BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	674,619	T→C	pseudogene (977/977 nt)	ybeQ ←	SEL1‑like repeat protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	674,619	0	T	C	99.7%	2550.7 / NA	732	pseudogene (977/977 nt)	ybeQ	SEL1‑like repeat protein
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (371/359); minor base A (0/2); total (371/361)
Fisher's exact test for biased strand distribution p-value = 2.43e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 734 total aligned reads displayed.

CGGAAGTGCTGACGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTT‑CC‑GACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAGGT  >  NZ_CP025268/674482‑674754

cGGAAGTGCTGACGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATACAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTa                                                                                                                                         >  1:7092441/1‑140 (MQ=255)

        cTGACGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAAt                                                                                                                                 >  1:3202588/1‑140 (MQ=255)

        cTGACGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAAt                                                                                                                                 >  1:9790312/1‑140 (MQ=255)

        cTGACGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAAt                                                                                                                                 >  2:6749004/1‑140 (MQ=255)

        cTGACGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAAt                                                                                                                                 >  2:7070584/1‑140 (MQ=255)

        cTGACGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAAt                                                                                                                                 >  1:6798787/1‑140 (MQ=255)

           aCGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCtt                                                                                                                              <  1:9452775/140‑1 (MQ=255)

            cGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTc                                                                                                                             >  2:1033424/1‑140 (MQ=255)

                aTGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGtc                                                                                                                         >  1:9061974/1‑140 (MQ=255)

                aTGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGtc                                                                                                                         >  2:696113/1‑140 (MQ=255)

                  gCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGtctc                                                                                                                       >  2:7272655/1‑140 (MQ=255)

                   cccGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCa                                                                                                                      >  2:5581778/1‑140 (MQ=255)

                     cGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATCGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACg                                                                                                                    <  1:10948027/140‑1 (MQ=255)

                     cGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACg                                                                                                                    <  2:8889113/140‑1 (MQ=255)

                      gAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGa                                                                                                                   >  1:10000812/1‑140 (MQ=255)

                       aaaTGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGaa                                                                                                                  <  1:6085870/140‑1 (MQ=255)

                             ggTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑cct                                                                                                           >  2:2335498/1‑139 (MQ=255)

                              gTCATGACCAGTTCCAGAGACGCCGGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑cctg                                                                                                          >  1:4130432/1‑138 (MQ=255)

                                  tGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTg                                                                                                      >  2:5027498/1‑140 (MQ=255)

                                        gTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACAtct                                                                                                >  1:7534933/1‑140 (MQ=255)

                                        gTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACAtct                                                                                                <  1:10094968/140‑1 (MQ=255)

                                                 aCGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCg                                                                                       <  1:10248306/140‑1 (MQ=255)

                                                 aCGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCg                                                                                       <  1:9293255/140‑1 (MQ=255)

                                                 aCGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCg                                                                                       <  2:5177164/140‑1 (MQ=255)

                                                  cGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCgg                                                                                      >  2:3000658/1‑140 (MQ=255)

                                                  cGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCgg                                                                                      >  2:5374224/1‑140 (MQ=255)

                                                   gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGa                                                                                     >  1:4922114/1‑140 (MQ=255)

                                                   gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGa                                                                                     >  1:1413260/1‑140 (MQ=255)

                                                   gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGa                                                                                     >  1:1724791/1‑140 (MQ=255)

                                                   gCCCGGTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGa                                                                                     >  1:263464/1‑140 (MQ=255)

                                                    cccGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAATAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTACT‑GACTGACATCTATGGTTCCGGAt                                                                                    >  2:8102086/1‑140 (MQ=255)

                                                    cccGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGAt                                                                                    >  1:7696565/1‑140 (MQ=255)

                                                        tttGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACt                                                                                <  1:5836704/140‑1 (MQ=255)

                                                           gAGCCGTAATAGTCTGATTTCGCACATCAATAAAGAGAATATGGGCCGAATGAAATTCCCCTGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTTaa                                                                             <  1:9537563/140‑1 (MQ=255)

                                                           gAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGaa                                                                             <  2:4068334/140‑1 (MQ=255)

                                                           gAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGaa                                                                             <  1:3343966/140‑1 (MQ=255)

                                                              ccGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACtt                                                                          >  2:1243721/1‑140 (MQ=255)

                                                                gTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTa                                                                        <  1:10629779/140‑1 (MQ=255)

                                                                   aTAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGa                                                                     <  2:1676357/140‑1 (MQ=255)

                                                                     aGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATa                                                                   <  1:2808148/140‑1 (MQ=255)

                                                                       tCTGATTTCGCACAGCCCTAAAGAGAATGTGGGCCGAATGAAATTCCCCGGCGCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCGGACTGACATCTCGGGTTCCGGATGTCTGTCCTTTAGGATACa                                                                 >  2:11541908/1‑140 (MQ=255)

                                                                       tCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGTATGACTGAACTTTACGATACa                                                                 >  2:6111277/1‑140 (MQ=255)

                                                                       tCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACa                                                                 >  1:558252/1‑140 (MQ=255)

                                                                       tCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACa                                                                 <  1:3905285/140‑1 (MQ=255)

                                                                        cTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTaa                                                                                                                                   >  1:8469443/1‑74 (MQ=255)

                                                                        cTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGAGGACTGAACTGTACGATACAg                                                                >  2:10888194/1‑140 (MQ=255)

                                                                         tGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTgactgac                                                                                                    <  2:8558098/103‑1 (MQ=255)

                                                                         tGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAgg                                                               >  1:8019809/1‑140 (MQ=255)

                                                                           aTTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTc                                                             >  1:8230001/1‑140 (MQ=255)

                                                                           aTTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTCATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGaa                                                                             <  1:11404857/124‑1 (MQ=255)

                                                                               cGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCgaga                                                         <  1:5129467/140‑1 (MQ=255)

                                                                                gCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGagag                                                        <  2:3338133/140‑1 (MQ=255)

                                                                                gCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGagag                                                        <  1:2455424/140‑1 (MQ=255)

                                                                                 cacaGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGc                                                       >  1:1254420/1‑140 (MQ=255)

                                                                                 cacaGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGc                                                       <  2:1044950/140‑1 (MQ=255)

                                                                                     gCAATAAAGAGAATATGGGCCGAATGAAAGTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGt                                                   <  2:6409540/140‑1 (MQ=255)

                                                                                              agaATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGGAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGGTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCg                                          >  2:9583982/1‑140 (MQ=255)

                                                                                                aaTATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGAc                                        >  2:2723627/1‑140 (MQ=255)

                                                                                                aaTATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGAc                                        >  1:404439/1‑140 (MQ=255)

                                                                                                aaTATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGAc                                        >  2:3723252/1‑140 (MQ=255)

                                                                                                aaTATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGAc                                        >  2:6563757/1‑140 (MQ=255)

                                                                                                aaTATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTACGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGAc                                        >  2:2507080/1‑140 (MQ=255)

                                                                                                 atatGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACa                                       <  1:10372462/140‑1 (MQ=255)

                                                                                                 atatGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACa                                       <  2:2093701/140‑1 (MQ=255)

                                                                                                   atGGGCCGAATGAAAGTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAgg                                     <  1:10583407/140‑1 (MQ=255)

                                                                                                    tGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGt                                    <  1:4575958/140‑1 (MQ=255)

                                                                                                     gggCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTc                                   >  1:7894618/1‑140 (MQ=255)

                                                                                                       gCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTctt                                 >  2:9009816/1‑140 (MQ=255)

                                                                                                        ccGAATGAACTTCCCCGGCCCTTGTATTTATCTATACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACCTCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTcttc                                <  2:11239458/140‑1 (MQ=255)

                                                                                                        ccGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTcttc                                <  2:9296589/140‑1 (MQ=255)

                                                                                                         cGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTcttcc                               <  2:10077547/140‑1 (MQ=255)

                                                                                                          gAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTcttcct                              >  1:3592412/1‑140 (MQ=255)

                                                                                                          gAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGCCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTcttcct                              >  1:5450485/1‑140 (MQ=255)

                                                                                                            aTGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTcttccttc                            <  1:4753357/140‑1 (MQ=255)

                                                                                                              gAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTtctc                          <  2:3906348/140‑1 (MQ=255)

                                                                                                              gAAAGTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAATTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTtctc                          <  1:10766723/140‑1 (MQ=255)

                                                                                                                aagtCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCg                        <  2:1938352/137‑1 (MQ=255)

                                                                                                                aaTTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCg                        <  1:437643/140‑1 (MQ=255)

                                                                                                                  ttCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTa                      <  2:3238595/140‑1 (MQ=255)

                                                                                                                  ttCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTa                      <  1:3052086/140‑1 (MQ=255)

                                                                                                                  ttCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTa                      <  2:4408456/140‑1 (MQ=255)

                                                                                                                   tCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAg                     <  1:11589458/140‑1 (MQ=255)

                                                                                                                   tCCCCGGCCCTTGTTTTTAACTCTACACTAACTCCTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGCTGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAg                     <  1:7317470/140‑1 (MQ=255)

                                                                                                                     cccGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTg                   >  1:5934844/1‑140 (MQ=255)

                                                                                                                      ccGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGa                  <  2:9520166/140‑1 (MQ=255)

                                                                                                                       cGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGATTTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGAt                 <  1:2093864/140‑1 (MQ=255)

                                                                                                                       cGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGAt                 <  2:1393329/140‑1 (MQ=255)

                                                                                                                              tGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAAt          >  1:11208387/1‑140 (MQ=255)

                                                                                                                                tttttATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATgg        <  2:4555578/140‑1 (MQ=255)

                                                                                                                                tttttATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATgg        <  1:1501882/140‑1 (MQ=255)

                                                                                                                                tttttATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATgg        <  2:5866948/140‑1 (MQ=255)

                                                                                                                                 ttttATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGc       <  1:229101/140‑1 (MQ=255)

                                                                                                                                 ttttATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGc       <  1:6677527/140‑1 (MQ=255)

                                                                                                                                 ttttATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGc       <  1:8578774/140‑1 (MQ=255)

                                                                                                                                 ttttATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGc       <  2:10616881/140‑1 (MQ=255)

                                                                                                                                  tttATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGcc      <  2:486732/140‑1 (MQ=255)

                                                                                                                                     aTCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAgg   <  2:7496688/140‑1 (MQ=255)

                                                                                                                                     aTCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAgg   <  1:6282422/140‑1 (MQ=255)

                                                                                                                                     aTCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAgg   <  1:6480039/140‑1 (MQ=255)

                                                                                                                                     aTCTCTACAGTAAATCTTCAGTCTCACGAATTT‑CCTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAgg   <  1:8762912/140‑1 (MQ=255)

CGGAAGTGCTGACGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTT‑CC‑GACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAGGT  >  NZ_CP025268/674482‑674754

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`