Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP025268623,6470AT21.1% 656.2 / 53.9 325intergenic (‑88/‑287)fepB/entCFe2+‑enterobactin ABC transporter substrate‑binding protein/isochorismate synthase EntC
Reads supporting (aligned to +/- strand):  ref base A (96/150);  new base T (0/66);  total (97/228)
Fisher's exact test for biased strand distribution p-value = 8.25e-13
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 344 total aligned reads displayed.

GCAAAAGTCCTGTTAATAGAAGGGCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCATT  >  NZ_CP025268/623508‑623786
                                                                                                                                           |                                                                                                                                           
gcacacgTCCTGTGAAGAGACGGGCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATCAGGTTCAGGGCGTAATGACAACTTCGACAAAGCGCACAAGCCGTCCCCTCGCCCCTTTGGGgaga                                                                                                                                             <  1:7363309/134‑1 (MQ=255)
gCAAAAGTCCTGTTCAGAGACGGGCGTTGCGGTAGAGCGGGGCGAGTCTCACACATCAGCGTCCTGTTATTACTAAGGTTAAGGGCGTAATGACAACTTCGACACAGCGCCCAATCCGTCCCCTCGCCCCTTTGGGgaga                                                                                                                                             <  2:1666216/140‑1 (MQ=255)
gCAAAAGTCCTGTTAATAGAAGGGCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGgaga                                                                                                                                             <  2:8500813/140‑1 (MQ=255)
gCAAAAGTCCTGTTAATAGAAGGGCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGgaga                                                                                                                                             <  1:7953013/140‑1 (MQ=255)
gCAAAAGTCCTGTTAATAGAAGGGCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGgaga                                                                                                                                             <  2:3425934/140‑1 (MQ=255)
gCAAAAGTCCTGTTAATAGAAGGGCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGgaga                                                                                                                                             <  1:3961868/140‑1 (MQ=255)
gCAAAAGTCCTGTTAATAGAAGGGCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGgaga                                                                                                                                             <  2:7548613/140‑1 (MQ=255)
   aaaGTCCTGTTAATAGAAGGGCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAggg                                                                                                                                          <  1:10079879/140‑1 (MQ=255)
   aaaGTCCTGTTAATAGAAGGGCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAggg                                                                                                                                          >  1:5101573/1‑140 (MQ=255)
    aaGTCCTGTTAATAGAAGGGCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGt                                                                                                                                         <  1:884439/140‑1 (MQ=255)
     aGTCCTGTTAATAGAAGGGCGTTGCGGTAGAGCGGGGCGAGTCTCACACATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGtt                                                                                                                                        <  2:10727448/140‑1 (MQ=255)
      gTCCTGTTAATAGAAGGGCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCCTTGGGG‑GAGGGTTAg                                                                                                                                      <  2:10297061/140‑1 (MQ=255)
        ccTGTTAATAGAAGGGCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAgg                                                                                                                                     <  1:11289888/140‑1 (MQ=255)
           gTTAATAGAAGGGCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTg                                                                                                                                  >  1:1786456/1‑140 (MQ=255)
            ttAATAGAAGGGCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGTGTGGTTTAGGGTgt                                                                                                                                 <  2:1941887/140‑2 (MQ=255)
                 acaaGGGCGTTGCGGTAGAGCGGGGCGAGTCTCAAAACTCAGCTTCCTGTTATTAATCAGGTTACGGGCGTAATGACAAATACGACAACGCGCACAAGCCGTCCCCTCGCCCCTTTGGGTATTGGGTTTGGGTGAGGGGa                                                                                                                            <  2:5819198/138‑1 (MQ=255)
                 aGAAGGGCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGa                                                                                                                            >  1:9210295/1‑140 (MQ=255)
                      ggCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcagc                                                                                                                       >  2:8875298/1‑140 (MQ=255)
                      ggCGTTCCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTATGGGGAGAGGGTTAGGGTGAGGGGAAcagc                                                                                                                       >  2:3566587/1‑140 (MQ=255)
                        cGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcagcca                                                                                                                     >  1:4324167/1‑140 (MQ=255)
                         gtggCGGTAGAGCGGGGCGAGTCTCACACATCCGCTTCCTGTTATTAATAAGGTTACGGGCGTAATGACAAATTCTACAAAGCGCACACTCCGTCCCCTCGCCCCTTTGGGTAGTGGTTTGGGGTGCGGGGAAcagccag                                                                                                                    <  2:9835422/137‑1 (MQ=255)
                          ttGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcagccagc                                                                                                                   >  2:2939071/1‑140 (MQ=255)
                          ttGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcagccagc                                                                                                                   >  2:9401722/1‑140 (MQ=255)
                           ggCGGGAGAGCGCGCCCAGTCACACACCTCACCTTCCTGTTATTAATAAGCTTAAGGGCGTATGCTCAAATTCGACAAAGCGCACAATCCGTCCCCACTCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGATCAGCCATCa                                                                                                                  <  2:10907763/139‑1 (MQ=21)
                            gCGGTAGAGCGGGGCGAGTCTAACAAATCAGCTTCCTGTTATTAATAAGGATAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCAc                                                                                                                 <  2:11081491/140‑1 (MQ=255)
                             cGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACt                                                                                                                <  2:9206849/140‑1 (MQ=255)
                             cGGGAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAGTTCGACATAGCGCACAATCCGTCCACTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACt                                                                                                                >  1:4688823/1‑140 (MQ=255)
                               gTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTgg                                                                                                              >  1:2303441/1‑140 (MQ=255)
                                  gagCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTTATAAGGTTAAGGGCGTAATGACAAAGTCGACAAAGCGCACAATCCGTCCCCTCGCCCCATTGGGGAGAGGGTTAGGGTGAGGGTAACAGCCAGCACGGGTGc                                                                                                           <  2:4026016/140‑1 (MQ=39)
                                   agCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGTAGAGGGTTTGGGTGAGGGGAACAGCCAGCACTGGTGCg                                                                                                          <  1:9663339/140‑1 (MQ=255)
                                   agCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCg                                                                                                          <  2:9059797/140‑1 (MQ=255)
                                   agCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCg                                                                                                          >  2:6757262/1‑140 (MQ=255)
                                     gggggCGAGTCTCACAAATCTGCTTCCTGTTATTAATAAGGTTAAGGGCGTAAGGAAAAATTCGACAAAGCGCACATTCCGTCCCCTCGCCCCTTGGGGTAGTGGGTTTGGGTGTGGGGAACAGCCAGCACTGGTGCGaa                                                                                                        <  2:5161534/139‑1 (MQ=255)
                                     cGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTGTGGGGAGAGGGTTAGGGTGAGGGGACCAGCCAGCACTGGTGCgca                                                                                                        >  2:10182504/1‑138 (MQ=255)
                                       gggCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACa                                                                                                      >  1:11335561/1‑140 (MQ=255)
                                       gggCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACa                                                                                                      >  1:2863306/1‑140 (MQ=255)
                                        ggCGAGTCTCACAAATCAGCTTCCTGTTTTTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACAt                                                                                                     <  2:10229379/140‑1 (MQ=255)
                                             gTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTATGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGTGAGGGTTTGGGTGTGGGGAACAGCCAGCACTGGTGCGAACATTAAcc                                                                                                <  1:10708704/140‑1 (MQ=255)
                                             gTCTCACAAATCAGCGTCCTGTTATTAATAAGGTTAAGGGCGTGATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGGGAGGGGAACAGCCAGCACTGGTGCGAACATTAAcc                                                                                                <  2:6211027/140‑1 (MQ=255)
                                               ctcACAAATCAGCTTCCTGTTATTAATAAGGTTATGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGTGGGGAACAGCCAGCACTGGTGCGAACATTAACCCt                                                                                              <  2:129650/140‑1 (MQ=255)
                                               ctcACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACATTCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCt                                                                                              <  2:11550974/140‑1 (MQ=255)
                                               cacacaAACCTGCTCCGTTTTATTAAAAGGTTTATGGGCTTAAGCACAAATCCGACAACGCCCCCAACCCGGCCCCGCGCCCCTTTGGGGAGTGGGTTTGGGTGCGGGGAACAGCCAGCACTGGTGCGAACATTAACCCt                                                                                              <  1:1316921/138‑1 (MQ=255)
                                                    aaaTCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCAccc                                                                                         <  2:6068626/140‑1 (MQ=255)
                                                     caccAGCTTCCTGTTATTAATCCGGTCAAGGGCGTAAGGAAAAATGCGACAAACCCCACAATCCGACCCCCCCCCCCTTGGGGGAGCGGGTTTGGGGGTGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCAcccc                                                                                        <  1:7512647/137‑1 (MQ=255)
                                                     aaTCAGCTTCCTTTTATTAATAAGGTTATGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGTGGGTTTGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCAcccc                                                                                        <  2:4280481/140‑1 (MQ=255)
                                                         aGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGcc                                                                                    <  2:9702726/140‑1 (MQ=255)
                                                           cTTCCTTTTATTAATACGGTTAAGGGCTTAATGACAAATACTACAAAGCGCACAATCCGACCCCTCGCCCATTTGGGGAGTGGGTTTGGTTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCt                                                                                  <  1:6379186/140‑1 (MQ=255)
                                                           cTTCCTGTTATTATTTAGTTTAAGGGCGTTATGACAAATTCGACAATGCGCACATTCCGTCCCCTGGCCCCTTTGGGGTGAGGTTTTGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCt                                                                                  <  1:6876666/140‑1 (MQ=255)
                                                           cTTCCTGTTATTAATCAGGTTAAGGGCGTAATGACACATTCGACCACGCGCACACTCCGTCCCCTCGCCCCTGTGGGGAGAGGGTTAGGCCGAGGGGAACAGCCAGCACTGGTGCGAACATGAACCCTCACCCCAGCCCt                                                                                  <  2:4633972/140‑1 (MQ=255)
                                                           cTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCt                                                                                  >  2:3715613/1‑140 (MQ=255)
                                                           attCATGTTATTATTAATGTTAATGTCGTAATTAAAAATTCTATAAAGCGCAAAATCCGTCACCTCGCCCCTTTGGGGAGAGGGTTAGGGTTAGGGTATCAGCGAGCTCTGTTGATATCATTAACCCTCTCCCCTGCCCt                                                                                  <  2:10651626/139‑1 (MQ=255)
                                                             tcatGTTATTATTAAGTTTAAGGGCGTAAGTACAAATTCGACAAAGCGCAATTTCCGTCCCCTCGCCCTTTTGGTGTTAGGTTTTGGGTGAGGGTAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCa                                                                                <  1:9571768/137‑1 (MQ=255)
                                                             tCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCGCGCCCATTTGGGGAGTGGGTTTGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCa                                                                                <  1:10690497/140‑1 (MQ=255)
                                                              ccTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCAc                                                                               >  1:9085271/1‑140 (MQ=255)
                                                               cttttattaATAAGTTTAAGGGATTAATTACAAATTCGACAATGCGCAAAATCCGTCCCCTCGCCCTTTTGGGGAGAGGGTTTGGGTGAGGGTAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCAcc                                                                              <  2:2201136/137‑1 (MQ=255)
                                                               cTGTTTTTAATAAGTTTTAGGGCGTATTGACAAATTCTACAAAGCGCACAATCCGTCCCCTCCCCCCTTTGGGGTGAGGGTTTGGGTGAGGGCCACAGCCTGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCAcc                                                                              <  2:2043734/140‑1 (MQ=255)
                                                               cTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGGGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCTAACCCTCTcc                                                                              <  2:10462162/140‑1 (MQ=255)
                                                               cTGTTATTAATAAGGTTAAGGGCGTAATGAAAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCAcc                                                                              <  2:4712747/140‑1 (MQ=255)
                                                                       aataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAgg                                                                      >  2:8600865/1‑140 (MQ=255)
                                                                        ataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAggg                                                                     <  2:962579/140‑1 (MQ=255)
                                                                          aaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGgag                                                                   >  1:11054179/1‑140 (MQ=255)
                                                                           gggTTACGGGCTTAATGACAAATTCGAAAAAGCGAACACTCCGTCCCCCCGCCCCTTTGGGGATTGGTTTTGGGTGTGGGCAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGgaga                                                                  <  1:9205548/139‑1 (MQ=255)
                                                                           cggTTAAGGGCGTAATCAAAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGCAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGgaga                                                                  <  1:9272413/139‑1 (MQ=255)
                                                                           cggTTAAGGGCGTAAGGACAAATTCGACAACGCGCACAATCCGGCCCCTCGCCCCTTTGGGGTGCGGGTTCGGGTGCGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGgaga                                                                  <  1:10361605/139‑1 (MQ=25)
                                                                           agtttcaGGGCGTATTTAAAAATTCCACAAAGCGCACAAGCCGCCCCCGCGCCCCTTTGGGTAGTGGTTTGGGGTGTGGGCAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGgaga                                                                  <  1:2561977/134‑1 (MQ=255)
                                                                           aGGTTAAGGGCGTAATGACAAATTCGACAACGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGTGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGgaga                                                                  <  2:244544/140‑1 (MQ=255)
                                                                           aGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGgaga                                                                  <  2:5620163/140‑1 (MQ=255)
                                                                                aaGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAggggg                                                             <  2:139605/140‑1 (MQ=255)
                                                                                   ggCTTAATGAAAAATCCGAAAAACCCCAAAATCCGTCCCCTCCCCCTTTTGGGGTGTGGGTTTGGGTTTGGGCAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAg                                                          <  1:3663014/140‑1 (MQ=255)
                                                                                     cttAAGGACAAATGCGACAAAGCGCACAATCCGGCCCCGCGCCCCTTTGGGGTGAGGGTTCGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGaa                                                        <  1:6703127/138‑1 (MQ=39)
                                                                                     cgaaaTGCCAAATTCCACAAAGCCCAAAACCCGCCCCCCCGCCCCTGTGGGGTGCGGGTTTGGGTGCGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGaa                                                        <  1:4546101/137‑1 (MQ=255)
                                                                                     cGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGaa                                                        <  2:7727243/140‑1 (MQ=255)
                                                                                     cGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGaa                                                        <  2:8774885/140‑1 (MQ=255)
                                                                                     cGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCGCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGaa                                                        <  2:6478624/140‑1 (MQ=255)
                                                                                     cGTAAGGACAAATTCGACAAAGCGCACAATCCGGCCCCTCGCCCCTTGGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACGGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGaa                                                        <  2:8729728/140‑1 (MQ=255)
                                                                                          tcaaaaaTACGACAACCCCAACAATCCGCCCCCCCGCCCCTTGGGGGTGGGGTTTTGGGGGCGGGCCACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGgcg                                                   <  1:5253181/136‑1 (MQ=255)
                                                                                          tGACAAATACGACAAAGCGCACAAGCCGTCCCCGCGCCCCTTTGGGGAGAGGGTTCGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGgcg                                                   <  1:8479199/140‑1 (MQ=255)
                                                                                          gcaCAACTTCCACACAGCCCACAATCCGACCCCCCGCCCCTTTGGGGAGAGGGTCAGGGTGAGGGGAACCGCCAGCACTGGTGCGAACAATAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGgcg                                                   <  1:2703285/138‑1 (MQ=21)
                                                                                            aCAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGTGAGGGTTAGGGTGTGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCa                                                 <  2:4491619/140‑1 (MQ=255)
                                                                                                 ttCGACAAAGCGCACAATCCGTCCCCCCCCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACa                                            <  1:7452383/140‑1 (MQ=255)
                                                                                                        aaGCGCACAATCCGTCCCCTCGCCCGTTTGGGGAGTGGGTTTGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACAtt                                     <  1:5809088/140‑1 (MQ=255)
                                                                                                           cgcACAAGCCGTCCCCTCGCCCCTTTGGGGAGCGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTgcg                                  <  1:11496368/140‑1 (MQ=255)
                                                                                                                   ccGTCCCCTCGCCCCTTTGGGGAGAGGGTTTGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCg                          <  1:10114266/140‑1 (MQ=255)
                                                                                                                        cccTCGCCCTTTTGGGGAGTGGGTTTGGGTGCGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATcc                     <  1:1405655/140‑1 (MQ=255)
                                                                                                                        cccTCGCCCCTTTGGGGTGTGGGTTTGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATcc                     <  2:1101101/140‑1 (MQ=255)
                                                                                                                        cccTCGCCCCTTTGGGGAGTGGTTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATcc                     <  1:565608/140‑1 (MQ=255)
                                                                                                                        cccTCGCCCCTTTGGGGAGAGGGTTAGGGTGTGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATcc                     <  2:2603722/140‑1 (MQ=255)
                                                                                                                        cccTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACAATAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATcc                     <  2:4937551/140‑1 (MQ=255)
                                                                                                                        cccGCGCCCCTTTGGGGAGAGGGGTAGGGGGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCGTATGCGAATcc                     <  2:10108372/140‑1 (MQ=255)
                                                                                                                          cTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCAt                   >  1:11162124/1‑140 (MQ=255)
                                                                                                                          cTCGCCCCTGTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACAGTAACCCTCACCCCAGCCCTCACCCTGGACGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCAt                   >  2:3244673/1‑140 (MQ=255)
                                                                                                                            cGCCCCTTTGGGGTGTGGGTTTGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCa                 <  1:3463451/140‑1 (MQ=255)
                                                                                                                            cGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCa                 >  2:11188502/1‑140 (MQ=255)
                                                                                                                                   ttGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGc          <  1:8759131/140‑1 (MQ=255)
                                                                                                                                       ggAGTGGGTTAGGGTGTGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTtct      <  1:3173887/140‑1 (MQ=255)
                                                                                                                                       ggAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTtct      <  1:8630398/140‑1 (MQ=255)
                                                                                                                                           agGGTTAGGGTGAGGGGACCAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCAtt  >  2:66222/1‑140 (MQ=255)
                                                                                                                                           agGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGaa                                                        >  1:5978293/1‑86 (MQ=255)
                                                                                                                                           agGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCAtt  >  2:8118891/1‑140 (MQ=255)
                                                                                                                                           agGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCAtt  >  2:66121/1‑140 (MQ=255)
                                                                                                                                           |                                                                                                                                           
GCAAAAGTCCTGTTAATAGAAGGGCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCATT  >  NZ_CP025268/623508‑623786

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑