Predicted mutation
evidence seq id position mutation annotation gene description
RA NZ_CP025268 758,126 T→C D124D (GAT→GAC sucA → 2‑oxoglutarate dehydrogenase E1 component

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP025268758,1260TC100.0% 2356.4 / NA 671D124D (GAT→GACsucA2‑oxoglutarate dehydrogenase E1 component
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (387/284);  total (387/284)

Only 100 of 671 total aligned reads displayed.

CGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGATCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCAAACCTACTGCGGCCCGATTGGTG  >  NZ_CP025268/757990‑758262
                                                                                                                                        |                                                                                                                                        
cGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCg                                                                                                                                       >  1:4239881/1‑140 (MQ=255)
cGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCg                                                                                                                                       >  1:2214910/1‑140 (MQ=255)
 gATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGt                                                                                                                                      <  1:11335086/140‑1 (MQ=255)
 gATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGt                                                                                                                                      <  1:9616731/140‑1 (MQ=255)
  aTCTCCGACCCTGACACCAATGTGAAGAAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATCTAGTGGCCGATCTGGACCCGTc                                                                                                                                     >  2:11259158/1‑140 (MQ=255)
       cGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTcc                                                                                                                                <  2:5061611/140‑1 (MQ=255)
        gACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCa                                                                                                                               <  2:4915418/140‑1 (MQ=255)
            cTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGAt                                                                                                                           <  1:6057195/140‑1 (MQ=255)
            cTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGAt                                                                                                                           <  2:1186348/140‑1 (MQ=255)
             tGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACTATc                                                                                                                          >  2:9622416/1‑140 (MQ=255)
              gACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCt                                                                                                                         >  2:10300139/1‑140 (MQ=255)
               acacCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTg                                                                                                                        >  1:7441325/1‑140 (MQ=255)
                   cAATGTGAAGCAGGTTAAAGTCCTGCAGCTCAGTTTCGCATACGGCTTCCGGGGTCTCCTGCATGCGAATCTCGAGCCGCTGGGACTGTGGCAGCACGATCAAGTGGCCGATCTGGACCCGTCTTTCCCCGTTCTgtgcg                                                                                                                    >  2:2858303/1‑136 (MQ=255)
                       gtgAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGc                                                                                                                <  2:20489/140‑1 (MQ=255)
                        tgAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGGGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCa                                                                                                               <  2:5330028/140‑1 (MQ=255)
                        tgAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTATGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCa                                                                                                               <  1:11151027/140‑1 (MQ=255)
                        tgAAGCAGGTTAAAGGCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAACGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCa                                                                                                               <  2:7390438/140‑1 (MQ=255)
                           aGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGAc                                                                                                            <  1:8653985/140‑1 (MQ=255)
                               ggTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTcc                                                                                                        <  1:5617732/140‑1 (MQ=255)
                               ggTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTcc                                                                                                        >  1:10229304/1‑140 (MQ=255)
                               ggTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTcc                                                                                                        <  1:1682604/140‑1 (MQ=255)
                               ggTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGAGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTcc                                                                                                        >  2:7721730/1‑140 (MQ=255)
                                gTTAAAGTCCTGCCGCTCAGTAACGCATACCGCTTCCGTGGTCCCCAGCATGCGACTCTCGATCCGCTGGGAGTGTGGCAGCAAGATGCAGTGGCCGAGCTGGACCCGTCTGTCCCCGCTCTGACCGTAGCCGACGTCCa                                                                                                       >  2:10889832/1‑140 (MQ=255)
                                gTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCCGCCTGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCa                                                                                                       >  2:6241351/1‑140 (MQ=255)
                                gTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCa                                                                                                       >  1:6635959/1‑140 (MQ=255)
                                  tAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAgg                                                                                                     >  2:7962577/1‑140 (MQ=255)
                                  tAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAgg                                                                                                     <  1:1353800/140‑1 (MQ=255)
                                   aaaGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGga                                                                                                    <  2:10689576/140‑1 (MQ=255)
                                    aaGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTGCCAGgag                                                                                                   >  1:10617997/1‑140 (MQ=255)
                                          tGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTNGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTc                                                                                             >  1:6180315/1‑140 (MQ=255)
                                          tGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTc                                                                                             >  2:1384729/1‑140 (MQ=255)
                                               cTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGt                                                                                        <  2:4427778/140‑1 (MQ=255)
                                                 cATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCg                                                                                      >  2:64797/1‑140 (MQ=255)
                                                 cATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGACCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCg                                                                                      >  2:3237658/1‑140 (MQ=255)
                                                   ttAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGt                                                                                    <  2:4739855/140‑1 (MQ=255)
                                                     aaCGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTc                                                                                  >  2:10130805/1‑140 (MQ=255)
                                                         cATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCa                                                                                                               >  2:1616046/1‑107 (MQ=255)
                                                         cATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCAttt                                                                              >  1:3066176/1‑140 (MQ=255)
                                                            aCCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGcc                                                                           >  2:676135/1‑140 (MQ=255)
                                                            aCCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGcc                                                                           >  1:9937122/1‑140 (MQ=255)
                                                            aCCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGcc                                                                           >  1:1929831/1‑140 (MQ=255)
                                                            aCCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGcc                                                                           >  1:7750795/1‑140 (MQ=255)
                                                              cGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAg                                                                         >  2:3872783/1‑140 (MQ=255)
                                                                cTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGCCCGACGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCg                                                                       >  1:5224834/1‑140 (MQ=255)
                                                                cTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATATGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCg                                                                       >  2:9029949/1‑140 (MQ=255)
                                                                 ttCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCgg                                                                      >  2:3108736/1‑140 (MQ=255)
                                                                  tCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGc                                                                     >  2:3464833/1‑140 (MQ=255)
                                                                     ggggTCACCAGCTTGCGACTCTCGATCCGCTGGGACTGTGGCGGCCAGATACAGTGGCCGATCGGGCCCCGTCTTTCCACGATCTGACCGCAGCAGACGTCCAGGAGCCCTGCAACGGCGGTTCATTTGCCCGCGGCaca                                                                  >  2:864680/3‑138 (MQ=255)
                                                                        gTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGaa                                                               >  2:7050361/1‑140 (MQ=255)
                                                                        gTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGaa                                                               >  1:7259629/1‑140 (MQ=255)
                                                                         tCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGaaa                                                              <  2:94834/140‑1 (MQ=255)
                                                                             cAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCAt                                                          <  1:5898885/140‑1 (MQ=255)
                                                                                cATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGaa                                                       >  1:4553220/1‑140 (MQ=255)
                                                                                 aTGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGaaa                                                      <  1:10110372/140‑1 (MQ=255)
                                                                                  tGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAAc                                                     >  2:3610067/1‑140 (MQ=255)
                                                                                       aTCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGc                                                >  1:5108007/1‑140 (MQ=255)
                                                                                        tctcGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCg                                               <  1:7050361/140‑1 (MQ=255)
                                                                                         ctcGATCCGATGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGATGCAGACTTCCAGGAGACCTTCAACTTCTGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGa                                              <  1:2754070/140‑1 (MQ=255)
                                                                                          tcGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAg                                             >  1:7998686/1‑140 (MQ=255)
                                                                                              tCCGCTGGGACTGTGGCAGCACGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCCTGAAACTCGGCGAgctgc                                         >  2:7829817/1‑140 (MQ=255)
                                                                                                 gCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTgg                                      >  2:2293547/1‑140 (MQ=255)
                                                                                                    gggACTGTGGCAGCTAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAg                                   <  1:11458730/140‑1 (MQ=255)
                                                                                                    gggACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAg                                   >  2:9801033/1‑140 (MQ=255)
                                                                                                       aCTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGccc                                <  2:4239881/140‑1 (MQ=255)
                                                                                                        cTGTGGCAGCAAGATACAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGCCCTTCACCGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCt                               <  2:7235126/140‑1 (MQ=255)
                                                                                                        cTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCt                               <  2:10409895/140‑1 (MQ=255)
                                                                                                          gtgGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCt                               >  1:528609/1‑138 (MQ=255)
                                                                                                          gtgGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCa                             >  1:7677297/1‑140 (MQ=255)
                                                                                                          gtgGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCa                             <  1:3610067/140‑1 (MQ=255)
                                                                                                          gtgGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCa                             >  1:9096997/1‑140 (MQ=255)
                                                                                                           tgGCAGCAAGATAGAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCaa                            >  1:10900077/1‑140 (MQ=255)
                                                                                                           tgGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCaa                            >  1:8377981/1‑140 (MQ=255)
                                                                                                           tgGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCaa                            >  1:9837671/1‑140 (MQ=255)
                                                                                                           tgGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCaa                            >  1:9281115/1‑140 (MQ=255)
                                                                                                            ggCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAg                           <  1:814945/140‑1 (MQ=255)
                                                                                                            ggCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAg                           <  2:9233537/140‑1 (MQ=255)
                                                                                                            ggCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAg                           <  1:1079194/140‑1 (MQ=255)
                                                                                                                gcaAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCaa                        >  1:3809503/1‑139 (MQ=255)
                                                                                                                 caAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCAAAc                      >  2:2608206/1‑140 (MQ=255)
                                                                                                                  aaGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCAAAcc                     >  1:4864961/1‑140 (MQ=255)
                                                                                                                   aGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCAAACCt                    >  2:2219996/1‑140 (MQ=255)
                                                                                                                     atcaaGTGGCCGATCTGGCCCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGGCAGCGGCACAGAAACCATGAAACTCGCCGAGCTGCGGGATGCCAGCAAGCAAACCtcc                  >  2:8534089/4‑138 (MQ=255)
                                                                                                                     aTAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCAAACCTAc                  >  1:8837610/1‑140 (MQ=255)
                                                                                                                     aTAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCAAACCTAc                  >  1:3413506/1‑140 (MQ=255)
                                                                                                                      tAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCAAACCTACt                 <  2:456632/140‑1 (MQ=255)
                                                                                                                       aaaGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCAAACCTACTg                <  1:9052444/140‑1 (MQ=255)
                                                                                                                         aGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCAAACCTACTGCg              <  1:11626560/140‑1 (MQ=255)
                                                                                                                           tGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCAAACCTACTGCGGc            <  2:5907269/140‑1 (MQ=255)
                                                                                                                             gCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCACACCTACTGCGGccc          >  1:5438267/1‑140 (MQ=255)
                                                                                                                              ccGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGTAACCATGAAACTCGGCGAGCTGCTGGCAGCCCTCCCGCAAGCCTACTGCGGCCCg         >  2:9357397/1‑140 (MQ=255)
                                                                                                                              ccGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCAAACCTACTGCGGCCCg         >  2:9141683/1‑140 (MQ=255)
                                                                                                                              ccGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCAAACCTACTGCGGCCCg         >  2:5585594/1‑140 (MQ=255)
                                                                                                                              ccGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCAAACCTACTGCGGCCCg         >  2:8280710/1‑140 (MQ=255)
                                                                                                                              ccGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCAAACCTACTGCGGCCCg         >  2:11042290/1‑140 (MQ=255)
                                                                                                                              ccGATCTGGACCCGTCTATCCACGATCTGACCGCAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCAAACCTACTGCGGCCCg         >  1:1524033/1‑140 (MQ=255)
                                                                                                                               cGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCAAACCTACTGCGGCCCGa        <  1:10015907/140‑1 (MQ=255)
                                                                                                                                     ggACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCAAACCTACTGCGGCCCGATTGGTg  <  2:8890349/140‑1 (MQ=255)
                                                                                                                                     ggACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCAAACCTACTGCGGCCCGATTGGTg  <  1:2580872/140‑1 (MQ=255)
                                                                                                                                     ggACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCAAACCTACTGCGGCCCGATTGGTg  <  2:6963342/140‑1 (MQ=255)
                                                                                                                                     ggACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCAAACCTACTGCGGCCCGATTGGTg  <  1:314524/140‑1 (MQ=255)
                                                                                                                                        |                                                                                                                                        
CGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGATCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCAAACCTACTGCGGCCCGATTGGTG  >  NZ_CP025268/757990‑758262

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: