| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,014,858 | +G | intergenic (+159/+61) | arcC → / ← yqeB | carbamate kinase/selenium‑dependent molybdenum cofactor biosynthesis protein YqeB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,014,857 | 1 | . | G | 99.0% | 1747.0 / NA | 515 | intergenic (+158/+62) | arcC/yqeB | carbamate kinase/selenium‑dependent molybdenum cofactor biosynthesis protein YqeB |
| Reads supporting (aligned to +/- strand): ref base . (2/2); major base G (234/272); minor base T (0/5); total (236/279) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.57e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 536 total aligned reads displayed.
TACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCA‑G‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTCAAGTACG > NZ_CP025268/3014720‑3014991 | tACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCA‑gg > 1:1295444/1‑139 (MQ=255) aCCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCA‑ggc > 2:8517752/1‑138 (MQ=255) aCCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCA‑ggc > 1:8111240/1‑138 (MQ=255) aCCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCA‑ggc > 1:9256876/1‑138 (MQ=255) ccATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCA‑ggca > 1:10678131/1‑137 (MQ=255) ccATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCA‑ggca > 1:5483793/1‑137 (MQ=255) tCCGGCCAAAGATTGTCATGTAAGTGCGCTATGTTGATGCAGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTCATAAGCGTAGCGCATCA‑ggcaagt > 1:7183270/1‑134 (MQ=25) tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAAtt > 1:1021606/1‑140 (MQ=255) tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAAtt > 2:9123988/1‑140 (MQ=255) tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAAtt > 2:8316234/1‑140 (MQ=255) tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAAtt > 1:3357765/1‑140 (MQ=255) tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCA‑ggcaatg > 2:8018161/1‑134 (MQ=255) tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTGGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAAtt > 1:3589463/1‑140 (MQ=255) tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTGGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAAtt > 1:488908/1‑140 (MQ=255) ccGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAAttt > 2:3919753/1‑140 (MQ=255) ccGGCCAAAGATTGTCAAGAAAGAGCCCGTTGATGATGCCGGATGCGCCGCGACCGCCTTATCCGACCTACAAAACATCGCCAAATCAATCGCTAGCACTGCACTTGTAGGCCTGATAAGCAAAGCGCATCAGG‑CAAttt > 2:2546593/1‑140 (MQ=19) ggCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTgg < 1:8488413/140‑1 (MQ=255) aaaGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGtt < 1:10057483/140‑1 (MQ=255) aaaGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGtt < 1:3442239/140‑1 (MQ=255) tGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGtcat < 1:4753413/140‑1 (MQ=255) tGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGtcat < 1:4267828/140‑1 (MQ=255) tGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGtcat < 2:10066029/140‑1 (MQ=255) tGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGtcat < 1:11344147/140‑1 (MQ=255) gtaagtGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGtct < 1:993042/140‑1 (MQ=255) agtGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAg > 1:9775078/1‑140 (MQ=255) agtGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAg > 2:7531874/1‑140 (MQ=255) gtGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGTGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAgg < 1:1881196/140‑1 (MQ=255) gtGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAgg < 1:5069099/140‑1 (MQ=255) tGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGc < 2:6000103/140‑1 (MQ=255) gcgcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGcc > 2:1083574/1‑140 (MQ=255) gcgcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGcc < 2:8835308/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTATCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 2:4938584/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 1:8551335/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 1:8371683/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 1:7045381/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 1:11211977/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 1:4524138/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGACTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 1:10538917/140‑1 (MQ=255) gatttGTGGATGCCGGATGCGGCGCGAGCGCCTTATCAGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑AAATTTGGCGTTGGTCATCAGTCTCAGGCCgg < 2:9779883/138‑1 (MQ=21) ggATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCAt > 2:7028064/1‑140 (MQ=255) aTGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGtcat > 2:2042699/1‑110 (MQ=255) aTGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATcc > 2:2843699/1‑140 (MQ=255) gcggcgCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCgg < 1:7531874/140‑1 (MQ=255) cggcgCGAGCGCCTTATCCGTCCTACAAAACATCGCTAATTCAAGCGTTTGCAATGCAGTTGTAGGCCTTATAAGCGTTGCGGCTGA‑GTCTATTTGGCGGGGGTCCTCAGTCTCAGTCCGGGTGGGTATTAGCAtgaggg > 2:11030860/1‑135 (MQ=255) cggcgCGAGCGCCTTATCCGTCCTACAAAACATCGCATATTCAATAGATTGCAATGCACTTGTAGGCCTGTTAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCgga < 1:7864309/140‑2 (MQ=255) gcgAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCACTGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGGGGGTAATACCATCCGGCCAtt < 1:2465026/140‑1 (MQ=255) gcgAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGAGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCAtt < 2:3137214/140‑1 (MQ=255) gAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCAtttt > 1:2029853/1‑140 (MQ=255) aGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCgg > 1:6608393/1‑114 (MQ=255) tATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCAATTGTAGGCCTGATAATCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCAATTTTCATTTAAg < 2:1652832/140‑1 (MQ=37) aTCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGGAATACCATCCGGCCATTTTCATTTAAGc < 1:5622626/140‑1 (MQ=255) tCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGTTAATACCATCCGGCCATTTTCATTTAAGcc < 2:7788299/140‑1 (MQ=255) gTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGtcat < 1:4848799/88‑1 (MQ=255) tCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACtt > 1:11585489/1‑140 (MQ=255) ccTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTc > 1:1782460/1‑140 (MQ=255) cTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTcc < 1:619185/140‑1 (MQ=255) aCAAAACATCGCACAGTCAATAGATTGCAATGCACTTGTAGTCCTGATAAGCGTAGCGCATCAGG‑CTATTTGGCGTTTTTCCTCAGTCTCAGGCCGGTTGGGTAATACAATCCGGCCATTTTCATTTAAGCCACTTCCAg < 2:4709877/140‑1 (MQ=37) aCAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAg > 2:50975/1‑140 (MQ=255) cATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCActtc > 1:9514783/1‑140 (MQ=255) cATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCActtc > 1:601510/1‑140 (MQ=255) cGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCttt > 1:9070110/1‑140 (MQ=255) cGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCttt > 2:6358253/1‑140 (MQ=255) cAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTGTCATTTCAGCCACTTCCAGCACTTCTTTTg > 1:3271082/1‑140 (MQ=255) aaTTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTc < 2:6512276/140‑1 (MQ=255) tAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCa < 2:10476092/140‑1 (MQ=255) ttGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGcc < 2:11623462/140‑1 (MQ=255) ttGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGcc < 2:4388258/140‑1 (MQ=255) tagctaTGCACTTGTATTCCTGATAATCTTAGCTCATCATG‑AAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGcc < 2:9589671/135‑1 (MQ=255) tGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGccc > 2:536412/1‑140 (MQ=255) tGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGccc > 1:7727501/1‑140 (MQ=255) tGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGccc > 1:5819601/1‑140 (MQ=255) aaTGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGa < 1:11041324/140‑1 (MQ=255) aaTGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGa < 2:341281/140‑1 (MQ=255) tGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATg > 2:5646628/1‑140 (MQ=255) gCACTTGTAGGCCTGATTAGCGTAGCGCATCAGG‑CAATTTGGCGTTGGTCATCAGTCACAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGc < 2:8994851/140‑1 (MQ=38) cACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGc > 2:7253812/1‑84 (MQ=255) cACTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGGTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATACGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTATTGTCGCTTTCACGCCCTGATgaa > 2:11219288/1‑138 (MQ=38) cTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATc < 1:2319558/140‑1 (MQ=255) cTTGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTGGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCAATTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATc < 1:49624/140‑1 (MQ=255) tGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCaa < 2:3778791/140‑1 (MQ=255) tGTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCaa < 1:5269837/140‑1 (MQ=255) gTAGGCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAAc < 1:2691109/140‑1 (MQ=255) tAGGCCTGCTAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCTTCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCATCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAAca < 2:6760402/140‑1 (MQ=38) ggCCTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAAcatc > 1:7950649/1‑140 (MQ=255) ccTGATAAGCGTAGCGCATCAGG‑CCCTTTGGCGGTTGTCATCCGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTGTGTCGCTTTCACGCCCTGATGCATCAAcatcct > 1:6855536/1‑138 (MQ=38) cTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCAtt > 2:2370846/1‑140 (MQ=255) cTGATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCAtt < 2:8111240/140‑1 (MQ=255) gATAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCACTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTaa > 1:7274825/1‑140 (MQ=255) tttagtgTAGCGAATCATG‑CAATTTTGCTTTTTTATTCATTATCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAAc < 2:4816877/134‑1 (MQ=255) aTAAGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAAc < 1:10863177/140‑1 (MQ=255) aaGCGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGc < 2:1329749/140‑1 (MQ=255) cGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTc > 1:8964437/1‑140 (MQ=255) cGTAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTc > 1:7394371/1‑140 (MQ=255) tAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTCaa > 2:1139386/1‑140 (MQ=255) tAGCGCATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTCaa > 1:3926514/1‑140 (MQ=255) cgcATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTCAAGTa > 1:3138630/1‑140 (MQ=255) cgcATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTCAAGTa > 1:10412738/1‑140 (MQ=255) cgcATCAGG‑CAATTTGGCGGTTGTCCTCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCCCGTCTTTTGTCGCTTTCACGCCCTGATGCAGCAACATCATTAACGCCTCAAGTa > 2:4129266/1‑140 (MQ=255) gcATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTCAAGTAc > 1:6375845/1‑140 (MQ=255) cATCAGG‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTCAAGTAcg < 2:2626688/140‑1 (MQ=255) | TACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCA‑G‑CAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTCAAGTACG > NZ_CP025268/3014720‑3014991 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |