BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	383,110	T→C	pseudogene (558/672 nt)	CXP41_RS01990 ←	PIG‑L family deacetylase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	383,110	0	T	C	99.8%	1432.4 / NA	430	pseudogene (558/672 nt)	CXP41_RS01990	PIG‑L family deacetylase
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (250/179); minor base A (0/1); total (250/180)
Fisher's exact test for biased strand distribution p-value = 4.19e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 430 total aligned reads displayed.

TCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCTTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCGAGAATTTGCGGAATAGTTCGGCAGG  >  NZ_CP025268/382974‑383246

tCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAg                                                                                                                                       >  1:836226/1‑140 (MQ=255)

   aGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCtt                                                                                                                                    >  1:7713800/1‑140 (MQ=255)

   aGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCtt                                                                                                                                    >  1:11548760/1‑140 (MQ=255)

   aGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCtt                                                                                                                                    >  2:96817/1‑140 (MQ=255)

   aGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCtt                                                                                                                                    >  2:5067671/1‑140 (MQ=255)

   aGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCtt                                                                                                                                    >  1:2305218/1‑140 (MQ=255)

   aGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCAAGCtt                                                                                                                                    >  1:5846446/1‑140 (MQ=255)

   aGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAGATAGCTATTGACATGTTTTCCGCTAAAATGTGCAACTGCACTCAGTCGATCAAGACGCATATAATCGCGTCGATCCTATCtg                                                                                                                                    >  2:8022142/1‑139 (MQ=255)

        ttCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATg                                                                                                                               >  2:1383163/1‑140 (MQ=255)

        ttCATGCAAGTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATg                                                                                                                               >  1:9443346/1‑140 (MQ=255)

         tCATGCAATTTTCTCAAAGCAACATTTTATGATTAACACACCATTCAACCAGATCGCTATTGACCTGTTGGCCGCTAAAATGTGCAACTGCACGCAGGCGATCATGACGCATATACTCGCGTCGTTGCTAGCTTTTATGt                                                                                                                              <  2:8785545/140‑1 (MQ=255)

         tCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGt                                                                                                                              <  2:3695879/140‑1 (MQ=255)

         tCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGt                                                                                                                              <  1:10700305/140‑1 (MQ=255)

                aTTAGCACAAAGAAACATTTTAAGAATTACACAGCCTTCACCCAGATCGCGATTGACCTGTTGTCCTCGAAATTGTGCAACTGCACGCCGGCGATCATGACGCATATAAGCGCGTCGTTCCTAGCTTTTATGTTTTTTTa                                                                                                                       <  2:2720474/140‑1 (MQ=255)

                 tttGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCTTATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTaa                                                                                                                      <  1:5261588/140‑1 (MQ=255)

                     cTCAAAGACTCATTTTATGAATTACACAGCCTTCACCCAGATCGCTATTGCCCTGTTGTCCGCGATATTGTGCAACTGCACTCAGGCTATCATGACGCATATAATCGCGTCGTTCCGATCTTTTATGTTTTTTTAATgca                                                                                                                  <  2:7707998/140‑1 (MQ=255)

                     cTCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATgca                                                                                                                  <  2:8155416/140‑1 (MQ=255)

                       cAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATgcagc                                                                                                                <  1:1107588/140‑1 (MQ=255)

                       cAAAGAATCATTTGATGAATTACAAAGCCTTCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATgcagc                                                                                                                <  1:9966950/140‑1 (MQ=255)

                             aTCATTTTATGAATTACAAAGCCTTCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGttt                                                                                                          <  1:11307478/140‑1 (MQ=255)

                                 ttttATGAATTACAAAGCCTTCACCCAGATCGCTATTGACCTGTTGTCCGCGAATTTGTGCAACTGCACGCAGGCGATCATGACGCATAGAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACt                                                                                                      <  2:4669006/140‑1 (MQ=255)

                                 ttttATGAATTACAAAGCCTTCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACt                                                                                                      <  1:4155653/140‑1 (MQ=255)

                                  gttATGAATGACAAAGCCTTCACCCAGATCGCAATTGACCTGTTCTCCGAGAAATTGTGCACCTGCACGCAGGCGATCATGTCGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCTAGTTTGACtg                                                                                                     <  2:10499769/139‑1 (MQ=255)

                                    tATGAATTACAAAGCCTTCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAAGCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACtgtg                                                                                                   <  2:1717107/140‑1 (MQ=255)

                                    caTGAATTACAAAGCCTACACCCAGATCGCTATTGACCTGTAGTCCGCGAAATTGTGCAACGGCACGCAGGCGAACAAGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTGAATGCAGCAAGTTTGACtgtg                                                                                                   <  2:10367367/139‑1 (MQ=255)

                                      tGAATTACAAAGCCTTCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGaa                                                                                                 >  1:4325986/1‑140 (MQ=255)

                                      tGAATTACAAAGCCTTCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGaa                                                                                                 >  1:2423770/1‑140 (MQ=255)

                                       gAATTACAAAGCCGTCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGaaa                                                                                                <  2:9119514/140‑1 (MQ=255)

                                          ttACAAAGCCTTCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAatat                                                                                             <  1:358061/140‑1 (MQ=255)

                                          ttACAAAGCCTTCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAatat                                                                                             >  2:4851905/1‑140 (MQ=255)

                                           tACAAAGCCTTCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATAtt                                                                                            >  2:10768444/1‑140 (MQ=255)

                                           tACAAAGCCTTCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATAtt                                                                                            >  2:4350556/1‑140 (MQ=255)

                                                aGCCTTCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCATGCGATCATGACGCATATAATCGCGTCGTTCCTAGCGTGTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATtcttct                                                                                       >  2:3460748/1‑140 (MQ=255)

                                                  ccTTCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCttt                                                                                     >  1:6074696/1‑140 (MQ=255)

                                                    ttCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACt                                                                                                      >  1:7209440/1‑121 (MQ=255)

                                                    ttCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTaa                                                                                   >  1:6467077/1‑140 (MQ=255)

                                                    ttCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTaa                                                                                   <  2:5413340/140‑1 (MQ=255)

                                                     tCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGAGAAATATTCTTCTTTAAc                                                                                  >  2:2309869/1‑140 (MQ=255)

                                                      cACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACg                                                                                 >  1:2220819/1‑140 (MQ=255)

                                                       aCCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATATTCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGAATGTGAAATATTCTTCTTTAACgg                                                                                <  1:1113997/140‑1 (MQ=255)

                                                       aCCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACgg                                                                                <  2:7281912/140‑1 (MQ=255)

                                                       aCCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACgg                                                                                <  2:4029743/140‑1 (MQ=255)

                                                       aCCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACgg                                                                                >  1:4058548/1‑140 (MQ=255)

                                                            gATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCa                                                                           >  1:7491643/1‑140 (MQ=255)

                                                            gATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCa                                                                           >  1:2866833/1‑140 (MQ=255)

                                                            gATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCa                                                                           >  2:6382196/1‑140 (MQ=255)

                                                            gATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACGGTGAAATATTCTTCTTTAACGGATTCa                                                                           >  1:6275685/1‑140 (MQ=255)

                                                            gATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTGTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCa                                                                           >  1:7334769/1‑140 (MQ=255)

                                                             aTCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTGTAACGGAGTCaa                                                                          >  1:8959334/1‑140 (MQ=255)

                                                                 cTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCTCGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTGTTCTTTAAGGGATTCAAAAAc                                                                      >  1:6309007/1‑140 (MQ=255)

                                                                 cTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAAc                                                                      >  1:53379/1‑140 (MQ=255)

                                                                 cTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAAc                                                                      <  2:831556/140‑1 (MQ=255)

                                                                 cTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTGTAATGCAGCAAGTCTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAAc                                                                      >  1:50553/1‑140 (MQ=255)

                                                                    ttGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTg                                                                   <  1:5583607/140‑1 (MQ=255)

                                                                    ttGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTg                                                                   <  2:7606666/140‑1 (MQ=255)

                                                                       aCCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGAGGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGTAATATTCTTCTTTAACGGATTCAAAAACCTGAgg                                                                >  2:8527309/1‑140 (MQ=255)

                                                                       aCCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTGTATGTTTTGTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAgg                                                                >  2:978789/1‑140 (MQ=255)

                                                                         cTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCa                                                              >  1:1990267/1‑140 (MQ=255)

                                                                          tgttgtCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTATCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCAt                                                             <  2:9307395/140‑1 (MQ=255)

                                                                          tgttgtCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCAt                                                             <  2:5619787/140‑1 (MQ=255)

                                                                            ttgtCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAATCCTGAGGCATaa                                                           >  2:5283231/1‑140 (MQ=255)

                                                                            ttgtCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATaa                                                           >  1:10088525/1‑140 (MQ=255)

                                                                            ttgtCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATaa                                                           >  2:7157184/1‑140 (MQ=255)

                                                                            ttgtCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATaa                                                           >  1:8620780/1‑140 (MQ=255)

                                                                            ttgtCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATaa                                                           >  1:8202317/1‑140 (MQ=255)

                                                                            ttgtCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATaa                                                           >  1:4866073/1‑140 (MQ=255)

                                                                            ttgtCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATaa                                                           >  1:10511439/1‑140 (MQ=255)

                                                                                 cgcgAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGaa                                                      >  1:9030829/1‑140 (MQ=255)

                                                                                 cgcgAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGaa                                                      >  1:6658150/1‑140 (MQ=255)

                                                                                     aaaTTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTACTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGcc                                                  <  1:10203485/140‑1 (MQ=255)

                                                                                      aaTTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCa                                                 <  1:4217562/140‑1 (MQ=255)

                                                                                           tgCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTAc                                            >  1:2997225/1‑140 (MQ=255)

                                                                                           tgCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTAc                                            >  1:9193697/1‑140 (MQ=255)

                                                                                            gCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACt                                           <  2:3074695/140‑1 (MQ=255)

                                                                                               aCTGCACGCAGGCGATCATGACGCATATAAGCGCGTCGGTCCTAGCTTTTATGTTTTTTTAATGCAGCCAGTTTGACTGTGAAATATTCTTCTTTACCGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTgg                                        <  2:3246792/140‑1 (MQ=255)

                                                                                                   cACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGtt                                    >  1:3115651/1‑140 (MQ=255)

                                                                                                   cACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGtt                                    >  2:2446227/1‑140 (MQ=255)

                                                                                                      gCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCg                                 <  2:38107/140‑1 (MQ=255)

                                                                                                        aGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGTCTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTa                               >  1:3454211/1‑140 (MQ=255)

                                                                                                               cATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCgaga                        <  1:122964/140‑1 (MQ=255)

                                                                                                                    cGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAATAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTCGCCGAGAATTTg                   >  2:11076690/1‑140 (MQ=255)

                                                                                                                    cGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCGAGAATTTg                   <  2:6879364/140‑1 (MQ=255)

                                                                                                                    cGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCGAGAATTTg                   >  1:9800167/1‑140 (MQ=255)

                                                                                                                    cGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCGAGAATTTg                   >  1:7970181/1‑140 (MQ=255)

                                                                                                                      cATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCGAGAATTTGCg                 >  2:1567350/1‑140 (MQ=255)

                                                                                                                      cATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGGAGCCGAGAATTTGCg                 >  1:4457964/1‑140 (MQ=255)

                                                                                                                       atatAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCGAGAATTTGCgg                <  2:598405/140‑1 (MQ=255)

                                                                                                                        tataATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCGAGAATTTGCGGa               >  2:11309434/1‑140 (MQ=255)

                                                                                                                        tataATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCGAGAATTTGCGGa               >  2:994295/1‑140 (MQ=255)

                                                                                                                        tataATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCGAGAATTTGAGGa               >  2:6136220/1‑140 (MQ=255)

                                                                                                                            ctCGCGTCGTTCCTAGCTATTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCGAGAATTTGCGGAATAg           <  2:448761/139‑1 (MQ=255)

                                                                                                                             tCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCa                                                              >  2:4551472/1‑88 (MQ=255)

                                                                                                                             tCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCCGGTACTTGGGGTTTCGTAGCCGAGAATTTGCGGAATAGt          >  2:5189139/1‑140 (MQ=255)

                                                                                                                              cgcgTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCGAGAATTTGCGGAATAGtt         >  2:7896099/1‑140 (MQ=255)

                                                                                                                               gcgTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTg                                                                   <  1:3076127/81‑1 (MQ=255)

                                                                                                                                cgtcgtTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCGAGAATTTGCGGAATAGTTCg       <  1:6853296/140‑1 (MQ=255)

                                                                                                                                 gtcgtTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCGAGAATTTGCGGAATAGTTCgg      >  2:1145383/1‑140 (MQ=255)

                                                                                                                                  tcgtTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCGAGAATTTGCGGAATAGTTCggc     >  2:3339243/1‑140 (MQ=255)

                                                                                                                                   cgtTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCGAGAATTTGCGGAATAGTTCggca    >  2:4217090/1‑140 (MQ=255)

                                                                                                                                     ttCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCGAGAATTTGCGGAATAGTTCggcagg  >  1:1586836/1‑140 (MQ=255)

TCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCTTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCGAGAATTTGCGGAATAGTTCGGCAGG  >  NZ_CP025268/382974‑383246

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`