BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	1,588,591	A→G	L63S (TTG→TCG)	safA ←	two‑component system connector SafA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	1,588,591	0	A	G	100.0%	678.9 / NA	195	L63S (TTG→TCG)	safA	two‑component system connector SafA
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (154/41); total (154/41)

Only 100 of 198 total aligned reads displayed.

ATGTTAGCGTTGAAGGCATGATGAATAAATATAACAGAACAAACGAGCGACATTTTATCTCCTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCAAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGATTTC  >  NZ_CP025268/1588454‑1588727

           gAAGGCATGATGAATAAATATAACAGAACAAACGAGCGACATTTTATCTCCTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCgaa                                                                                                                                        >  1:4295836/1‑129 (MQ=255)

           gAAGGCATGATGAATAAATATAACAGAACAAACGAGCGACATTTTATCTCCTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCgaa                                                                                                                                        <  2:4295836/129‑1 (MQ=255)

           gAAGGCATGATGAATAAATATAACAGAACAAACGAGCGACATTTTATCTCCTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAAt                                                                                                                             >  2:6284145/1‑140 (MQ=255)

            aaGGCATGATGAATAAATATAACAGAACAAACGAGCGACATTTTATCTCCTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATg                                                                                                                            >  2:3239954/1‑140 (MQ=255)

             aGGCATGATGAATAAATATAACAGAACAAACGAGCGACATTTTATCTCCTTAAAACAATAAAGATTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGa                                                                                                                           <  1:1093997/140‑1 (MQ=255)

              ggCATGATGAATAAATATAACAGAACAAACGAGCGACATTTTATCTCCTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGaa                                                                                                                          <  1:1124384/140‑1 (MQ=255)

                     tgaATAAATATAACAGAACAAACGAGCGACATTTTATCTCCTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTa                                                                                                                   <  1:10680868/140‑1 (MQ=255)

                       aataaataTAACAGAACAAAAGAGCGACATTTTATCTCCTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAg                                                                                                                 <  2:870377/140‑1 (MQ=255)

                                    gAACAAACGAGCGACATTTTATCTCCTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATg                                                                                                    >  1:5233731/1‑140 (MQ=255)

                                         aaCGAGCGACATTTTATCTCCTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGAcc                                                                                               <  1:9909257/140‑1 (MQ=255)

                                              gCGACATTTTATCTCCTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCAttt                                                                                          <  2:2445641/140‑1 (MQ=255)

                                              gCGACATTTTATCTCCTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCAttt                                                                                          <  2:1355666/140‑1 (MQ=255)

                                               cGACATTTTATCTCCTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTc                                                                                         >  2:10382530/1‑140 (MQ=255)

                                                        aTCTCCTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACt                                                                                >  2:3750985/1‑140 (MQ=255)

                                                            ccTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGc                                                                            >  2:6337170/1‑140 (MQ=255)

                                                                       tAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGc                                                                 >  1:1750821/1‑140 (MQ=255)

                                                                            tttttATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGaaa                                                            <  2:2909835/140‑1 (MQ=255)

                                                                            tttttATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGaaa                                                            >  2:2360572/1‑140 (MQ=255)

                                                                               ttATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGaaaaaa                                                         >  1:10285732/1‑140 (MQ=255)

                                                                                      tACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTAt                                                  >  1:305965/1‑140 (MQ=255)

                                                                                                  aTTTCATATTTATAATTTTCTGTTTGTTTTCATCCTTTAGAACTATTGATAATGAAATGTGTAAGATATATTGCAATGCGACCCATTTCTGAAATAATCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAgttt                                      <  2:3109035/140‑3 (MQ=255)

                                                                                                  aTTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAgtgt                                      <  1:64318/140‑1 (MQ=255)

                                                                                                   tttCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATa                                                                                  >  1:3348759/1‑95 (MQ=255)

                                                                                                   tttCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTc                                     >  1:8838173/1‑140 (MQ=255)

                                                                                                            tataATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAg                            >  2:9001816/1‑140 (MQ=255)

                                                                                                            tataATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAg                            >  1:1513131/1‑140 (MQ=255)

                                                                                                            tataATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAg                            >  1:10755314/1‑140 (MQ=255)

                                                                                                            tataATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAg                            >  1:7121198/1‑140 (MQ=255)

                                                                                                            tataATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAg                            >  2:3837480/1‑140 (MQ=255)

                                                                                                            tataATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAg                            >  1:53240/1‑140 (MQ=255)

                                                                                                             ataATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAGGTGTCAGTAATAAGa                           >  1:11381425/1‑140 (MQ=255)

                                                                                                              taATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGAc                          >  2:11322631/1‑140 (MQ=255)

                                                                                                              taATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGAc                          >  2:4039032/1‑140 (MQ=255)

                                                                                                               aaTTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACa                         >  2:10607240/1‑140 (MQ=255)

                                                                                                                 tttGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAAc                       <  2:1103752/140‑1 (MQ=255)

                                                                                                                 tttGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAAc                       >  1:1103752/1‑140 (MQ=255)

                                                                                                                   tGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCATCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCATTAATAATACAACca                     >  1:7601348/1‑140 (MQ=255)

                                                                                                                   tGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACca                     <  2:935929/140‑1 (MQ=255)

                                                                                                                   tGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACca                     >  2:11318114/1‑140 (MQ=255)

                                                                                                                   tGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACca                     <  2:1242088/140‑1 (MQ=255)

                                                                                                                   tGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACca                     >  2:1656818/1‑140 (MQ=255)

                                                                                                                   tGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACca                     >  1:4597865/1‑140 (MQ=255)

                                                                                                                   tGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACca                     >  1:5145850/1‑140 (MQ=255)

                                                                                                                   tGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACca                     >  2:268815/1‑140 (MQ=255)

                                                                                                                   tGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACca                     >  1:2464082/1‑140 (MQ=255)

                                                                                                                   tGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACca                     >  2:7473551/1‑140 (MQ=255)

                                                                                                                   tGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGGAAGTGTCAGTAATAAGACAAcaa                     >  2:8012085/1‑138 (MQ=255)

                                                                                                                    gCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGAc                          <  1:5086362/134‑1 (MQ=255)

                                                                                                                    gCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGAc                          >  2:5086362/1‑134 (MQ=255)

                                                                                                                    gCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACcac                    >  1:697092/1‑140 (MQ=255)

                                                                                                                    gCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACcac                    >  2:9628493/1‑140 (MQ=255)

                                                                                                                    gCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACcac                    >  1:5455930/1‑140 (MQ=255)

                                                                                                                    gCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACcac                    >  1:594584/1‑140 (MQ=255)

                                                                                                                    gCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACcac                    >  2:8782136/1‑140 (MQ=255)

                                                                                                                    gCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACcac                    >  2:4877190/1‑140 (MQ=255)

                                                                                                                     cTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACcaca                   >  2:674848/1‑140 (MQ=255)

                                                                                                                     cTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACcaca                   >  1:9705169/1‑140 (MQ=255)

                                                                                                                       gtttgtttTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAAt                 >  1:9565053/1‑140 (MQ=255)

                                                                                                                       gtttgtttTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAAt                 >  1:3752249/1‑140 (MQ=255)

                                                                                                                       gtttgtttTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAAt                 >  1:4119138/1‑140 (MQ=255)

                                                                                                                        tttgtttTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAAtt                >  2:9775685/1‑140 (MQ=255)

                                                                                                                        tttgtttTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAAtt                >  2:4906248/1‑140 (MQ=255)

                                                                                                                        tttgtttTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAAtt                >  2:538143/1‑140 (MQ=255)

                                                                                                                        tttgtttTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAAtt                >  2:8562677/1‑140 (MQ=255)

                                                                                                                        tttgtttTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAAtt                >  1:8654254/1‑140 (MQ=255)

                                                                                                                         ttgtttTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTg               >  1:934871/1‑140 (MQ=255)

                                                                                                                         ttgtttTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTg               >  2:10005508/1‑140 (MQ=255)

                                                                                                                          tgtttTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGc              >  1:10146289/1‑140 (MQ=255)

                                                                                                                          tgtttTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGc              >  1:5276869/1‑140 (MQ=255)

                                                                                                                           gtttTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACACTTGCa             <  2:1533079/140‑1 (MQ=255)

                                                                                                                           gtttTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCa             <  2:9688628/140‑1 (MQ=255)

                                                                                                                              ttCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGAc          <  1:4906235/140‑1 (MQ=255)

                                                                                                                                cAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACAt        >  1:22947/1‑140 (MQ=255)

                                                                                                                                  gCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCATCGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGa      >  2:4600808/1‑140 (MQ=255)

                                                                                                                                  gCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGa      >  1:5641106/1‑140 (MQ=255)

                                                                                                                                  gCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGa      >  2:7241546/1‑140 (MQ=255)

                                                                                                                                  gCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGa      >  1:6557560/1‑140 (MQ=255)

                                                                                                                                  gCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGa      >  1:7678462/1‑140 (MQ=255)

                                                                                                                                  gCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGa      >  1:785568/1‑140 (MQ=255)

                                                                                                                                  gCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGa      >  2:2224529/1‑140 (MQ=255)

                                                                                                                                  gCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGa      >  2:1449650/1‑140 (MQ=255)

                                                                                                                                  gCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGa      >  1:21202/1‑140 (MQ=255)

                                                                                                                                   ccTTGCGAACTATTGATAATGAAATGTTTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGAt     <  2:8558961/140‑1 (MQ=255)

                                                                                                                                      tGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGAt     >  1:11504031/1‑137 (MQ=255)

                                                                                                                                      tGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGATTTc  >  2:7905880/1‑140 (MQ=255)

                                                                                                                                      tGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGATTTc  >  2:5608622/1‑140 (MQ=255)

                                                                                                                                      tGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGATTTc  >  1:1200227/1‑140 (MQ=255)

                                                                                                                                      tGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGATTTc  >  2:7047320/1‑140 (MQ=255)

                                                                                                                                      tGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGATTTc  >  1:7438058/1‑140 (MQ=255)

                                                                                                                                      tGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGATTTc  >  1:8946051/1‑140 (MQ=255)

                                                                                                                                      tGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGATTTc  >  1:9535263/1‑140 (MQ=255)

                                                                                                                                      tGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGATTTc  >  2:4341874/1‑140 (MQ=255)

                                                                                                                                      tGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGATTTc  >  2:10761265/1‑140 (MQ=255)

                                                                                                                                      tGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGATTTc  >  2:11003555/1‑140 (MQ=255)

                                                                                                                                      tGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGATTTc  >  2:3463974/1‑140 (MQ=255)

                                                                                                                                      tGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGATTTc  >  2:11459731/1‑140 (MQ=255)

                                                                                                                                      tGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGATTTc  >  2:2855688/1‑140 (MQ=255)

                                                                                                                                      tGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGATTTc  >  2:1889917/1‑140 (MQ=255)

                                                                                                                                      tGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGATTTc  >  2:2515562/1‑140 (MQ=255)

                                                                                                                                      tGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGAAGACATGAttgc  >  2:11186754/1‑138 (MQ=255)

ATGTTAGCGTTGAAGGCATGATGAATAAATATAACAGAACAAACGAGCGACATTTTATCTCCTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCAAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGATTTC  >  NZ_CP025268/1588454‑1588727

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`