| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP025268 | = 1402056 | NA (NA) | 747 (1.090) | 142/274 | 0.3 | 98.3% | intergenic (+146/‑127) | CXP41_RS07410/ynaJ | IS5‑like element IS5 family transposase/DUF2534 family protein |
| ? | NZ_CP025268 | 1913625 = | 13 (0.020) | intergenic (‑46/‑113) | mgrB/yobH | PhoP/PhoQ regulator MgrB/YobH family protein | |||||
Only 100 of 1481 total aligned reads displayed.
CATCCTGATCGCACATCATGTTGAATACCTGCGCCCAAAGCAGCAAGCAAGCCAACACCACGACAACCAGAACGACCCATCGAAACTTTTTCACTCCAATCTCCGTTTCACCTACCTTATGTCATTAAACTAGCATGCGTTAGTTAAACAGCGCCTAACTATGTCGATATTCGTGCTTTTTCGGAATGAGTCGCTTGCTTCAGCGCATATTGCCGCTACGATTAAGCGAACATAAAAAGAGAAGAGGTTGTAATGCGATTCATCATTCGCACAGTTATG > NZ_CP025268/1913486‑1913764 | ggataccgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcct < 1:3078508‑M2/1‑1 (MQ=255)ggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcct > 1:8354334‑M2/140‑140 (MQ=255)ggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcct < 2:3527718‑M2/1‑1 (MQ=255)cATCCTGATCGCACATCATGTTGAATACCTGCGCCCAAAGCAGCAAGCAAGCCAACACCACGACAACCAGAACGACCCATCGAAACTTTTTCACTCCAATCTCCGTTTCACCTACCTTATGTCATTAAACTAGCATGCgt < 1:4243587/140‑1 (MQ=255) gATCGCACATCATGTTGAATACCTGCGCCCAAAGCAGCAAGCAAGCCAACACCACGACAACCAGAACGACCCATCGAAACTTTTTCACTCCAATCTCCGTTTCACCTACCTTATGTCATTAAACTAGCATGCGTTAGgga > 1:8892949‑M1/1‑137 (MQ=255) cgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccttatatt < 1:11013425‑M2/7‑5 (MQ=255) tCGCACATCATGTTGAATACCTGCGCCCAAAGCAGCAAGCAAGCCAACACCACGACAACCAGAACGACCCATCGAAACTTTTTCACTCCAATCTCCGTTTCACCTACCTTATGTCATTAAACTAGCATGCGTTAGggaag > 2:7124662‑M1/1‑135 (MQ=255) ccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTaaa < 2:10839810‑M2/9‑1 (MQ=255) cttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatatccccgcttattcgcaccttccTTAGTTAAAc > 2:6487276‑M2/131‑140 (MQ=255) catcatGTTGAATACCTGCGCCCAAAGCAGCAAGCACGCCAACACCACGACAACCAGAACGACCCATCGAAACTGTTTCACTCCAATCTCCGTTTCACCTCCCTGAGGTCCTTAAACTAGCATGCGTTAGggaaggtgcg > 2:8824118‑M1/1‑130 (MQ=255) aatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTAAACAgcg < 1:3979796‑M2/14‑1 (MQ=255) aatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTAAACAgcg < 1:6492940‑M2/14‑1 (MQ=255) aatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTAAACAgcg < 1:6924062‑M2/14‑1 (MQ=255) tcatGTTGAATACCTGCGCCCAAAGCAGCAAGCAAGCCAACACCACGACAACCAGAACGACCCATCGAAACTTTTTCACTCCAATCTCCGTTTCACCTACCTTATGTCATTAAACTAGCATGCGTTAGggaaggtgcgaa > 1:1147739‑M1/1‑128 (MQ=255) ggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTAAACAGCGCCt < 2:2619918‑M2/17‑1 (MQ=255) catGTTGAATACCTGCGCCCAAAGCAGCAAGCAAGCCAACACCACGACAACCAGAACGACCCATCGAAACTTTTTCACTCCAATCTCCGTTTCACCTACCTTATGTCATTAAACTAGCATGCGTTAGggaaggtgcgaac < 2:1433555‑M1/140‑14 (MQ=255) atGTTGAATACCTGCGCCCAAAGCAGCAAGCAAGCCAACACCACGACAACCAGAACGACCCATCGAAACTTTTTCACTCCAATCTCCGTTTCACCTACCTTATGTCATTAAACTAGCATGCGTTAGggaaggtgcgaaca > 1:6260862‑M1/1‑126 (MQ=255) cgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTAAACAGCGCCTaa > 1:1737981‑M2/122‑140 (MQ=255) gTTGAATACCTGCGCCCAAAGCAGCAAGCAAGCCAACACCACGACAACCAGAACGACCCATCGAAACTTTTTCACTCCAATCTCCGTTTCACCTACCTTATGTCATTAAACTAGCATGCGTTAGggaaggtgcgaacaag < 2:2226417‑M1/140‑17 (MQ=255) gTTGAATACCTGCGCCCAAAGCAGCAAGCAAGCCAACACCACGACAACCAGAACGACCCATCGAAACTTTTTCACTCCAATCTCCGTTTCACCTACCTTATGTCATTAAACTAGCATGCGTTAGggaaggtgcgaacaag < 1:8797696‑M1/140‑17 (MQ=255) cagacacggtctaaataggctgattcaaggcattgacgggagaaacaatcggctcaaacatgaagacatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTAAACCGCGCCTACCt < 2:2392144‑M2/21‑1 (MQ=255) gAATACCTGCGCCCAAAGCAGCAAGCAAGCCAACACCACGACAACCAGAACGACCCATCGAAACTTTTTCACTCCAATCTCCGTTTCACCTACCTTATGTCATTAAACTAGCATGCGTTAGggaaggtgcgaacaagtcc < 1:2591201‑M1/140‑20 (MQ=255) gAATACCTGCGCCCAAAGCAGCAAGCAAGCCAACACCACGACAACCAGAACGACCCATCGAAACTTTTTCACTCCAATCTCCGTTTCACCTACCTTATGTCATTAAACTAGCATGCGTTAGggaaggtgcgaacaagtcc < 1:1052074‑M1/140‑20 (MQ=255) aaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTAAACAGCGCCTAACTATg > 2:963757‑M2/117‑140 (MQ=255) gtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTAAACAGCGCCTAACTATGTCGat > 1:9459434‑M2/112‑140 (MQ=255) gcgcCCAAAGCAGCAAGCAAGCCAACACCACGACAACCAGAACGACCCATCGAAACTTTTTCACTCCAATCTCCGTTTCACCTACCTTATGTCATTAAACTAGCATGCGTTAGggaaggtgcgaacaagtccctgatatg > 1:6790338‑M1/1‑113 (MQ=255) gcgcCCAAAGCAGCAAGCAAGCCAACACCACGACAACCAGAACGACCCATCGAAACTTTTTCACTCCAATCTCCGTTTCACCTACCTTATGTCATTAAACTAGCATGCGTTAGggaaggtgcgaacaagtccctgatatg > 1:1253205‑M1/1‑113 (MQ=255) gcgcCCAAAGCAGCAAGCAAGCCAACACCACGACAACCAGAACGACCCATCGAAACTTTTTCACTCCAATCTCCGTTTCACCTACCTTATGTCATTAAACTAGCATGCGTTAGggaaggtgcgaacaagtccctgatatg > 2:936927‑M1/1‑113 (MQ=255) aaaGCAGCAAGCAAGCCAACACCACGACAACCAGAACGACCCATCGAAACTTTTTCACTCCAATCTCCGTTTCACCTACCTTATGTCATTAAACTAGCATGCGTTAGggaaggtgcgaacaagtccctgatatgagatca < 1:1989761‑M1/140‑34 (MQ=255) ggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTAAACAGCGCCTAACTATGTCGATATTCGTGCt > 1:10861766‑M2/103‑140 (MQ=255) gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgtaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTAAACAGCGCCTAACTATGTCGATATTCGTGCtt > 1:10692203‑M2/102‑140 (MQ=255) gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTAAACAGCGCCTAACTATGTCGATATTCGTGCtt > 1:2830891‑M2/102‑140 (MQ=255) gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTAAACAGCGCCTAACTATGTCGATATTCGTGCtt > 2:10468220‑M2/102‑140 (MQ=255) gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTAAACAGCGCCTAACTATGTCGATATTCGTGCtt > 1:1502356‑M2/102‑140 (MQ=255) gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTAAACAGCGCCTAACTATGTCGATATTCGTGCtt > 1:5221473‑M2/102‑140 (MQ=255) gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTAAACAGCGCCTAACTATGTCGATATTCGTGCtt > 1:2374971‑M2/102‑140 (MQ=255) ctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTAAACAGCGCCTAACTATGTCGATATTCGTGCttt > 1:7845060‑M2/101‑140 (MQ=255) agcaagcaAGCCAACACCACGACAACCAGAACGACCCATCGAAACTTTTTCACTCCAATCTCCGTTTCACCTACCTTATGTCATTAAACTAGCATGCGTTAGggaaggtgcgaacaagtccctgatatgagatcatgttt < 2:11612983‑M1/140‑39 (MQ=255) agcaagcaAGCCAACACCACGACAACCAGAACGACCCATCGAAACTTTTTCACTCCAATCTCCGTTTCACCTACCTTATGTCATTAAACTAGCATGCGTTAGggaaggtgcgaacaagtccctgatatgagatcatgttt > 2:865234‑M1/1‑102 (MQ=255) gcaagcaaGCCAACACCACGACAACCAGAACGACCCATCGAAACTTTTTCACTCCAATCTCCGTTTCACCTACCTTATGTCATTAAACTAGCATGCGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttg < 1:610345‑M1/140‑40 (MQ=255) attcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccGTAGTTAAACAGCGCCTAACTATGTCGATATTCGTgcttttgc > 2:10627749‑M2/98‑138 (MQ=255) ttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTAAACAGCGCCTAACTATGTCGATATTCGTGCTTTTTCg > 1:7714644‑M2/97‑140 (MQ=255) caagcCAACACCACGACAACCAGAACGACCCATCGAAAATTTTTCACTCCAATCTCCGTTTCACCTACCTTATGTCATTAAACTAGCATGCGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatc < 2:4516018‑M1/140‑45 (MQ=255) gcCAACACCACGACAACCAGAACGACCCATCGAAACTTTTTCACTCCAATCTCCGTTTCACCTACCTTATGTCATTAAACTAGCATGCGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgg < 1:908011‑M1/140‑48 (MQ=255) catttacgggagaaaaaatcggctcaaacatgaagaaatgaaaagactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTAAAACAGCGCCTAACTATGTCGATATTCGTGCTTTTTCGGAATGAg < 2:1812953‑M2/51‑1 (MQ=255) ttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTAAACAGCGCCTAACTATGTCGATATTCGTGCTTTTTCGGAATGAGTCg > 1:6648411‑M2/87‑140 (MQ=255) cGACAACCAGAACGACCCATCGAAACTTTTTCACTCCAATCTCCGTTTCACCTACCTTATGTCATTAAACTAGCATGCGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaa > 1:10138207‑M1/1‑83 (MQ=255) cGACAACCAGAACGACCCATCGAAACTTTTTCACTCCAATCTCCGTTTCACCTACCTTATGTCATTAAACTAGCATGCGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaa > 1:214982‑M1/1‑83 (MQ=255) cGACAACCAGAACGACCCATCGAAACTTTTTCACTCCAATCTCCGTTTCACCTACCTTATGTCATTAAACTAGCATGCGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaa > 1:10353748‑M1/1‑83 (MQ=255) cGACAACCAGAACGACCCATCGAAACTTTTTCACTCCAATCTCCGTTTCACCTACCTTATGTCATTAAACTAGCATGCGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaa > 1:8598996‑M1/1‑83 (MQ=255) aaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTAAACAGCGCCTAACTATGTCGATATTCGTGCTTTTTCGGAATGAGTCGCTTGCTTCa > 1:361445‑M2/78‑140 (MQ=255) aCCAGAACGACCCCTCGAAACTATGTCACTCCAATCTCCGTTTCACCTACCTTATGTCATTAAACTAGCATGCGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg < 1:5963709‑M1/140‑63 (MQ=255) aCCAGAACGACCCATCGAAACTTTTTCACTCCAATCTCCGTTTCACCTACCTTATGTCATTAAACTAGCATGCGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg > 1:3265222‑M1/1‑78 (MQ=255) aCCAGAACGACCCATCGAAACTTTTTCACTCCAATCTCCGTTTCACCTACCTTATGTCATTAAACTAGCATGCGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg < 1:5383934‑M1/140‑63 (MQ=255) ccAGAACGACCCATCGAAACTTTTTCACTCAAATCTCCGTTTCACCTACCTTATGTCATTAAACTAGCATGCGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggt < 2:6098593‑M1/140‑64 (MQ=255) ctcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatgtccccgcttattcgcaccttccTTAGTTAAACAGCGCCTAACTATGTCGATATTCGTGCTTTTTCGGAATGAGTCGCTTGCTTCAGCGCa < 2:6691570‑M2/68‑1 (MQ=255) atcggctcaaacatgaagaaatgaaatgcctgagtcagccgagaagaatttccccgctgattcgcaccttccTTAGTTAACCAGCGCCTAACTATGTCGATATTCGTGCTTTTTCGGAATGAGTCGCTTGCTTCAGCGCa < 2:3270101‑M2/68‑1 (MQ=255) atcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTAAACAGCGCCTAACTATGTCGATATTCGTGCTTTTTCGGAATGAGTCGCTTGCTTCAGCGCa < 1:3468264‑M2/68‑1 (MQ=255) aaCGACCCATCGAAACTTTTTCACTCCAATCTCCGTTTCACCTACCTTATGTCATTAAACTAGCATGCGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcat > 1:9950271‑M1/1‑73 (MQ=255) gcacaaacctgaagaaatgaactgcctgagtcagccgagaagaattgccccgcttattcgcaccttccTTAGTTAAACAGCGCCTAACTATGTCGATATTCGTGCTTTTTCGGAATGAGTCGCTTGCTTCAGCGCATAtt < 2:8946001‑M2/72‑1 (MQ=255) cccATCGAAACTTTTTCACTCCAATCTCCGTTTCACCTACCTTATGTCATTAAACTAGCATGCGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga > 1:5661455‑M1/1‑68 (MQ=255) aaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTAAACAGCGCCTAACTATGTCGATATTCGTGCTTTTTCGGAATGAGTCGCTTGCTTCAGCGCATATTGCCg < 1:4788976‑M2/76‑1 (MQ=255) aaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTAAACAGCGCCTAACTATGTCGATATTCGTGCTTTTTCGGAATGAGTCGCTTGCTTCAGCGCATAGTGCCg < 2:2920571‑M2/76‑1 (MQ=255) catgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTAAACAGCGCCTAACTATGTCGATATTCGTGCTTTTTCGGAATGAGTCGCTTGCTTCAGCGCATATTGCCGCTa < 1:9218155‑M2/79‑1 (MQ=255) aTCGAAACTTTTTCACTCCAATCTCCGTTTCACCTACCTTATGTCATTAAACTAGCATGCGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc < 1:810985‑M1/140‑76 (MQ=255) atttcACTCCAATCTCCGTTTCACCTACCTTAGTTCATTAAACTAGCATGCGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactta < 2:8431827‑M1/139‑85 (MQ=255) tgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTAAACAGCGCCTAACTATGTCGATATTCGTGCTTTTTCGGAATGAGTCGCTTGCTTCAGCGCATATTGCCGCTACGATTAAGCGAACAt < 2:2020825‑M2/94‑1 (MQ=255) actgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTAAACAGCGCCTAACTATGTCGATATTCGTGCTTTTTCGGAATGAGTCGCTTGCTTCAGCGCATATTGCCGCTACGATTAAGCGAACATaa > 2:10154530‑M2/45‑140 (MQ=255) cAATCTCCGTTTCACCTACCTTATGTCATTAAACTAGCATGCGTTAGggaaggtgcgaacaagtcccggatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccg < 1:3827879‑M1/140‑94 (MQ=255) tgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTAAACAGCGCCTAACTATGTCGATATTCGTGCTTTTTCGGAATGAGTCGCTTGCTTCAGCGCATATTGCCGCTACGATTAAGCGAACATaaaa < 2:5811854‑M2/98‑1 (MQ=255) tgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTAAACAGCGCCTAACTATGTCGATATTCGTGCTTTTTCGGAATGAGTCGCTTGCTTCAGCGCATATTGCCGCTACGATTAAGCGAACATaaaa < 2:407021‑M2/98‑1 (MQ=255) agtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTAAACAGCGCCTAACTATGTCGATATTCGTGCTTTTTCGGAATGAGTCGCTTGCTTCAGCGCATATTGCCGCTACGATTAAGCGAACATAAAaag < 2:9860039‑M2/100‑1 (MQ=255) gtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTAAACAGCGCCTAACTATGTCGATATTCGTGCTTTTTCGGAATGAGTCGCTTGCTTCAGCGCATATTGCCGCTACGATTAAGCGAACATAAAaaga > 1:10000682‑M2/40‑140 (MQ=255) agccgagaagaatttccccgcttattcgcaccttccTTAGTTAAACAGCGCCTAACTATGTCGATATTCGTGCTTTTTCGGAATGAGTCGCTTTCTTCAGCGCAAATTTCCGCTACGATTAAGCGAACATAAAaatagaa > 1:45371‑M2/37‑140 (MQ=255) gccgagaagaatttccccgcttattcgcaccttccTTAGTTAAACAGCGCCTAACTATGTCGATATTCGTGCTTTTTCGGAATGAGTCGCTTGCTTCAGCGCATATTGCCGCTACGATTAAGCGAACATAAAaagagaag < 2:7763594‑M2/105‑1 (MQ=255) ccgagaagaatttccccgcttattcgcaccttccTTAGTTAAACAGCGCCTAACTATGTCGATATTCGTGCTTTTTCGGAATGAGTCGCTTGCTTCAGCGCATATTGCCGCTACGATTAAGCGAACATAAaaagagaagt > 1:4401469‑M2/35‑139 (MQ=255) ccgagaagaatttccccgcttattcgcaccttccTTAGTTAAACAGCGCCTAACTATGTCGATATTAGTGCTTTTTCGGAATGAGTCGCTTGCTTCAGAGCATATTTCCGCTACGATTAAGCGAACATAAAaagagaaga > 2:8221473‑M2/35‑140 (MQ=255) cACCTACCTTATGTCATTAAACTAGCATGCGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattca < 2:3640167‑M1/140‑106 (MQ=255) acctTATGTCATTAAACTAGCATGCGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagt > 1:5033599‑M1/1‑30 (MQ=255) tttccccgcttattcgcaccttccTTAGTTAAACAGCGCCTAACTATGTCGATATTCGTGCTTTTTCGGAATGAGTCGCTTGCTTCAGCGCATATTGCCGCTACGATTAAGCGAACATAAAAAGAGAAGAGGTTGTAATg > 2:3842070‑M2/25‑140 (MQ=255) ttATGTCATTAAACTAGCATGCGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaag < 1:11156103‑M1/140‑114 (MQ=255) ttAAACTAGCATGCGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtca > 1:5788394‑M1/1‑19 (MQ=255) ttAAACTAGCATGCGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtca > 2:6916900‑M1/1‑19 (MQ=255) ttAAACTAGCATGCGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtca < 2:1127389‑M1/140‑122 (MQ=255) tAAACTAGCATGCGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcag > 2:7539612‑M1/1‑18 (MQ=255) aaCTAGCATGCGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagac < 2:4719289‑M1/140‑125 (MQ=255) caccttccTTAGTTAAACAGCGCCTAACTATGTCGATATTCGTGCTTTTTCGGACTGAGTCGCTTGCTTCAGCGCATATTGCCGCTACGATTAAGCGAACATAAAAAGAGAAGAGGTTGTAATGCGATTCATCATTCGca < 1:9750795‑M2/132‑1 (MQ=255) caccttccTTAGTTAAACAGCGCCTAACTATGTCGATATTCGTGCTTTTTCGGAATGAGTCGCTTGCTTCAGCGCATATTGCCGCTACGATTAAGCGAACATAAAAAGAGAAGAGGTTGTAATGCGATTCATCATTCGca < 1:712950‑M2/132‑1 (MQ=255) caccttccTTAGTTAAACAGCGCCTAACTATGTCGATATTCGTGCTTTTTCGGAATGAGTCGCTTGCTTCAGCGCATATTGCCGCTACGATTAAGCGAACATAAAAAGAGAAGAGGTTGTAATGCGATTCATCATTCGca < 2:7986506‑M2/132‑1 (MQ=255) caccttccTTAGTTAAACAGCGCCTAACTATGTCGATATTCGTGCTTTTTCGGAATGAGTCGCTTGCTTCAGCGCATATTGCCGCTACGATTAAGCGAACATAAAAAGAGAAGAGGTTGTAATGCGATTCATCATTCGca < 1:7471911‑M2/132‑1 (MQ=255) caccttccTTAGTTAAACAGCGCCTAACTATGTCGATATTCGTGCTTTTTCGGAATGAGTCGCTTGCTTCAGCGCATATTGCCGCTACGATTAAGCGAACATAAAAAGAGAAGAGGTTGTAATGCGATTCATCATTCGca < 2:5501506‑M2/132‑1 (MQ=255) caccttccTTAGTTAAACAGCGCCTAACTATGTCGATATTCGTGCTTTTTCGGAATGAGTCGCTTGCTTCAGCGCATATTGCCGCTACGATTAAGCGAACATAAAAAGAGAAGAGGTTGTAATGCGATTCATCATTCGca < 2:4315204‑M2/132‑1 (MQ=255) gCATGCGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaa > 2:5135606‑M1/1‑11 (MQ=255) gCATGCGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg > 2:531374‑M1/1‑11 (MQ=255) cATGCGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaa > 2:7349245‑M1/1‑10 (MQ=255) tGCGTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaag > 2:1626123‑M1/1‑8 (MQ=255) tccTTAGTTAAACAGCGCCTAACTATGTCGATATTCGTGCTTTTTCGGAATGAGTCGCTTGCTTCAGCGCATATTGCCGCTACGATTAAGCGAACATAAAAAGAGAAGAGGTTGTAATGCGATTCATCATTCGCACAGtt < 2:11122563‑M2/137‑1 (MQ=255) gTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagaga < 2:9119552‑M1/140‑136 (MQ=255) gTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc > 2:6266260‑M1/1‑5 (MQ=255) cTTAGTTAAACAGCGCCTAACTATGTCGATATTCGTGCTTTTTCGGAATGAGTCGCTTGCTTCAGCGCATATTGCCGCTACGATTAAGCGAACATAAAAAGAGAAGAGGTTGTAATGCGATTCATCATTCGCACAGTTAt < 2:4834143‑M2/139‑1 (MQ=255) | CATCCTGATCGCACATCATGTTGAATACCTGCGCCCAAAGCAGCAAGCAAGCCAACACCACGACAACCAGAACGACCCATCGAAACTTTTTCACTCCAATCTCCGTTTCACCTACCTTATGTCATTAAACTAGCATGCGTTAGTTAAACAGCGCCTAACTATGTCGATATTCGTGCTTTTTCGGAATGAGTCGCTTGCTTCAGCGCATATTGCCGCTACGATTAAGCGAACATAAAAAGAGAAGAGGTTGTAATGCGATTCATCATTCGCACAGTTATG > NZ_CP025268/1913486‑1913764 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |