BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	4,608,154	G→A	noncoding (48/87 nt)	CXP41_RS23870 ←	tRNA‑Leu

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	4,608,154	0	G	A	97.7%	1597.7 / ‑5.0	482	noncoding (48/87 nt)	CXP41_RS23870	tRNA‑Leu
Reads supporting (aligned to +/- strand): ref base G (1/2); major base A (243/221); minor base T (8/3); total (252/230)
Fisher's exact test for biased strand distribution p-value = 2.30e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 483 total aligned reads displayed.

CCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAG  >  NZ_CP025268/4608017‑4608289

    cACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTa                                                                                                                                   <  1:815857/140‑1 (MQ=255)

    cACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGACATCTTACTTTTTTTGATATCGACTCGATTTGTGCGA‑GGGGGGGGACTTGCACCACCACGTCCGTACGAACACTa                                                                                                                                   >  2:2750782/1‑140 (MQ=25)

     aCGTCCTTAAGGACACTAACACCTGAAGCTAGAGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTaa                                                                                                                                  <  2:8381827/140‑1 (MQ=255)

     aCGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTaa                                                                                                                                  >  2:5544290/1‑140 (MQ=255)

      cGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCTTCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTaa                                                                                                                                  <  1:2260100/140‑1 (MQ=255)

        tCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTa                                                                                                                                   >  1:3476824/1‑136 (MQ=255)

            tAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGa                                                                                                                           >  2:3624460/1‑140 (MQ=255)

            tAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGACTCGTTTGGTGCGA‑GGGGGGGGAATTGAACCCCCACGTCCGTAAGAACACTAACACCTGa                                                                                                                           >  1:76358/1‑140 (MQ=255)

                 acacTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTa                                                                                                                      >  1:10919079/1‑140 (MQ=255)

                  cacTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAg                                                                                                                     >  2:8161005/1‑140 (MQ=255)

                   acTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAgc                                                                                                                    >  1:11342429/1‑140 (MQ=255)

                   acTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTGTGGTGCGA‑GGGGGGGGTCTTGTACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAgc                                                                                                                    >  1:9328626/1‑140 (MQ=255)

                   acTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGACTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAgc                                                                                                                    >  2:7676330/1‑140 (MQ=255)

                      aaCACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGcgcg                                                                                                                 <  1:6727663/140‑1 (MQ=255)

                      aaCACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTAATTAGATATCGACACGTTTGGTGCGA‑GGGGGGGGACTTTAACCCCCACGTCCGTAAGAACACTAACACCTGAATCTAGcgcg                                                                                                                 >  2:4545018/1‑140 (MQ=25)

                          ccTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCTCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTa                                                                                                             <  2:2181830/140‑1 (MQ=255)

                            tGAAGCTAGCGCGACTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTGCGTAAGAAAAATAACACCTGAAGCTAGCGCGTCTAcc                                                                                                           >  1:6130438/1‑140 (MQ=37)

                             gAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCa                                                                                                          <  1:3012850/140‑1 (MQ=255)

                             gAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCa                                                                                                          >  1:9029323/1‑140 (MQ=255)

                             gAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCa                                                                                                          >  1:4540167/1‑140 (MQ=255)

                               aGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGACTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAAt                                                                                                        >  1:733171/1‑140 (MQ=255)

                                   aGCGCGTCTACCATTTCCGCCTCCTGCGCACCGTCATCTTTCTTTTTTTGTGTTCGCGTCGGTTGGTGCGA‑GGGGGGGGACTTGAACCGCCACGTGCGTAAGTTCACTATGACCTGTAGCTAGCGCGTCTGCCAATTGCg                                                                                                    >  2:918266/1‑140 (MQ=16)

                                   aGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGTGACTTGAACCCCCACGTCCGTAACAACACTAACACCTGAAGCTATCGCGTCTACCAATTCCg                                                                                                    >  1:3194502/1‑140 (MQ=255)

                                   aGCGCGTCTACCAATTCCGCCACCTTCGCACACACAACTTACTTTTTTTGATATCGAATCGTTTGGGGCGA‑GGGGGGGGACTTGCACCAACACGTCCGTAATAACACTAACACATTAAGCTAGCTCGTCTCCCAAATCCg                                                                                                    >  2:7112301/1‑140 (MQ=21)

                                    gctcttCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGc                                                                                                   <  1:6511003/135‑1 (MQ=255)

                                    gcgcGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGc                                                                                                   <  2:1157595/140‑1 (MQ=255)

                                    gcgcGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTAGGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGc                                                                                                   <  2:5236090/140‑1 (MQ=255)

                                     cgcgTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGcc                                                                                                  >  1:5852345/1‑140 (MQ=255)

                                        gTCTACCAATTCCGCCACCTTCGCCCAGTCATCTTACTTTTTTTGATATCGCCTCTTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCTTCTACCAATTCCGCCAcc                                                                                               <  1:406585/140‑1 (MQ=255)

                                        gTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCAcc                                                                                               >  1:9602396/1‑140 (MQ=255)

                                            aCCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCg                                                                                           <  1:5544290/140‑1 (MQ=255)

                                             ccAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGT‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGc                                                                                          <  1:7965015/140‑1 (MQ=255)

                                             ccAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGc                                                                                          <  1:4775492/140‑1 (MQ=255)

                                              ctcttCCGACACCTTATCACAGTCATCTTACTTTTTTTGATTTCGACTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGcc                                                                                         <  1:5071563/137‑1 (MQ=18)

                                              cacttCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCTTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGcc                                                                                         <  2:9619293/137‑1 (MQ=255)

                                              cacgtCCGCCCCCTCCGCACAGCCATCTTACTTTACTGGATAGCGCCTCGTTTGGTGCGA‑GGGGGGGGACTAGAACCCCCACGTCCGTACGCACACCACCACCTGACGCTAGCGCGTCTCCCCCTTCCGCCACCAGCGcc                                                                                         <  2:1873396/136‑1 (MQ=12)

                                              cAATTCCGCCACCTTCGCACATTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGcc                                                                                         <  2:938009/140‑1 (MQ=255)

                                              cAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGcc                                                                                         <  2:2460418/140‑1 (MQ=255)

                                              cAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGcc                                                                                         <  1:11201375/140‑1 (MQ=255)

                                              cAAGTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGcc                                                                                         <  1:11006476/140‑1 (MQ=255)

                                               aaTTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGccc                                                                                        >  1:9890595/1‑140 (MQ=255)

                                               aaTTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGccc                                                                                        <  1:4122556/140‑1 (MQ=255)

                                                 ttCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGAGTTGAACCCCCACGTCCGTAAGAACACTAACACCTGTAGCTAGCGCGTGTACCAATTCCGCCACCTTCGcccgg                                                                                      >  1:2485991/1‑138 (MQ=21)

                                                 ttCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAg                                                                                      >  1:268537/1‑140 (MQ=255)

                                                  cccGCAACCTACGCACATTCATCTTACTTTTATTTATATCGCCACTTTTGGTGCTT‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGt                                                                                     <  1:10017927/139‑1 (MQ=17)

                                                   ccGCCACCTTCGCACAGTCATGTTACTATTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTg                                                                                    <  2:4768250/140‑1 (MQ=255)

                                                   ccGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTTGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTATGTACACAAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCAACTTCGcaatcgg                                                                                    >  2:8006110/1‑134 (MQ=21)

                                                   ccGCCACCATATCACAGTCAACTTACTATATTTGATCTATCCTCTATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTg                                                                                    <  1:2408037/140‑1 (MQ=14)

                                                     gCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCg                                                                                  >  1:6262349/1‑140 (MQ=255)

                                                      ccACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGa                                                                                 >  1:3749712/1‑140 (MQ=255)

                                                       cACCTTCGCACAGTCATCTTACTTTTTTTGATCTCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAg                                                                                <  1:8847768/140‑1 (MQ=255)

                                                       cACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCg                                                                                  >  2:891265/1‑138 (MQ=255)

                                                       cACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAg                                                                                <  2:10152445/140‑1 (MQ=255)

                                                        aCCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGGGCGAga                                                                               >  2:10718589/1‑139 (MQ=255)

                                                          cTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCaa                                                                             <  2:6465222/140‑1 (MQ=255)

                                                           ttCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAat                                                                            >  1:8316011/1‑140 (MQ=255)

                                                           ttCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAat                                                                            >  1:10545390/1‑140 (MQ=255)

                                                             cGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCActat                                                                          >  1:1884866/1‑140 (MQ=255)

                                                              gCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATc                                                                         <  1:8502404/140‑1 (MQ=255)

                                                                    tCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTg                                                                   >  2:1088968/1‑140 (MQ=255)

                                                                    tCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCGAGCGCGTCTACCAATTCCGCCACCTTCGCAAAGGTAGAACACTATCAACgaa                                                                   >  2:4953534/1‑138 (MQ=17)

                                                                    tCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACAAACACCTGAAGCTAGCGCGTCTACCAATTCCGCAACCTTCGCCCAGTGAGAGAAATATCAACTTg                                                                   >  2:3189004/1‑140 (MQ=18)

                                                                     cATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTgg                                                                  <  1:9227584/140‑1 (MQ=255)

                                                                      aTCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCTCCCAGAGACAGCAATAACAACGAGGt                                                                 >  2:7782423/1‑140 (MQ=18)

                                                                       tCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGAGCGAGCAATATCAACGAGGtt                                                                >  2:1463626/1‑140 (MQ=255)

                                                                            cTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTgg                                                           >  1:2068691/1‑140 (MQ=255)

                                                                            cTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTgg                                                           <  2:3304244/140‑1 (MQ=255)

                                                                              ttttttGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGACCCCCCCCGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCACTATCAACGTGGTTTTTGGTg                                                         >  2:7933751/1‑140 (MQ=255)

                                                                              ttttttGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCACTATCAACGTGGTTTTTGGTg                                                         >  2:4187584/1‑140 (MQ=255)

                                                                              ttttttGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTg                                                         >  1:10200758/1‑140 (MQ=255)

                                                                              ttttttGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTg                                                         >  1:7721115/1‑140 (MQ=255)

                                                                              ttttttGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTg                                                         >  1:9752638/1‑140 (MQ=255)

                                                                              ttttttGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTg                                                         >  2:10311791/1‑140 (MQ=255)

                                                                              tgttttGATATCGCCTCGTTTGGGGCGA‑GGGGGGGGTCTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGAGAGTCTAGCACTTGCGCCCCCTTCGCCCAGTGCGAGACATATCATCGTGGGTTTTGGTg                                                         >  2:6835696/3‑140 (MQ=18)

                                                                                ttttGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCg                                                       <  1:5380753/140‑1 (MQ=255)

                                                                                atttGATATCTCCTCTTTTGGTGCGT‑GGGGGTGGACTTGAACCCCCACTTCCGTAAGAACACTTACAGCTGAAGCTAGCGCGTCTACCAAGTCCGACACCTTCGCCCTGTTCGAGCAATATCAACGTGTTTTTTGGTGCg                                                       <  2:9521118/139‑1 (MQ=18)

                                                                                   tGATATAGCCTCGTGTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTATCGCGTCTACCAATTACGCCACCTTCGCCCAGTGCTAGCAAGATCAACGTGCTTTTTGGTGCGAgg                                                    <  2:9839837/140‑1 (MQ=18)

                                                                                        tCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAAGTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAggggggg                                               <  1:3914558/140‑1 (MQ=255)

                                                                                           cgtCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGACCACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGAc                                            <  2:613721/138‑1 (MQ=255)

                                                                                             tCGTTTGGTGCGC‑GGGGTGGGACTTGACCCCCCACGTCCGTACGAACACTCACACCTGAATCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGATGTGGGGGACtt                                          <  2:3461224/140‑1 (MQ=21)

                                                                                                tttGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGAGCGAGCAATATCAACGAGGTTTTTGGTGCGAGGGGGGGGACTTGaa                                       >  2:3851140/1‑140 (MQ=255)

                                                                                                     tGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGATccccc                                  >  1:1709769/1‑140 (MQ=255)

                                                                                                     tGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAAccccc                                  >  2:2788022/1‑140 (MQ=255)

                                                                                                      gCGT‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAATCTAGCTCGTCTACCTTGTCCTCAACCTTCGCCCAGTGCGAGAAATTTCAACGTGTTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCa                                 <  2:1591497/140‑1 (MQ=21)

                                                                                                      gCGA‑GGGGGTGGACTTGAACCCCCACGTCCGTAAGAACACTACCACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGAAATAACAACGTGGATTTTGGTGCGAGGGGGGGGACTTGAACCCCCa                                 <  1:10320349/140‑1 (MQ=21)

                                                                                                         a‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGAGCGAGCACTATCAACGTCTTTTTACCTGCGAGGGGCGGGCCTGGAAACCCCAcct                              >  2:7332689/1‑138 (MQ=17)

                                                                                                           ggggggggACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTc                             >  1:5225476/1‑140 (MQ=255)

                                                                                                              gggggACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGt                          >  2:2014312/1‑140 (MQ=255)

                                                                                                               ggggACTTGCACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTa                         <  1:3302013/140‑1 (MQ=255)

                                                                                                                 ggACTTGAACCCCCTCGTCCTTAAGAACACGAACACATGAAGCTAACGCGACTACCAATACCGCCACCTTAGCCCAGTCCTATAAATATAAACGAGGTATATGGTGCGAGTGGGGGGAATTGAACCCCCACGTCCGTTAg                       <  2:4039984/140‑1 (MQ=12)

                                                                                                                 ggACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATACCGCCACCCTCGCCCAGTGCGAGCAATATCAAAGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAg                       <  2:5314504/140‑1 (MQ=255)

                                                                                                                     ttGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAg                       <  2:11290986/136‑1 (MQ=255)

                                                                                                                       gAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCACTATCAACGTGGTGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACt                 >  2:4352914/1‑140 (MQ=255)

                                                                                                                       gAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACt                 >  1:6786876/1‑140 (MQ=255)

                                                                                                                       gAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACt                 >  1:1323583/1‑140 (MQ=255)

                                                                                                                        accccccACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTATACCAATTCCGCCACCTTCGCCCCGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTa                <  1:7132583/138‑1 (MQ=255)

                                                                                                                         aCCCCCACTTCCTTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCATTGCGAGCAATATAAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTaa               <  1:11603761/140‑1 (MQ=25)

                                                                                                                             ccACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGCCTTGAACCCCCACGTCCGTAAGGACACTAACAcc           >  2:5069643/1‑140 (MQ=255)

                                                                                                                             ccACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACAcc           >  2:5822039/1‑140 (MQ=255)

                                                                                                                               aCGTCCTTAAGTAAACTTACACATGAATCTTTATCGTCTACATATACCGCCACCTTAGCCCAGTGCGAGAAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTg         <  2:2962019/140‑1 (MQ=18)

CCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAG  >  NZ_CP025268/4608017‑4608289

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`