| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,743,290 | +C | intergenic (‑66/‑116) | yiaJ ← / → galK | IclR family transcriptional regulator YiaJ/galactokinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,743,289 | 1 | . | C | 96.9% | 853.1 / 18.7 | 257 | intergenic (‑65/‑117) | yiaJ/galK | IclR family transcriptional regulator YiaJ/galactokinase |
| Reads supporting (aligned to +/- strand): ref base . (3/5); new base C (137/112); total (140/117) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.75e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 270 total aligned reads displayed.
ACTCTGGCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑A‑CAATTGATTTTTATGTCTTTTGAAATTCATCAATCCTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCAGGAGGCAGATCATGAGTCTGAAAGAAAAA > NZ_CP025268/3743150‑3743423 | aCTCTGGCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATa‑a > 1:9703021/1‑140 (MQ=255) tctGGCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATa‑aac > 2:8400120/1‑138 (MQ=255) ggCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑A‑ccaat > 2:1736685/1‑136 (MQ=255) ggCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑A‑ccaat < 2:11195838/140‑5 (MQ=255) ggCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑A‑ccaat > 1:4004272/1‑136 (MQ=255) ggCTTCCGGCTGGACGCTCTTATTCCTGCGCCATCTCGGTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGACCTGATGGTAGCGCACAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑A‑ccaat > 2:7462378/1‑136 (MQ=255) gCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCTGTAGTTCACGATCTCGACAGATAATTTATA‑A‑ccaatt < 1:7584280/140‑6 (MQ=255) tCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTGTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGAt > 2:827458/1‑140 (MQ=255) ccGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGAtt > 2:6450996/1‑140 (MQ=255) ccGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGAGGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGAtt > 1:568970/1‑140 (MQ=255) ggCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCNCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGAtttt > 1:6177818/1‑140 (MQ=255) ggCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGAtttt > 1:5137833/1‑140 (MQ=255) cTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTCGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGCTGTTTa > 1:10050984/1‑140 (MQ=255) tGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTAt < 1:6670785/140‑1 (MQ=255) ggACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATg < 1:4684355/140‑1 (MQ=255) ctTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTg > 1:10175261/1‑140 (MQ=255) ttttCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGaa < 1:3433784/140‑1 (MQ=255) ttgtCCTGCGCCATCTCGTTCTCTCTTTGACCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTACTTCACGATCTCGACAGCTAATTTATA‑ACCAATTGATTTTTATGTCTTTTGaa < 2:10214208/137‑1 (MQ=255) ccTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATtc < 2:5406244/140‑1 (MQ=255) tGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATtcat < 1:1212328/140‑1 (MQ=255) gcgcCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATtcatc > 1:2399674/1‑140 (MQ=255) gcgcCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATtcatc > 1:1820777/1‑140 (MQ=255) cgcCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATtcatca < 2:7920958/140‑1 (MQ=255) cgcCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATtcatca < 1:1472007/140‑1 (MQ=255) gcCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCaa < 2:2190152/140‑1 (MQ=255) gcCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTAATCaa > 2:8124043/1‑140 (MQ=255) ccATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAAt < 2:7293095/140‑1 (MQ=255) cATCTCGTTCTCTTTTTTTCCCATCACTTCTGTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATC < 2:1640485‑M1/140‑1 (MQ=255) tctcGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGaa > 2:7889100/1‑127 (MQ=255) tctcGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCag > 2:8730207‑M1/1‑138 (MQ=255) tctcGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCag > 2:7418377‑M1/1‑138 (MQ=255) ctcGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCaga < 1:2072385‑M1/140‑4 (MQ=255) tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCTTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc < 2:9239452‑M1/140‑9 (MQ=255) tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc < 2:8994504‑M1/140‑9 (MQ=255) tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc < 2:1158105‑M1/140‑9 (MQ=255) tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc < 2:6585348‑M1/140‑9 (MQ=255) tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc < 2:11255675‑M1/140‑9 (MQ=255) tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc < 1:11496753‑M1/140‑9 (MQ=255) tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc < 2:3227213‑M1/140‑9 (MQ=255) tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc < 2:2872119‑M1/140‑9 (MQ=255) tctcTTTTTTGCCCATCACGTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATGTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc < 2:10925999‑M1/140‑9 (MQ=255) tttttttCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgt > 1:5042048‑M1/1‑128 (MQ=255) ttttttCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATGTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAAGCagattgccttgtt > 2:7482766‑M1/1‑127 (MQ=255) tttttCCCATCACTTCTTTCCCCATTTAGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgtta > 1:2704453‑M1/1‑126 (MQ=255) tttCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaa < 2:5292675‑M1/140‑17 (MQ=255) ttCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaa > 2:11457663‑M1/1‑123 (MQ=255) tCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGCTGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaa < 2:11324933‑M1/140‑19 (MQ=255) cATCACTTCTTTCCCCATTTTGTCGCGTCCTGAGGGTATCGCAAAGTGTGCCGTATTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtg < 2:10509425‑M1/140‑22 (MQ=255) aTCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtga > 2:4718388‑M1/1‑118 (MQ=255) aTCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtga > 2:5720972‑M1/1‑118 (MQ=255) aTCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtga > 1:11313779‑M1/1‑118 (MQ=255) aTCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATGTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtga > 1:8966760‑M1/1‑118 (MQ=255) tCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCACTTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgat < 1:2023425‑M1/140‑24 (MQ=255) tCACTTCGTGCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgat < 2:6398673‑M1/140‑24 (MQ=255) tCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatt > 1:8726073‑M1/1‑108 (MQ=255) tCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatt > 2:5111197‑M1/1‑108 (MQ=255) aTTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaa > 1:9049868‑M1/1‑103 (MQ=255) aTTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaa > 2:1362663‑M1/1‑103 (MQ=255) aTTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaa < 1:43196‑M1/140‑38 (MQ=255) tttGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatc < 1:9832350‑M1/140‑40 (MQ=255) ttGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatca > 1:7523768‑M1/1‑100 (MQ=255) gcgTCCTGCTGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTGTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaattgatcgatatatttgacatcaagttt > 2:7030141‑M1/1‑95 (MQ=255) gTCCTGATGGTATCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTGATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcg < 2:2400191‑M1/140‑48 (MQ=255) tCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgc > 1:9545514‑M1/1‑92 (MQ=255) tCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgc > 2:6134276‑M1/1‑92 (MQ=255) aGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaat > 1:7999779‑M1/1‑82 (MQ=255) aGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaat > 2:2419863‑M1/1‑82 (MQ=255) aGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaat > 2:3609317‑M1/1‑82 (MQ=255) gcAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaatttt > 2:9497217‑M1/1‑79 (MQ=255) cAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaatttta < 1:5990606‑M1/140‑63 (MQ=255) cAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaatttta < 1:9186720‑M1/140‑63 (MQ=255) aGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagc > 2:4618682‑M1/1‑75 (MQ=255) gtgtGCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagcc > 1:10553340‑M1/1‑74 (MQ=255) tgtgCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcga < 2:7798981‑M1/99‑27 (MQ=255) tgCCGTAGTTCACGATCTCGACAGATAATTTATACC‑CAATTGATTTTTATGTCGTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaa > 2:1217387‑M1/1‑71 (MQ=255) tgCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaa > 1:374362‑M1/1‑71 (MQ=255) tgCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaa > 1:675876‑M1/1‑71 (MQ=255) tgCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaa > 1:9540448‑M1/1‑71 (MQ=255) tgCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTAATCAATAagattgcctttttaaaaattgatcgatatattttaattcaagtttcgaatattgaaattttaagccata > 1:6565064‑M1/1‑71 (MQ=255) gCCGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaa < 2:3789516‑M1/140‑71 (MQ=255) ccGTAGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaa > 1:1595249‑M1/1‑69 (MQ=255) aGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTCTGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcg < 2:10722416‑M1/140‑76 (MQ=255) aGTTCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcg < 2:6902735‑M1/140‑76 (MQ=255) ttCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgat > 1:9340502‑M1/1‑63 (MQ=255) ttCACGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgacttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagacaaaaaagcgat > 2:7572088‑M1/1‑63 (MQ=255) cGATCTCGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaa > 1:7027064‑M1/1‑59 (MQ=255) tctcGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaa > 1:11002408‑M1/1‑56 (MQ=255) tctcGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaa > 1:7795993‑M1/1‑56 (MQ=255) tctcGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCANCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaa > 1:10775193‑M1/1‑56 (MQ=255) tcGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaac > 1:2441606‑M1/1‑54 (MQ=255) tcGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaac > 2:10828262‑M1/1‑54 (MQ=255) tcGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaac > 2:2777937‑M1/1‑54 (MQ=255) cGACAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaaca > 2:5792129‑M1/1‑53 (MQ=255) cAGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaacaagg < 1:6666058‑M1/140‑91 (MQ=255) aGATACTTTATA‑ACCACTTGATTTGTAGGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgagatcttggaaatcaagtttcgcatattgaaattttaagccaacaaagcgatcaaaaaaacaaggc < 2:57294‑M1/140‑92 (MQ=255) aGATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaacaagga < 2:9396967‑M1/140‑92 (MQ=255) gATAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaacaaggaa > 1:8152001‑M1/1‑48 (MQ=255) aTAATTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaacaaggaag > 2:1728265‑M1/1‑47 (MQ=255) aaTTTATA‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaacaaggaagcc < 1:3622939‑M1/140‑96 (MQ=255) tata‑ACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaacaaggaagcctggg < 1:3000490‑M1/140‑100 (MQ=255) | ACTCTGGCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATA‑A‑CAATTGATTTTTATGTCTTTTGAAATTCATCAATCCTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCAGGAGGCAGATCATGAGTCTGAAAGAAAAA > NZ_CP025268/3743150‑3743423 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |