| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,215,618 | T→C | pseudogene (386/405 nt) | tfaP → | tail fiber assembly protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,215,618 | 0 | T | C | 99.9% | 2703.6 / NA | 792 | pseudogene (386/405 nt) | tfaP | tail fiber assembly protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (473/318); minor base A (1/0); total (474/318) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 792 total aligned reads displayed.
CAATAGCAGACAGTGGCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAG‑T‑T‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATT > NZ_CP025268/1215481‑1215753 | tAGCAGACAGTGGCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGc > 2:872335/1‑140 (MQ=255) tAGCAGACAGTGGCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGc > 2:7592871/1‑140 (MQ=255) tAGCAGACAGTGGCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGc > 2:5295906/1‑140 (MQ=255) aGCAGACAGTGGCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGcc < 2:3777143/140‑1 (MQ=255) aCAGTGGCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCgg > 2:1953766/1‑140 (MQ=255) aCAGTGGCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCgg > 2:10781998/1‑140 (MQ=255) tGGCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑t > 1:3286351/1‑140 (MQ=255) tGGCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑t > 1:10527507/1‑140 (MQ=255) tGGCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑t > 2:5713598/1‑140 (MQ=255) tGGCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑t > 2:7864111/1‑140 (MQ=255) tGGCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑t > 2:6152070/1‑140 (MQ=255) tGGCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑t > 1:4028460/1‑140 (MQ=255) ggCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑t‑t < 2:1130096/140‑1 (MQ=255) gCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑t‑tc > 1:3544549/1‑139 (MQ=255) gggTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGTACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑t‑tcagg < 1:1315568/140‑5 (MQ=255) ggTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑t‑tcaggc < 1:2514374/140‑6 (MQ=255) ggTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑t‑tcaggc > 2:10178210/1‑135 (MQ=255) aGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGa > 2:3403398/1‑140 (MQ=255) tGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGAc > 1:8539934/1‑140 (MQ=255) gggAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCgg > 1:1537332/1‑140 (MQ=255) gAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGACTGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACCTCCGgcg < 2:7264917/140‑1 (MQ=18) gAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGgcg < 1:7585828/140‑1 (MQ=255) gAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGgcg < 2:677821/140‑1 (MQ=255) gAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGgcg < 2:2694548/140‑1 (MQ=255) gAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGgcg < 1:9355755/140‑1 (MQ=255) gAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGgcg < 1:1151868/140‑1 (MQ=255) gAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGgcg < 1:8716045/140‑1 (MQ=255) gAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGgcg < 2:8920517/140‑1 (MQ=255) aCTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACTCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGt > 1:3784684/1‑140 (MQ=255) aCTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGt > 1:307682/1‑140 (MQ=255) aCTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGt > 1:9025221/1‑140 (MQ=255) ttAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGc > 1:1712211/1‑140 (MQ=255) aagaagATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGTCCTACGCCTCCGTCAGAT‑C‑AGGCCAGATGACATACGGCGAGGTGCTgg > 2:1706795/1‑140 (MQ=17) aagaagATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTgg > 2:450850/1‑140 (MQ=255) aagaagATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTgg > 1:10101496/1‑140 (MQ=255) aagaagATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAAATGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATTACATCCGGCGCGGTGCTgg > 2:5511135/1‑140 (MQ=17) aagaTGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTAt < 1:5413848/140‑1 (MQ=255) aagaTGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTAt < 1:8223520/140‑1 (MQ=255) gaTGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCt > 2:4306429/1‑140 (MQ=255) gaTGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCt < 1:4413646/140‑1 (MQ=255) aTGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTg > 1:4774600/1‑140 (MQ=255) cTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGcc < 1:10862999/140‑1 (MQ=255) gAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGgcg > 1:615031/1‑118 (MQ=255) aCAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCAc < 2:3943757/140‑1 (MQ=255) aCAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCAc < 1:9231405/140‑1 (MQ=255) aCAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTACCTGTTGCCGTCAc < 1:9968591/140‑1 (MQ=255) aCAATATAATTGGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCAc < 1:6936399/140‑1 (MQ=255) cAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCAcc > 1:9677962/1‑140 (MQ=255) atatACTTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTCTCTGTTGCCGTCACcgc > 2:10368411/1‑140 (MQ=11) atatAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACcgc > 1:2933682/1‑140 (MQ=255) tataATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACcgcg > 2:9724468/1‑140 (MQ=255) ataATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGt < 2:7083275/140‑1 (MQ=255) aTTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTCTCTGTTGCCGTCACCGCGTCaa > 1:6338216/1‑140 (MQ=255) ttGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATg < 2:11176342/140‑1 (MQ=255) ttGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATg < 2:8142382/140‑1 (MQ=255) ttGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATg < 1:11187864/140‑1 (MQ=255) ttGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATCGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATg < 1:11622081/140‑1 (MQ=255) gtgtgGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCCGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATg < 2:4082589/139‑1 (MQ=255) ggCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAAt > 1:1853446/1‑140 (MQ=255) gCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATc > 1:8347552/1‑140 (MQ=255) ggATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAg > 1:79186/1‑140 (MQ=255) gATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCaa < 2:2832685/129‑1 (MQ=255) aTTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGca < 2:6593887/140‑1 (MQ=255) aTTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGca < 2:2315854/140‑1 (MQ=255) ttATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGcac < 1:8903994/140‑1 (MQ=255) ttATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGcac < 2:5075/140‑1 (MQ=255) ttATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGcac < 1:739604/140‑1 (MQ=255) aTCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAg > 2:5817820/1‑140 (MQ=255) tGGAAGCACTGGAACTGGTTGATACCTCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGt < 2:9219631/140‑1 (MQ=255) ggcaGCCCTGGCACCGGTTGAGACCTCCAGTGCGCCAGCTATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACCTCCGGCGCGGTGCTGGTATCGGTTGCCGACACCGCGTCAATGTAATCCAGCACAGCGtt < 2:483794/137‑1 (MQ=11) ggAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGtt < 1:5666897/140‑1 (MQ=255) ggAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGtt > 2:9396308/1‑140 (MQ=255) aaGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑TGC‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTaa > 2:1522890/1‑140 (MQ=255) aaGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCgg > 1:2088764/1‑84 (MQ=14) aaGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTaa > 2:6961307/1‑140 (MQ=255) aaGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTaa > 2:9147867/1‑140 (MQ=255) aaGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTaa > 1:9544442/1‑140 (MQ=255) aGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAg > 1:716279/1‑140 (MQ=255) aGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATAGTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAg > 2:9875309/1‑140 (MQ=255) cTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTg > 1:6669151/1‑140 (MQ=255) tGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTTTCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTTAGTCTgg < 2:1164225/140‑1 (MQ=14) tGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTCTCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTgg > 1:7712068/1‑140 (MQ=255) tGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTgg < 2:3706419/140‑1 (MQ=255) ggTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCCCCGCGTCCATGTAATCCAGCACAGCGTTAAGTGTGGTTGTTTc > 2:8541857/1‑140 (MQ=14) gTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTct < 2:8267479/140‑1 (MQ=255) gTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTct > 2:2517016/1‑140 (MQ=255) gTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAAGGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTct > 2:3212594/1‑140 (MQ=255) tGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTctgc < 2:4637922/140‑1 (MQ=255) tGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTctgc < 2:210858/140‑1 (MQ=255) gATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTctgcc < 1:10000165/140‑1 (MQ=255) tACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTctgcctg > 2:1829192/1‑140 (MQ=255) aTCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGt > 1:231482/1‑140 (MQ=255) gTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACCTCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGtt < 2:6274573/140‑1 (MQ=255) tGCGCCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGttt > 1:2709185/1‑140 (MQ=255) gcgcCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTa > 2:6443973/1‑140 (MQ=255) cgcCAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTAc > 1:10663067/1‑140 (MQ=255) ccAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGt > 2:10983055/1‑140 (MQ=255) cAGATATTGAATGGCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAAGGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTc > 1:5069788/1‑140 (MQ=255) ggCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAAtt > 1:7471030/1‑140 (MQ=255) ggCCTACGCCTCCGGCAG‑T‑TCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAAtt > 1:11103133/1‑140 (MQ=255) | CAATAGCAGACAGTGGCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCTTACGCCTCCGGCAG‑T‑T‑AGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCACAGCGTTAAGTCTGGTTGTTTCTGCCTGCGTCAGTTTACGTCCGGCCTGCAATT > NZ_CP025268/1215481‑1215753 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |