Predicted mutation
evidence seq id position mutation annotation gene description
JC NZ_CP025268 1,774,293 (G)10→7 coding (406‑408/1116 nt) ydiK → AI‑2E family transporter YdiK

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP025268 1774289 =5 (0.010)885 (1.370) 154/260 0.1 99.5% coding (402/1116 nt) ydiK AI‑2E family transporter YdiK
?NZ_CP025268 = 1774285 4 (0.010)coding (398/1116 nt) ydiK AI‑2E family transporter YdiK

Only 100 of 942 total aligned reads displayed.

CAGTATCGTCGACGGCAGCGGCCCGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATGGGGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTTCTCTTCAGTGCCCTGCTG  >  NZ_CP025268/1774148‑1774421
                                                                                                                                         |                                                                                                                                        
cAGTATCGTCGACGGCAGCGGCCCGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgg                                                                                                                                        <  1:2896650‑M2/140‑3 (MQ=255)
 aGTATCGTCGACGGCAGCGGCCCGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATggg                                                                                                                                       >  2:1818346‑M2/1‑137 (MQ=255)
 aGTATCGTCGACGGCAGCGGCCCGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATggg                                                                                                                                       >  1:8767819‑M2/1‑137 (MQ=255)
     tcgtcgACGGCAGGGGCCCGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATggggggg                                                                                                                                   <  1:9972103‑M2/140‑8 (MQ=255)
     tcgtcgACGGCAGCGGCCCGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATggggggg                                                                                                                                   <  2:3483089‑M2/140‑8 (MQ=255)
     tcgtcgACGGCAGCGGCCCGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATggggggg                                                                                                                                   <  1:2090846‑M2/140‑8 (MQ=255)
     tcgtcgACGGCAGCGGCCCGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATggggggg                                                                                                                                   <  1:2682344‑M2/140‑8 (MQ=255)
        tcgACGGCAGCGGCCCGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacg                                                                                                                                <  2:9495257‑M2/140‑11 (MQ=255)
        tcgACGGCAGCGGCCCGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacg                                                                                                                                <  2:2023106‑M2/140‑11 (MQ=255)
           aCGGCAGCGGCCCGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCCCAACTTGCTGGATCTgggggggacggcg                                                                                                                             <  2:8325352‑M2/140‑14 (MQ=255)
           aCGGCAGCGGCCCGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcg                                                                                                                             >  1:9807263‑M2/1‑127 (MQ=255)
             ggCAGCGGCCCGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgat                                                                                                                           >  2:11524531‑M2/1‑125 (MQ=255)
             ggCAGCGGCCCGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgat                                                                                                                           >  1:3491788‑M2/1‑125 (MQ=255)
             ggCAGCGGCCCGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgat                                                                                                                           >  1:7997330‑M2/1‑125 (MQ=255)
               cAGCGGCCCTCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGTCTGGCACAAATTGCTGGATATgggggggacggcgatca                                                                                                                         >  2:8767841‑M2/1‑123 (MQ=255)
                  cGGCCCGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGTCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatgg                                                                                                                      <  2:1237017‑M2/140‑21 (MQ=255)
                    gCCCGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcg                                                                                                                    >  2:3633207‑M2/1‑118 (MQ=255)
                       cGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaa                                                                                                                 <  2:10839813‑M2/140‑26 (MQ=255)
                          tAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtc                                                                                                              >  1:7503121‑M2/1‑112 (MQ=255)
                          tAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtc                                                                                                              >  1:3351705‑M2/1‑112 (MQ=255)
                          tAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtc                                                                                                              >  1:5198177‑M2/1‑112 (MQ=255)
                          tAATTAAAGCCATGTCCAGCGGTGACATGACGTGACCCGATCTGTCGTGGCTTAATACCATTCCTGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggtgacggcgatcatggcgaaagtc                                                                                                              >  1:625196‑M2/1‑112 (MQ=255)
                           aaTTAAAGCCATTTCCAGCGGTGACATGTCGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtcc                                                                                                             >  2:3119183‑M2/1‑111 (MQ=255)
                            aTTAAAGCCATTTCCCGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccg                                                                                                            >  2:8644546‑M2/1‑110 (MQ=255)
                            aTTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccg                                                                                                            >  1:7213234‑M2/1‑110 (MQ=255)
                            aTTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccg                                                                                                            >  1:10196878‑M2/1‑110 (MQ=255)
                            aTTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccg                                                                                                            >  1:10500309‑M2/1‑110 (MQ=255)
                                   ccATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATCTgggggggacggcgatcatggcgaaagtccgcccttat                                                                                                     <  2:7258970‑M2/140‑38 (MQ=255)
                                       ttCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattg                                                                                                 >  1:4151490‑M2/1‑99 (MQ=255)
                                         ccAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggc                                                                                               >  1:10003698‑M2/1‑97 (MQ=255)
                                           aGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcac                                                                                             >  2:10461303‑M2/1‑95 (MQ=255)
                                           aGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcac                                                                                             >  2:2822694‑M2/1‑95 (MQ=255)
                                           aGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcac                                                                                             >  1:8968700‑M2/1‑95 (MQ=255)
                                           aGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcac                                                                                             >  2:5003451‑M2/1‑95 (MQ=255)
                                             cGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggagggcgatcatggcgaaagtccgcccttatattggcacca                                                                                           <  1:3055612‑M2/140‑48 (MQ=255)
                                              ggTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccac                                                                                          >  2:9283257‑M2/1‑92 (MQ=255)
                                                tGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccacca                                                                                        <  1:9394262‑M2/140‑51 (MQ=255)
                                                  aCATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATCTgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccacc                                                                                      <  2:4617869‑M2/140‑53 (MQ=255)
                                                  aCATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccacc                                                                                      <  2:4288410‑M2/140‑53 (MQ=255)
                                                       aCGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctg                                                                                 >  1:2496875‑M2/1‑83 (MQ=255)
                                                       aCGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctg                                                                                 >  1:11575843‑M2/1‑83 (MQ=255)
                                                          ttACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggtt                                                                              <  2:5911292‑M2/140‑61 (MQ=255)
                                                          ttACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctgggt                                                                              <  2:5823356‑M2/140‑61 (MQ=255)
                                                                  tCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggc                                                                      <  1:10651378‑M2/140‑69 (MQ=255)
                                                                  tCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCGGGAGCTgggggggacggcgatcatggcgcaagtccgcccgtctatgggcaccaccaccaccgggtgcgttgggc                                                                      <  2:10672659‑M2/140‑69 (MQ=255)
                                                                    tGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcag                                                                    <  1:9253765‑M2/140‑71 (MQ=255)
                                                                     ggCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcagg                                                                   >  2:7867466‑M2/1‑69 (MQ=255)
                                                                     ggCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcagg                                                                   >  2:5574948‑M2/1‑69 (MQ=255)
                                                                       cGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcg                                                                 <  2:2568040‑M2/140‑74 (MQ=255)
                                                                       cGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcg                                                                 <  1:11422406‑M2/140‑74 (MQ=255)
                                                                        gTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTAGGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcgg                                                                >  1:605540‑M2/1‑66 (MQ=255)
                                                                           gCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatccgggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgc                                                             >  2:1469334‑M2/1‑63 (MQ=255)
                                                                           gCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgc                                                             <  1:1591190‑M2/140‑78 (MQ=255)
                                                                           gCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgc                                                             <  1:10946307‑M2/140‑78 (MQ=255)
                                                                            cTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgca                                                            <  2:5218378‑M2/140‑79 (MQ=255)
                                                                                aTACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatc                                                        <  1:8107057‑M2/140‑83 (MQ=255)
                                                                                  aCCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgg                                                      >  1:6999775‑M2/1‑56 (MQ=255)
                                                                                  aCCATTCCGGTGAGTGGCGCGAAGCTGTCTGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgg                                                      >  1:6436177‑M2/1‑56 (MQ=255)
                                                                                     aTTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcg                                                   <  2:7372856‑M2/140‑88 (MQ=255)
                                                                                     aTTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcg                                                   <  1:9618474‑M2/140‑88 (MQ=255)
                                                                                     aTTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcg                                                   >  1:1454813‑M2/1‑53 (MQ=255)
                                                                                      ttCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgc                                                  <  2:6849305‑M2/140‑89 (MQ=255)
                                                                                      ttCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgc                                                  <  1:4016108‑M2/140‑89 (MQ=255)
                                                                                      ttCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgc                                                  <  1:8536892‑M2/140‑89 (MQ=255)
                                                                                      ttCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgc                                                  <  1:4698077‑M2/140‑89 (MQ=255)
                                                                                      ttCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgc                                                  <  1:8348716‑M2/140‑89 (MQ=255)
                                                                                      ttCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgc                                                  <  1:483833‑M2/140‑89 (MQ=255)
                                                                                      ttCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgc                                                  <  2:7600325‑M2/140‑89 (MQ=255)
                                                                                      ttCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaacacctggttcgttgggcaggcggcgcatatcgggcgc                                                  <  2:3909437‑M2/140‑89 (MQ=255)
                                                                                       tCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgct                                                 >  1:5853952‑M2/1‑51 (MQ=255)
                                                                                         cGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgcttt                                               >  2:4128890‑M2/1‑49 (MQ=255)
                                                                                           gTGATTGGCGCGAAGCTGTATGCAGGCTGGCACATCTTGCTGGATTTgggggggacggcgatcatggcgaaagtccgcccttagattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttat                                             >  2:11202877‑M2/1‑47 (MQ=255)
                                                                                           gTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttat                                             <  2:9072933‑M2/140‑94 (MQ=255)
                                                                                           gTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttat                                             <  1:10784835‑M2/140‑94 (MQ=255)
                                                                                           gTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttat                                             <  2:6620839‑M2/140‑94 (MQ=255)
                                                                                              aTTGGCGCGAAGCTGTATGCAGGCTGGCACCACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggt                                          <  2:6412756‑M2/140‑97 (MQ=255)
                                                                                              aTTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggt                                          >  2:8107057‑M2/1‑44 (MQ=255)
                                                                                                 ggCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcctatcgggcgctttatggtgca                                       >  2:7086207‑M2/1‑41 (MQ=255)
                                                                                                   cgcgAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcatt                                     <  1:1947329‑M2/140‑102 (MQ=255)
                                                                                                        aGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattg                                    <  2:6192212‑M2/136‑103 (MQ=255)
                                                                                                          cTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgct                              >  1:2298113‑M2/1‑32 (MQ=255)
                                                                                                            gTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctga                            >  1:1665004‑M2/1‑30 (MQ=255)
                                                                                                            gTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctga                            >  1:131733‑M2/1‑30 (MQ=255)
                                                                                                            gTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctga                            >  1:8248298‑M2/1‑30 (MQ=255)
                                                                                                                 cAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctgatgctt                       >  1:4426135‑M2/1‑25 (MQ=255)
                                                                                                                  aGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctgatgcttc                      >  2:974500‑M2/1‑24 (MQ=255)
                                                                                                                  aGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctgatgcttc                      <  1:5502176‑M2/140‑117 (MQ=255)
                                                                                                                  aGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctgatgcttc                      >  2:11038849‑M2/1‑24 (MQ=255)
                                                                                                                   ggCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctgatgcttct                     >  1:3762177‑M2/1‑23 (MQ=255)
                                                                                                                    gCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctgatgcttctc                    <  2:2205196‑M2/140‑119 (MQ=255)
                                                                                                                    gCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcagtgtgcgctgatgcttctc                    <  2:1611373‑M2/140‑119 (MQ=255)
                                                                                                                       ggCACAACTGGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgcgttatggtgcattgtgcgctgatgcttctcttc                 <  2:6008325‑M2/140‑122 (MQ=255)
                                                                                                                           ccactTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttagattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctgatgcttctcttcagtg             >  2:8931657‑M2/3‑15 (MQ=255)
                                                                                                                           caACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctgatgcttctcttcagtg             >  1:4965774‑M2/1‑15 (MQ=255)
                                                                                                                           caACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctgatgcttctcttcagtg             >  1:11082348‑M2/1‑15 (MQ=255)
                                                                                                                              cTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctgatgcttctcttcagtgccc          >  1:7662752‑M2/1‑12 (MQ=255)
                                                                                                                                  cTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctgatgcttctcttcagtgccctgct      <  1:6652520‑M2/140‑133 (MQ=255)
                                                                                                                                   tGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctgatgcttctcttcagtgccctgctg     <  2:4843705‑M2/140‑134 (MQ=255)
                                                                                                                                     gATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctgatgcttctcttcagtgccctgctgta   >  1:5746990‑M2/1‑5 (MQ=255)
                                                                                                                                      atatgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgcgttatggtgcattgtgcgctgatgcttctcttcagtgccctgctgtac  <  2:3262889‑M2/140‑137 (MQ=255)
                                                                                                                                         |                                                                                                                                        
CAGTATCGTCGACGGCAGCGGCCCGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATGGGGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTTCTCTTCAGTGCCCTGCTG  >  NZ_CP025268/1774148‑1774421

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.