| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 623,653 | 0 | A | T | 20.8% | 662.5 / 38.7 | 331 | intergenic (‑94/‑281) | fepB/entC | Fe2+‑enterobactin ABC transporter substrate‑binding protein/isochorismate synthase EntC |
| Reads supporting (aligned to +/- strand): ref base A (106/137); new base T (0/64); total (107/224) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.29e-14 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 331 total aligned reads displayed.
GTCCTGTTAATAGAAGGGCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCATTTT > NZ_CP025268/623514‑623788 | ttAATAGAAGGGCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGa > 1:4576489/1‑140 (MQ=255) ttAATAGAAGGGCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGa > 1:3674925/1‑140 (MQ=255) aGAAGGGCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGa > 1:9210295/1‑140 (MQ=255) aGAAGGGCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGa > 1:1129655/1‑140 (MQ=255) aGAAGGGAGTTGCGGTAGAGCGGGGCGAGTATCACAATTCTGATTCCTGTTATTAATAAGGTTATGGGCTTAATGACAATTTCGACAATGCGAACAATCCGTCCCCTCGCCCCTTTGGGGAGTGGGTTAGGGTGTGGGGa < 2:4016157/140‑1 (MQ=37) gggCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcag > 2:8869293/1‑140 (MQ=255) ggggTTGCGGTAGTGGGGGGCGAGTCTCACAAATCAGCTTCCTGTTTTTAATAAGTTTCTGGGCGTATTGACAAATTCGAAAAAGCGCACATGCCGGCCCCGCGCCCCTTTGGGGAGTGGGTTTGGGTGTGGGGAAcagc < 2:4435186/137‑1 (MQ=255) ggCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAACGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcagc < 2:2010641/140‑1 (MQ=255) ggCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcagc > 2:96695/1‑140 (MQ=255) ggCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcagc > 2:10130952/1‑140 (MQ=255) cGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcagcca > 1:7850955/1‑140 (MQ=255) cGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcagcca > 1:4324167/1‑140 (MQ=255) cGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcagcca > 2:4701404/1‑140 (MQ=255) gtggCGGTAGAGCGGGGCGAGTCTCACACATCCGCTTCCTGTTATTAATAAGGTTACGGGCGTAATGACAAATTCTACAAAGCGCACACTCCGTCCCCTCGCCCCTTTGGGTAGTGGTTTGGGGTGCGGGGAAcagccag < 2:9835422/137‑1 (MQ=255) ttGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcagccagc > 2:9401722/1‑140 (MQ=255) tGCGGTAGAGCGGGGCGAGTCTCACAAATCAGAGTCCTGTTATTAATATGGTTAAGGGCGTAATGACAAATTCGAAAAAGCGCACAATCCGACCCCTCGCCCCTTTGGGGAGAGGGTTTGGGTGTGGGGAACAGCCAGCa < 2:10767306/140‑1 (MQ=38) gCGGTAGAGCGGGGCGAGTCTAACAAATCAGCTTCCTGTTATTAATAAGGATAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCAc < 2:11081491/140‑1 (MQ=255) cGGTAGTGCGGGGCGTGTCTCACAAATCAGCTTCCTGTTATTAATAAGTTTAAGGGCTTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGTGAGGTTTTGGGTGAGGGTAACAGCCAGCACt < 1:11286459/140‑1 (MQ=255) cGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACt < 2:9206849/140‑1 (MQ=255) gtgCGGGGCGAGTCACAAAAATCAGCTTCCTTTTATTAATAAGTTTAAGGGCGTAATGAAAAATTCTACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGTGTGGGTTGGGGTGTGGGGAACAGCCAGCACTGGTGc < 1:4701404/138‑1 (MQ=37) gagCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGc > 1:6764624/1‑140 (MQ=255) gagCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGc > 2:10293836/1‑140 (MQ=255) cgCGGGGCGAGTCTCACAAATCCGCTTCCTGTTATTAATAAGGTTACGGGCGTAATGACAAATTCGACAAAGCGCCCAATCCGTCCCCTCGCCCCTTTGGGGAGAGGTTTAGGGTGAGGGGAACAGCCAGCACTGGTGCg < 2:4799911/139‑1 (MQ=255) agCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCg < 2:9059797/140‑1 (MQ=255) agCGGGGAGAGGCTCACCAAGCAGCTGCCTTTTATTAATAAGGTGAAGGGAGTAATGAAAAATAAGACAAAGCGCACAATCCCTCCCCTAGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCg < 2:10958584/140‑1 (MQ=25) cGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGaa > 1:962579/1‑140 (MQ=255) aggggCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGaa > 1:9144372/2‑140 (MQ=255) gggCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACa > 1:2863306/1‑140 (MQ=255) gAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTaa > 1:10081027/1‑140 (MQ=255) aGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAAc > 2:10192966/1‑140 (MQ=255) gTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATTACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCATTTGGGGAGAGGTTTTGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAAcc < 2:5878424/140‑1 (MQ=255) tcacacaAATCACCTTCCTTTTATTATTAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGTGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAAccc < 2:2550547/137‑1 (MQ=38) ctcACAAATCAGCTTCCTTTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGAAAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGTGGGTACGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCt < 1:8735647/140‑1 (MQ=38) ctcACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCt < 2:2939874/140‑1 (MQ=255) ctcAAAACTCAGCTTCATGTTATTAATAATGTTAAGGGCGTAATGACAATTTCGACAAAGCGAACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCt < 2:10371379/140‑1 (MQ=37) caAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCAcc < 2:1635751/140‑1 (MQ=255) caccAGCTTCCTGTTATTAATCCGGTCAAGGGCGTAAGGAAAAATGCGACAAACCCCACAATCCGACCCCCCCCCCCTTGGGGGAGCGGGTTTGGGGGTGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCAcccc < 1:7512647/137‑1 (MQ=255) aTCAGCTTCCTGTTATTAATAAGGTTACGGGGTTAATGAAAAATTCGAAAAAGCGCACAATCCGTCCCCGCGCCCCTTTGGGTAGTGGGTTCGGGTGCGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCAcccta < 1:6659420/140‑3 (MQ=255) tCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAg > 1:7315432/1‑140 (MQ=255) cAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGc > 1:8843714/1‑140 (MQ=255) cAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGc > 1:10748227/1‑140 (MQ=255) aGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGcc < 2:9702726/140‑1 (MQ=255) aGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGcc < 2:6814626/140‑1 (MQ=255) cgtCCTGTTATTAATCAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCt < 2:10011273/138‑1 (MQ=255) cTTCCTGTTTTTAATATGGTTAAGGGCGTAATGACAAAGTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACAGTAACCCTCACCCCAGCCCt < 2:6667219/140‑1 (MQ=255) cTTCATTTTATTAATAAGGTTATGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGACCCCTCGCCCCTTTGGGGAGAGGGTTCGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCt < 1:4004372/140‑1 (MQ=37) tCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAACGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCa < 2:6258741/140‑1 (MQ=255) tCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCGCGCCCATTTGGGGAGTGGGTTTGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCa < 1:10690497/140‑1 (MQ=255) ccTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCAc > 1:9085271/1‑140 (MQ=255) ccTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCAc > 2:5647546/1‑140 (MQ=255) cTGTTATTAATACGGTTCCGGGCGTAAGGACAAATTCTACAAAGCGCCCACTCCGTCCCCTCGCCCCTTTGGGGTGGGGGTTTGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCAcc < 2:2201099/140‑1 (MQ=25) attaATAAGGTTAAGGGCGTAATGACAAATTCGAAAAAGCGCACAATCCGTCCCCTCGCCCATTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGa < 2:8130427/140‑1 (MQ=255) cggTTAAGGGCGTAATCAAAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGCAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGgaga < 1:9272413/139‑1 (MQ=255) agtttcaGGGCGTATTTAAAAATTCCACAAAGCGCACAAGCCGCCCCCGCGCCCCTTTGGGTAGTGGTTTGGGGTGTGGGCAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGgaga < 1:2561977/134‑1 (MQ=255) ggTTTAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGagag > 2:3687808/1‑140 (MQ=255) ggTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGagag > 1:139605/1‑140 (MQ=255) aaGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAggggg < 2:139605/140‑1 (MQ=255) ggCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAg < 2:3488385/140‑1 (MQ=255) cGTAATGCCAAATTCGACAAAGCGCACAATCCGTCCCCGCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGaa < 2:1267898/140‑1 (MQ=255) cGTAATGACAAATTCTACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGTGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGaa < 2:1793661/140‑1 (MQ=255) cGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGaa < 2:7727243/140‑1 (MQ=255) cGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCGCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGaa < 2:6478624/140‑1 (MQ=255) cGTAATAAAAAATCCCAAAACGCGCAAAACCCGGCCCCCCGCCCATTTGGGTTGTGGTTTGGGTTGTGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGaa < 1:127227/140‑1 (MQ=255) tAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGCGGGTTAGGGTGAGGGGACCAGCCAGAACTGGGGCGACCCTTAACCCTCACCCCAGCACTCACCCGGGACGGGAGAGGGGGCAGAACg > 2:2822181/1‑140 (MQ=25) tAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCCGAACg > 2:4050690/1‑140 (MQ=255) tAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACg > 2:11352228/1‑140 (MQ=255) tAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACg > 1:3295257/1‑140 (MQ=255) tAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACg > 2:346409/1‑140 (MQ=255) tAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACg > 1:11117230/1‑140 (MQ=255) tAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACg > 1:5927101/1‑140 (MQ=255) tAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTGTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACg > 1:10176441/1‑140 (MQ=255) tGACAAATACGACAAAGCGCACAAGCCGTCCCCGCGCCCCTTTGGGGAGAGGGTTCGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGgcg < 1:8479199/140‑1 (MQ=255) gcaCAACTTCCACACAGCCCACAATCCGACCCCCCGCCCCTTTGGGGAGAGGGTCAGGGTGAGGGGAACCGCCAGCACTGGTGCGAACAATAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGgcg < 1:2703285/138‑1 (MQ=21) agACACATGCGACAAAGCGCACAATCCGTCCCCTCGCCCCATTGCGGAGAGGGTTCGGTTGAGGGGAACAGCCAGCACTGGTGCGAACATTTACCCTCACACCAGCCCTCTCCCTGGACGGGAGAGGCGGCACAACGgcg < 2:4614381/139‑1 (MQ=255) aaaatttCGACAACGCGACAAATCGGTCCCCTCGCCCTTTGGGTGTGTGGTTTTGGTTGCGGGCAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCa < 1:3464637/135‑1 (MQ=255) aaaaaTTCTACAACGCCCACAACCCGCCCCCACGCCCTTTGGGGGTGTGGTTTTGGGTGTGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCa < 1:1058206/138‑1 (MQ=255) ttCGACAAAGCGCACAATCCGTCCCCCCCCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACa < 1:7452383/140‑1 (MQ=255) cAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATcaca < 1:8601865/140‑1 (MQ=255) cAAAGCGCACAACCGGCCCCCTCGCCCTTTGGGGGTGTGGGTTGGGGTGTGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATcaca < 1:5198410/140‑1 (MQ=255) aaaGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGTGGGTTAGGGTGAGGGGAACCGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACAt < 2:8535269/140‑1 (MQ=255) aaGCGCACAATCCGTCCCCTCGCCCGTTTGGGGAGTGGGTTTGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACAtt < 1:5809088/140‑1 (MQ=255) cgcACAATCCGTCCCCCCGCCCATTTGGGGAGAGGGTTAGGGTGCGGGTAACAGCCAGCACTGGTGCGAACATTAACCCTCNCCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATNACATTgcg < 1:6191430/140‑1 (MQ=37) gcACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTgcgc < 2:6620230/140‑1 (MQ=255) cacaATCCGCCCCCTCCCCCTTTTGGGGTGTGGGTTTGGGTGTGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCt < 1:152956/140‑1 (MQ=255) ccGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCg < 2:8768531/140‑1 (MQ=255) gTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACACTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGaa < 2:8699373/140‑1 (MQ=255) cccTCGCCCCTTTGGGGTGTGGGTTTGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATcc < 2:1101101/140‑1 (MQ=255) cccTCGCCCCTTTGGGGAGTGGTTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATcc < 1:565608/140‑1 (MQ=255) cccTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTACCCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATcc < 2:4937615/140‑1 (MQ=255) cccTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATcc < 2:6075982/140‑1 (MQ=255) cccTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATcc < 2:5223472/140‑1 (MQ=255) cGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCa > 2:11188502/1‑140 (MQ=255) cGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCa > 1:11486416/1‑140 (MQ=255) cttttGGGTTGTGGTTTTGGGTGTGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCaataa < 1:197450/138‑1 (MQ=255) cTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCaataat > 1:2351339/1‑140 (MQ=255) ggggAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTACCCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCAACAATAATGCtt < 2:10591522/140‑1 (MQ=255) ggggAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCtt > 1:9524065/1‑140 (MQ=255) agGGTTAGGGTGAGGGGAACCGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCAtt < 2:2416646/140‑1 (MQ=255) ggTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCAtttt > 2:7436682/1‑140 (MQ=255) ggTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCAtttt > 1:11038013/1‑140 (MQ=255) | GTCCTGTTAATAGAAGGGCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCATTTT > NZ_CP025268/623514‑623788 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |