); total (453/242) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.17e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 769 total aligned reads displayed.
CGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑C‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGT > NZ_CP025268/2773527‑2773800 | ttgttATTATCGGACACCACCTGTCCGCATCGCTATGTGATCGTGTGCCTAAATACCCCGTTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑c‑c < 2:1732167/140‑1 (MQ=37) gttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑c‑ccc < 1:9611593/140‑1 (MQ=255) ttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑c‑cccc < 2:10606487/140‑1 (MQ=255) ttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑c‑cccc < 1:7326061/140‑1 (MQ=255) ttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑c‑cccc < 1:2304899/140‑1 (MQ=255) ttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑c‑cccc < 2:728735/140‑1 (MQ=255) ttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTGTTAACCCCCGTTACATCTGGCTTTTGCAGAACTTAAAAATAGTGGCTGCGTTGTCCATACCCTGTCCG‑c‑cccc > 2:4813524/1‑140 (MQ=37) ttAATAACGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTGACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑c‑cccc < 1:8293209/140‑1 (MQ=255) tCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCttt < 2:1479991/140‑1 (MQ=255) cGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATACCCCGGTTATAGCTGTTAACACCCGTTCCATCTGGCTTTTGCAGAAATAAAAAAATGGTTCTGCGTTGTCCATACCCTGACGG‑c‑cacccacggta > 1:3689627/1‑133 (MQ=37) acacCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTGATTGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTGTCTGCGTTGGCCAGACGCTGTGCG‑CGCCCCTCTGTattg > 1:6703479/1‑137 (MQ=25) acacCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTGATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTATAg > 2:4657916/1‑140 (MQ=255) accaccTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCATTTGCAGCAATACAAAAGAGTTTCTGCGTAGTCCATACCCTGTCCGCC‑CCCCGCTTAAAAGTa > 2:9081799/1‑140 (MQ=37) gTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCAcat < 1:7030636/140‑1 (MQ=255) cATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTGTAAAGTAAGGACATCAttt > 1:5519340/1‑140 (MQ=255) cGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTtca < 2:9339182/140‑1 (MQ=255) tATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCGCTTTAAAGTAATCAGATCATTTtcagtc > 1:4087419/1‑140 (MQ=255) gCTCGTGTGCCTCAATCCCCCGGGTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATTGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTGAAGTAAGCACATCCTTTTCAGGCAGTTa > 1:11439296/1‑140 (MQ=255) cTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTaa < 2:737292/140‑1 (MQ=255) tCGTGTGCCTCAATCCCCCGGTTCTAGCTGTTAACCCCCGTTACATCTGGCGTTTGCCGAAATAATAAATAGTTTCTGCGTTGTCCAGTCCCTGTCCG‑C‑CCCGTCTTTAAAGTAATCAGATCATTTGCAGTGCGGTAACt > 1:6262209/1‑140 (MQ=255) tCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGtt < 1:6500038/137‑1 (MQ=255) tCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGtt > 2:6500038/1‑137 (MQ=255) tCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑C‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACt > 1:7691834/1‑140 (MQ=255) tgtgCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACttt > 2:3584751/1‑140 (MQ=255) tgCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTAGATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCGCGGTCATGTAATCACATCATTGTCAGTCAGTGCACTTTcg > 1:4698531/1‑139 (MQ=255) tgCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAATTATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTGAACTTTcc > 2:9208860/1‑140 (MQ=18) tgCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTcc < 2:7135921/140‑1 (MQ=255) tgCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATGTTCAGTCAGTTATCTTTcc > 2:7760218/1‑140 (MQ=255) ccTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCGCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTg > 2:11606641/1‑140 (MQ=255) tCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGga < 1:8554368/140‑1 (MQ=255) aTCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTACTCACATCATTTTCAGTCAGTTAACTTTCCTGGAGaa > 1:1492296/1‑140 (MQ=255) aTCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGaa < 1:8965339/140‑1 (MQ=255) aTCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGaa < 1:7866776/140‑1 (MQ=255) tCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAt < 2:8226719/140‑1 (MQ=255) cccccGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAtc < 1:3138327/140‑1 (MQ=255) cccGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCATTCAGTTAACTTTAATGGAGAAtatc > 2:8717755/1‑140 (MQ=17) cGGTTATAGCTTTTAACCCCCGTTACCTCTGGCTTTTGCAGAAATAAAAAAGAGGTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAtctctc < 2:9759882/140‑1 (MQ=18) ttATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATg > 2:8897167/1‑140 (MQ=255) ataGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCCGTTAACTTTCCTGGAGAATCTCTCATGac > 1:11171353/1‑140 (MQ=255) aGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGGCAGTTAACTTTCCTGGAGAATCTCTCATGacac > 1:9778432/1‑140 (MQ=255) ttAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCa > 2:5017037/1‑140 (MQ=255) ttAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTGTATAGTAATCACATCATTTTCAGTCAGTGAACTTTCCTGGAGAATCTCTCATGACACAGGCa > 2:2010263/1‑140 (MQ=17) tAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGACTCTCTCATGACACAGGCAg > 1:7508414/1‑140 (MQ=255) tAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAg > 1:10438361/1‑140 (MQ=255) tAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAg > 1:11364205/1‑140 (MQ=255) tAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAg > 1:2767933/1‑140 (MQ=255) ccccGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAAcg < 1:6018320/140‑1 (MQ=255) ccccGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAAcg < 1:4856919/140‑1 (MQ=255) ccccGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGACAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAAcg < 2:2851833/140‑1 (MQ=255) cGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAAcgccg > 1:3905233/1‑140 (MQ=255) gTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCGGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAAcgccgc < 1:3426844/140‑1 (MQ=255) ggCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACt > 2:2159225/1‑93 (MQ=255) ggCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGACTCTCTCATGACACAGGCAGAACGCCGCCATGACCgg > 2:6049296/1‑140 (MQ=255) ggCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCgg > 1:9914037/1‑140 (MQ=255) gCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGACCATACCCTGTCCGCC‑CCCCTCTTTAAAGGAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCggc < 2:1079426/140‑1 (MQ=255) ttGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCggctggc > 2:7960841/1‑140 (MQ=255) tGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCggctggct > 1:1861860/1‑140 (MQ=255) cAGAAATAAAACAGAGTGTCTGCGTTGTCCAGACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTGTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgt < 1:2700076/140‑1 (MQ=14) aaaTAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgtcag > 1:5886141/1‑140 (MQ=255) tAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgtcaggct < 1:4248410/140‑1 (MQ=255) tAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgtcaggct < 2:5639381/140‑1 (MQ=255) aaaaaTAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAACGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgtcaggctgt < 1:1025202/140‑1 (MQ=255) aaTAGTTTCTGCGTTGTCCAGACCCTGACCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATTACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCAc < 2:7607896/140‑1 (MQ=14) tttCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATa > 2:1028145/1‑140 (MQ=255) ttCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATaa > 1:1289977/1‑140 (MQ=255) tCTGCGTTGTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAAt < 1:1656394/140‑1 (MQ=255) gCGTTGTCCAGACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAg < 1:10816451/140‑1 (MQ=255) gTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTc > 2:1587077/1‑140 (MQ=255) gTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTc > 2:6277103/1‑140 (MQ=255) gTCCATACCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTc > 2:52363/1‑140 (MQ=255) aCCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTg > 2:3404676/1‑140 (MQ=255) aCCCTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTg > 1:5087584/1‑140 (MQ=255) aCCCGGTCCGCC‑CCCCTCTTTAAACTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTg < 1:4473391/140‑1 (MQ=255) cccTGTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGc > 2:11159177/1‑140 (MQ=255) gTCCGCC‑CCCCTCTTTCAAGTAATCACATCATTTTCAGTCCGTTAACTTTCCTGGCGTCTCTCTCGTGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGGTGGCACTGATAATCTGCCGTCGGGTTGCgggg > 2:6135607/1‑139 (MQ=14) gTCCGCC‑CCCCTCTTTAAAGTAATCCCATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:3867326/1‑140 (MQ=255) gTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAtc < 1:8139018/61‑1 (MQ=255) gTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCAt > 2:4179675/1‑67 (MQ=255) gTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACGGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGGCCCTGATAATCTGCCGTCGGGTTGCgggg > 1:9177512/1‑139 (MQ=14) gTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:8551881/1‑140 (MQ=255) gTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:299068/1‑140 (MQ=255) gTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:10961447/1‑140 (MQ=255) gTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:4973836/1‑140 (MQ=255) gTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:9529178/1‑140 (MQ=255) gTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:10049909/1‑140 (MQ=255) gTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:5408473/1‑140 (MQ=255) gTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:6816979/1‑140 (MQ=255) gTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:8406166/1‑140 (MQ=255) gTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:8754783/1‑140 (MQ=255) gTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:5934966/1‑140 (MQ=255) gTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:511993/1‑140 (MQ=255) gTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:11313182/1‑140 (MQ=255) gTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:11428981/1‑140 (MQ=255) gTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:3027896/1‑140 (MQ=255) gTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:2589464/1‑140 (MQ=255) gTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt < 2:2377759/140‑1 (MQ=255) gTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGGTGCGGGt > 2:5408066/1‑140 (MQ=255) gTCCGCC‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACCGATAATCAGCCGTCTGGTTGCGGGt > 2:4313383/1‑140 (MQ=255) gTCCGCC‑CCCCTCTTTAAAGTAATCAAATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTATCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:2570234/1‑140 (MQ=255) gTCCGCC‑CCCCTCGTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:1345696/1‑140 (MQ=255) | CGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑C‑CCCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGT > NZ_CP025268/2773527‑2773800 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |