BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	2,169,037	A→G	241 (TAA→TAG)	baeR →	two‑component system response regulator BaeR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	2,169,037	0	A	G	100.0%	1664.0 / NA	478	241 (TAA→TAG)	baeR	two‑component system response regulator BaeR
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (210/268); total (210/268)

Only 100 of 478 total aligned reads displayed.

TAACCGACCGCACCATCGACAGCCACATTAAAAACCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGG  >  NZ_CP025268/2168901‑2169172

  accgaccgCACCATCGACAGCCACATTAAAAACCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTa                                                                                                                                         >  2:9325598/1‑140 (MQ=255)

  accgaccgCACCATCGACAGCCACATTAAAAACCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTa                                                                                                                                         >  2:2943171/1‑140 (MQ=255)

   ccgaccgCACCATCGACAGCCACATTAAAAACCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAg                                                                                                                                        >  1:935139/1‑140 (MQ=255)

   ccgaccgCACCATCGACAGCCACATTAAAAACCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAg                                                                                                                                        <  1:5557834/140‑1 (MQ=255)

     gaccgCACCATCGACAGCCACATTAAAAACCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCg                                                                                                                                      >  1:10006790/1‑140 (MQ=255)

      accgCACCATCGACAGCCACATTAAAAACCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGa                                                                                                                                     <  2:7618244/140‑1 (MQ=255)

      accgCACCATCGACAGCCACATTAAAAACCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGa                                                                                                                                     >  1:9776098/1‑140 (MQ=255)

      accgCACCATCGACAGCCACATTAAAAACCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGa                                                                                                                                     >  1:3691067/1‑140 (MQ=255)

      accgCACCATCGACAGCCACATTAAAAACCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCAATTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGAAGCCTGCCGCATCGTTTAGTTTTAGCGa                                                                                                                                     >  2:4079789/1‑140 (MQ=255)

       ccgCACCATCGACAGCCACATTAAAAACCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGAc                                                                                                                                    <  1:10175220/140‑1 (MQ=255)

        cgCACCATCGACAGCCACATTAAAAACCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACa                                                                                                                                   >  1:9010325/1‑140 (MQ=255)

        cgCACCATCGACAGCCACATTAAAAACCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACa                                                                                                                                   >  1:5731607/1‑140 (MQ=255)

          cACCATCGACAGCCACATTAAAAACCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACatt                                                                                                                                 <  1:1473297/140‑1 (MQ=255)

          cACCATCGACAGCCACATTAAAAACCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCAGTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACatt                                                                                                                                 >  1:5858311/1‑140 (MQ=255)

          cACCATCGACAGCCACATTAAAAACCTGCGCCGCAAGCTGGAATCTCTCGACGCCCAACAGTCATTTATCCGCGCCGGTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACatt                                                                                                                                 >  1:10324005/1‑140 (MQ=255)

              aTCGACAGCAACATTAAAAACCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTAAGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACAGTAttt                                                                                                                             >  2:10745240/1‑140 (MQ=255)

               tCGACAGCCACATTAAAAACCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTAtttt                                                                                                                            <  1:2676514/140‑1 (MQ=255)

                 gACAGCCACATTAAACACCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGt                                                                                                                          <  2:5229738/140‑1 (MQ=255)

                   cAGCCACATTAAAAACCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTa                                                                                                                        <  1:9713557/140‑1 (MQ=255)

                   cAGCCACATTAAAAACCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTa                                                                                                                        <  2:6404476/140‑1 (MQ=255)

                      ccACATTAAAAACCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGcc                                                                                                                     >  1:3885462/1‑140 (MQ=255)

                       cacaTTAAAAACCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAg                                                                                                                                        >  1:1984585/1‑120 (MQ=255)

                       cacaTTAAAAACCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCg                                                                                                                    >  2:3641331/1‑140 (MQ=255)

                         caTTAAAAACCTGCGCCGCTAGCTGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGga                                                                                                                  >  2:8413815/1‑140 (MQ=255)

                            tAAAAACCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGAt                                                                                                               >  1:7338853/1‑140 (MQ=255)

                             caaacCCTGCGCCGCAAGCTGGAATCTCACGACGCCGAACCGTCATTTATCCGCGCCGTTGATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATg                                                                                                              <  2:7529239/139‑1 (MQ=255)

                             aaaaaCCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATg                                                                                                              <  2:774436/140‑1 (MQ=255)

                             aaaaaCCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATg                                                                                                              >  2:463709/1‑140 (MQ=255)

                                  ccTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGtt                                                                                                         <  1:7044956/140‑1 (MQ=255)

                                  ccTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGtt                                                                                                         <  1:1389678/140‑1 (MQ=255)

                                    tGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGCGATGGCGTT‑‑‑‑‑Ca                                                                                                  >  2:272417/1‑140 (MQ=255)

                                    tGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑Ca                                                                                                  >  2:820739/1‑140 (MQ=255)

                                    tGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑Ca                                                                                                  >  2:8973952/1‑140 (MQ=255)

                                     gcgcCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAg                                                                                                 >  2:3933396/1‑140 (MQ=255)

                                     gcgcCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAg                                                                                                 <  2:3537202/140‑1 (MQ=255)

                                      cgccgcAAGCTGGAATCTCTCGACGCCGAACAGTCCTTTATCCGCGCCGTGTATGGCGTCGGTTACCGCGGGGCAGCCGACGCCTGCCGCAGCGTTTAGTTGTAGCGACATGATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAgc                                                                                                >  2:8351559/1‑139 (MQ=255)

                                      cgccgcAAGCTGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGa                                                                                                >  1:5187591/1‑140 (MQ=255)

                                      cgccgcAAGCTGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGa                                                                                                >  1:1554360/1‑140 (MQ=255)

                                      cgccgcAAGCTGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGGT‑‑‑‑‑CAGa                                                                                                >  1:2991971/1‑140 (MQ=255)

                                       gccgcAAGCTGGAATCTCTCGACGCCGAACAGTCATGTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGAc                                                                                               <  2:6930541/140‑1 (MQ=255)

                                                tGGACTCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCgg                                                                                      <  1:4755172/140‑1 (MQ=255)

                                                tGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCgg                                                                                      <  1:6853630/140‑1 (MQ=255)

                                                tGGAATCTCTCGACGCCGAACAGTCATGTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCgg                                                                                      <  2:11006370/140‑1 (MQ=255)

                                                    ctcactcGACGCCGATCAGTCATTTGTGCGCGCCGTTTAATTCGTCGGTTACCGCGGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAAc                                                                                  <  2:7873113/136‑1 (MQ=255)

                                                     tctctcGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACa                                                                                 <  2:5449462/140‑1 (MQ=255)

                                                     tctctcGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACa                                                                                 <  2:9860886/140‑1 (MQ=255)

                                                     tctctcGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACa                                                                                 <  1:10536270/140‑1 (MQ=255)

                                                     tctctcGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACa                                                                                 <  1:8716507/140‑1 (MQ=255)

                                                      ctctcGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACAt                                                                                <  1:11479946/140‑1 (MQ=255)

                                                       tctcGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACAtt                                                                               >  2:1394704/1‑140 (MQ=255)

                                                        ctcGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTa                                                                              >  2:10085476/1‑140 (MQ=255)

                                                         tcGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTAt                                                                             >  2:478748/1‑140 (MQ=255)

                                                         tcGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTAt                                                                             <  2:124364/140‑1 (MQ=255)

                                                          cGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATc                                                                            >  1:6394445/1‑140 (MQ=255)

                                                                cGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGc                                                                      <  2:5931764/140‑1 (MQ=255)

                                                                  aaCAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCAt                                                                    <  2:1760521/140‑1 (MQ=255)

                                                                      gTCATTTATCCGCGCCGTTTAGGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTc                                                                <  1:5976380/140‑1 (MQ=255)

                                                                       tCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCa                                                               >  1:924893/1‑140 (MQ=255)

                                                                       tCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCa                                                               >  1:562518/1‑140 (MQ=255)

                                                                            tATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCaaa                                                          <  1:2468815/140‑1 (MQ=255)

                                                                            tATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCaaa                                                          >  1:10991192/1‑140 (MQ=255)

                                                                                cgcgCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGa                                                      <  2:8616656/140‑1 (MQ=255)

                                                                                 gcgcCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTa                                                                              <  1:3177457/115‑1 (MQ=255)

                                                                                 gcgcCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGAc                                                     >  1:2255157/1‑140 (MQ=255)

                                                                                 gcgcCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGAc                                                     >  1:3416724/1‑140 (MQ=255)

                                                                                 gcgcCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGAc                                                     >  1:6503642/1‑140 (MQ=255)

                                                                                   gcCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACCTTAGTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCACACGCATGGTCAGCAACCTGACAt                                                   >  2:11204157/1‑140 (MQ=255)

                                                                                    ccGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACAtt                                                  >  2:10462016/1‑140 (MQ=255)

                                                                                    cagTTTATGGCGTCGGTTACCGCTGTGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACAtt                                                  <  2:6691615/138‑1 (MQ=255)

                                                                                          aTGGCGTCGGTTACCGCTGGGAAGCCNACGCCTGNCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTNAGCAAACTGACATTAtctct                                            <  1:6106480/140‑1 (MQ=255)

                                                                                          aTGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTAtctct                                            <  1:4541850/140‑1 (MQ=255)

                                                                                          aTGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTAtctct                                            <  1:4897893/140‑1 (MQ=255)

                                                                                               gTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGcc                                       >  1:1172018/1‑140 (MQ=255)

                                                                                                 cGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCt                                     >  1:10720105/1‑140 (MQ=255)

                                                                                                 cGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCt                                     >  1:5361178/1‑140 (MQ=255)

                                                                                                 cGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCt                                     >  1:28560/1‑140 (MQ=255)

                                                                                                 cGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCt                                     >  1:8436375/1‑140 (MQ=255)

                                                                                                 cGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCt                                     >  1:11248099/1‑140 (MQ=255)

                                                                                                     tACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTggca                                 <  2:2522293/140‑1 (MQ=255)

                                                                                                       ccGCTGGGAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCCCGCATGGTCAGCTAACTGACATTATCTCTCCGCCCTggcagg                               <  2:5065975/140‑1 (MQ=255)

                                                                                                       ccGCTGGGAACCCGACGCCTGCCGCATCGTTTAGTATTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTggcagg                               <  2:9052805/140‑1 (MQ=255)

                                                                                                              gAAGCCGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGa                        >  1:3961350/1‑140 (MQ=255)

                                                                                                                  ccGACGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAAt                    >  2:6206599/1‑140 (MQ=255)

                                                                                                                     aCGCCTGCCGCATCGGTTAGTTTTAGCGACCTTATTTTGTTAGCCGGAGATGGCGTG‑‑‑‑‑AAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGc                 >  1:7938513/1‑140 (MQ=255)

                                                                                                                      cGCCTGCCGCATCGTTTAGTTTTAGCGACATTATTGTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCt                <  2:1147247/140‑1 (MQ=255)

                                                                                                                       gCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTc               <  1:7689342/140‑1 (MQ=255)

                                                                                                                       gCCTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTc               <  2:2057116/140‑1 (MQ=255)

                                                                                                                        ccTGCCGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCa              <  2:228666/140‑1 (MQ=255)

                                                                                                                            ccGCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTTCAGACCAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTc               <  2:3172853/140‑1 (MQ=255)

                                                                                                                            ccGCATCGTTTAGTTTTAGCGACAGTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACt          <  2:8062428/140‑1 (MQ=255)

                                                                                                                              gCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAACATCGCTCATACttt        <  2:217810/140‑1 (MQ=255)

                                                                                                                              gCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACttt        <  1:4218864/140‑1 (MQ=255)

                                                                                                                              gCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACttt        <  1:1638252/140‑1 (MQ=255)

                                                                                                                              gCATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACttt        <  1:8089877/140‑1 (MQ=255)

                                                                                                                              gCATCGTTTAGTTTTAGCGACATTATTTTGTGAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTTACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACttt        <  2:561318/140‑1 (MQ=255)

                                                                                                                               cATCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTa       >  2:3758054/1‑140 (MQ=255)

                                                                                                                                 tCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAAt     <  2:1082892/140‑1 (MQ=255)

                                                                                                                                 tCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAAt     <  1:9897061/140‑1 (MQ=255)

                                                                                                                                 tCGTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAAt     <  2:5711641/140‑1 (MQ=255)

                                                                                                                                   gTTTAGTTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCg   <  2:9714960/140‑1 (MQ=255)

TAACCGACCGCACCATCGACAGCCACATTAAAAACCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAATTTTAGCGACATTATTTTGTTAGCCGGAGATGGCGTT‑‑‑‑‑CAGACCAGATCCGGCAACATTATCCCACGCATGGTCAGCAAACTGACATTATCTCTCCGCCCTGGCAGGCATCAGAAAATCGCTCATACTTTAATCGG  >  NZ_CP025268/2168901‑2169172

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`