| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,374,862 | (T)8→9 | intergenic (+40/‑172) | pspE → / → ycjM | thiosulfate sulfurtransferase PspE/glucosylglycerate phosphorylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,374,854 | 1 | . | T | 91.8% | 1755.1 / 154.9 | 599 | intergenic (+32/‑180) | pspE/ycjM | thiosulfate sulfurtransferase PspE/glucosylglycerate phosphorylase |
| Reads supporting (aligned to +/- strand): ref base . (20/28); new base T (274/263); total (295/304) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.31e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.78e-01 | |||||||||||
Only 100 of 635 total aligned reads displayed.
GACGCCAGTCAGGGCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑G‑‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGG > NZ_CP025268/1374716‑1374990 | gACGCCAGTCAGGGCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGACGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑G‑‑t > 2:1903642/1‑140 (MQ=255) aGTCAGGGCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑G‑‑t‑tt‑tttt < 1:5727762/140‑1 (MQ=255) gTCAGGGCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑G‑‑t‑tt‑tttt‑t < 2:733505/140‑1 (MQ=255) tCAGGGCAAGCACAAGCGAACCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑G‑‑t‑tt‑tttt‑tt < 2:8351335/140‑2 (MQ=255) ggCAAGCAAAAGAGATCCTTATCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑G‑‑t‑tt‑tttt‑tttctg < 2:4774201/140‑6 (MQ=255) ggCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCCTGAGCGGCGCTTATGCGCC‑G‑‑t‑tt‑tttt‑ttctgt > 2:2941158/1‑135 (MQ=255) caagcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAACGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTca < 2:5924591/140‑1 (MQ=255) caagcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTca < 1:1194752/140‑1 (MQ=255) caaccaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGCGAACTCCGGTCGCCAGAAAGCCATCGCAAAGCCGAAGGTCAAAGGTTAAAATAAATCACCATCAGCGGCGCTTATGCGCC‑G‑‑TAAA‑TTTT‑TCTGTca < 2:433808/140‑1 (MQ=255) aagcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCTCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTGATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTca‑c > 2:8607235/1‑140 (MQ=255) aagcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTca‑c > 1:695223/1‑140 (MQ=255) aagcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTca‑c < 1:2892899/140‑1 (MQ=255) gcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCa‑cac > 1:6784574/1‑140 (MQ=255) gcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCa‑cac > 1:1600071/1‑140 (MQ=255) gcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCa‑cac > 1:8911877/1‑140 (MQ=255) aaaaGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCt < 1:7947145/140‑1 (MQ=255) aaGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTa < 2:11397664/140‑1 (MQ=255) agagATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTAt > 2:1540962/1‑140 (MQ=255) agagATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTAt > 2:2536024/1‑140 (MQ=255) gaTCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTa < 1:9113925/140‑1 (MQ=255) gaTCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTa < 1:4436007/140‑1 (MQ=255) gaTCCTTAGCGAGATGGGATAGACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGGCAAAGGTTAAAAGTATTCACCATGTGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTa < 2:9374282/140‑1 (MQ=255) tCCTTAGCGAGATGTGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACa < 2:5670587/140‑1 (MQ=255) tCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACa < 1:6556259/140‑1 (MQ=255) tCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACa < 1:5448807/140‑1 (MQ=255) tCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACa < 1:6165495/140‑1 (MQ=255) tCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GA‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACa < 2:6572325/140‑1 (MQ=255) ccTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TGTGTGA‑GACGTTATTTACAt > 1:9458856/1‑140 (MQ=255) ccTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACAt > 1:4543010/1‑140 (MQ=255) cTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAATGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATc < 2:3406231/140‑1 (MQ=255) tAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATccc > 1:5106178/1‑140 (MQ=255) tAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATccc > 2:8123378/1‑140 (MQ=255) gCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAATGACATCGCATGGCCGAAGGTCAAAGGTTAAAAGATTTCACCATGTGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCa < 1:10681299/140‑1 (MQ=255) gCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCa < 1:5633645/140‑1 (MQ=255) gCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCa < 1:11443708/140‑1 (MQ=255) gCGAGATGGGATATACACACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGTTTAAAAGAATTCACCATGAGCGGCGATTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CAGCTTATTTTCATCCCCa > 2:882111/1‑140 (MQ=255) cGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTAA‑CACCTTATTTACATCCCCAt > 1:749885/1‑140 (MQ=255) agaTGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAg > 2:7198403/1‑140 (MQ=255) aTGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAGat > 2:7842620/1‑140 (MQ=255) ggATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCTAAGGTCAAAGTTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAGattat < 2:11070026/140‑1 (MQ=255) ggATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAGattat < 2:10721018/140‑1 (MQ=255) aCCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAGATTATTTGCGt > 2:5524630/1‑140 (MQ=255) aCCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAGATTATTTGCGt < 1:3779216/140‑1 (MQ=255) aCCCACGATGAGAACGACGGTGTACTGAAAGACATCGAAATTCCTAAGGTCTAAGGTTAAAAGATTTAACCATGATCGGCGCTTATGCGAC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAGATTATTTGCGt < 2:10560308/140‑1 (MQ=255) cccACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAGATTATTTGCGta > 1:2237531/1‑139 (MQ=255) cccACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TATGTCA‑CAACTTAATTACATACCCAAAGATTATTTTCGta > 1:4275320/1‑139 (MQ=255) cACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAGATTATTTGCGTCAg < 1:6367502/140‑1 (MQ=255) aCGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAGATTATTTGCGTCAGc > 1:4608500/1‑140 (MQ=255) cGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAGATTATTTGCGTCAGCt > 2:5075785/1‑140 (MQ=255) cGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAGATTATTTGCGTCAGCt < 2:6302585/140‑1 (MQ=255) cGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TATGTCA‑CACCTTATTTACATCCCCCTAGATTATTTGCGTCAGCt > 1:3610111/1‑140 (MQ=255) cGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TATGTCA‑CACCTTATTTACATCCCCATAGATTATTTGCGTCAGCt > 1:10142690/1‑140 (MQ=255) tGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTcac < 2:3892603/140‑1 (MQ=255) gagaACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTAA‑CACCTTATTTACATCCCCATAGATTATTAGCGTCAGCTcaca > 2:7513746/1‑140 (MQ=255) agaACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTca > 2:9900545/1‑97 (MQ=255) agaACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TATGTCA‑CACCTTATTTACATCCCCATAGATTATTTTCGTCAGCTCACaa > 1:2462694/1‑140 (MQ=255) aaCGCCGGGGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTACAAGAATTCACCATGCGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAAt < 2:1360617/140‑1 (MQ=255) aaCCCCGTTGGCATTAATTACAACGCAATCCCTACGTACAACGTTTAAACCAATAAACCATTCGCGGCCCTTATGCCCCTT‑‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAAt < 1:4073697/140‑1 (MQ=255) tcGCCGGTGTCCTGAAAGACATCGCTATGATGAAGGTAAAAGGTTAATAGAATTCTACATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATa < 2:6812590/139‑1 (MQ=255) cGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATAc > 1:4971142/1‑140 (MQ=255) cGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCGTATTTACATCCCCCTAGATTATTTGCGTCAGCTCACAAATAc > 1:10300578/1‑140 (MQ=255) tGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCttgt > 2:7034071/1‑138 (MQ=255) aTCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TGTGTCA‑CACCGTATTTTCATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTaaaaa > 1:2655390/1‑140 (MQ=255) tCGCAATGCCGAAGGTCAAAGGTTCAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑G‑‑T‑TT‑TTTT‑TTATTGACCACCTTATTTAAATCCCCTTAGATTATTTGCGGCACCTCACAAATACCCTTTTTCCCTGGTaaaaat > 2:5307882/1‑139 (MQ=255) gCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCC‑CACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATg > 2:2164126/1‑140 (MQ=255) gAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTg < 1:7161741/140‑1 (MQ=255) aaGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCCCAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGc > 2:2650715/1‑140 (MQ=255) aaGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGc < 1:3402987/140‑1 (MQ=255) aGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCg < 1:993379/140‑1 (MQ=255) ggTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGt < 1:5257174/140‑1 (MQ=255) cAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGAc < 1:9049931/140‑1 (MQ=255) cAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑G‑‑TATT‑TTTT‑TCTCTCA‑CACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGAc < 2:9019002/140‑1 (MQ=255) cAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGAGCCTT‑‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGAc < 2:9772720/140‑1 (MQ=255) aaGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATTGATTATTTGCGTCAGCTCACAAATACGCATTTTCCCTGGTAAAAAAATATTTCCTGCGTGACTa > 2:6967224/1‑140 (MQ=255) aaGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAATATGATTTCCTGCGTGACTa > 2:10335049/1‑140 (MQ=255) aGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTaa < 1:6485188/140‑1 (MQ=255) aaaaGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTTTCA‑CACCATATTTAAAAACCCAAAAATTATTTGCGTCAGCGCACCAATACGCGTTTTACCAGGTAAAAAATTTTTTACGTCGTGACTAAAAccc > 1:1046026/1‑140 (MQ=255) aaaaGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTAAATCCCCAAAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAAAGATTTCCTGCGTGACAAAAAccc > 2:3701605/1‑140 (MQ=255) aaaaGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TATGTGA‑CACCTTATTTACAACCCCAAAGATTATTTTCGTCAGCTAACAAATAAGCTTTTTACCTGGTAAAAAATGTTTTACTGAGTGACAaaaaaca > 1:11006050/1‑137 (MQ=255) aaaaGAATTCACCATGAGCGGCGCTTATGCGCC‑G‑‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCa < 1:10773026/67‑1 (MQ=255) aaGAATTCACCATGAGCGGCGCTTATGCGCC‑GA‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCtt < 1:8663193/140‑1 (MQ=255) gAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTtgt < 1:7773980/140‑1 (MQ=255) agtCACCATGAGCGGCGCTTATGCGCC‑G‑‑T‑TT‑TTTTGTCTGTCA‑CACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGc < 2:10220463/138‑1 (MQ=255) ttCACCATGAGCGGCGCTTATGCGCC‑GTTT‑TT‑TTTT‑TATGTCA‑CACCGTATTTAAAACCCCAAAGATTATTTTCGTCAGCTCACAAATACGCATTTTACCTGGTAAAAAATTATTTACTTCGTGACTAAAAACCATGTGc > 1:5813459/1‑140 (MQ=255) ttCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTGA‑CACCTTATTTAAATCCCCATAGAATATTTGCGTCAGCTCACAAATAAGCTTTTTCCCTGGTAAAAAAATATTTACTGCGTGACTAAAACCCTTTTGCt > 2:8021639/1‑140 (MQ=255) ttCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAGATTATTTGCGt > 2:4606734/1‑75 (MQ=255) ttCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAATTACGCTTTTTCCCTGGGAAAAAATGATTTCCTGCGTGTCTAAAACCCTTGGGCt > 2:6496692/1‑140 (MQ=255) ttCACCATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTAAATCCCCATAGATTATTTGCGGCAGCGCACAAATACGCTTTTTCCCTGGGAAAAAATGATTTCCTGCGGGTCTAAAACCCGTGTGcg > 1:5944922/1‑139 (MQ=255) ttCACCATGAGCGACGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TATGTCA‑CACCGTATTTACAACCCCCAAGATTATTTGCGTCAGCTCACAAATAAGCTTTTTACCTGGTAAAAAATTATTTACTGCGTGGCTAAAAACCAtgtggt > 1:10018399/1‑138 (MQ=255) cATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTAAATCCCCATATATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCGGGTAAAAAATGATTTCCTGCGGGACTAAAACCCTTGGGCTCAAtt > 1:3073637/1‑140 (MQ=255) cATGAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTAA‑CACCTTATTTACATCCCCATATATTATTTGCGTCAGCTCACAAATACGCTTTTTACCTGGTAAAAAATGATTTCCTGCGTGACTAAAAACCGTGTGCTCAAtt > 2:2319379/1‑140 (MQ=255) gAGCGGCGCTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGAc < 2:6700641/140‑1 (MQ=255) gAGCGGCGCTTATGCGCC‑G‑‑T‑TTAGTAT‑TCAGTCA‑CACAGAATTAACATCCCCAAAGATACTTAGCGTCAGCACACACATACGCTTTTTACCTGGTAAAAAATTATTTCCTGAGTTAATAAAACCCATGTGCACaaaagac > 2:7647237/1‑135 (MQ=255) gcTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTAt < 1:3192147/140‑1 (MQ=255) gcTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCAAAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCGTGTGCTCAATTGACAGTTTAt > 2:9147656/1‑140 (MQ=255) cTTATGCGCC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTAtt < 1:9745628/140‑1 (MQ=255) tGCGCC‑GT‑T‑TT‑TTTT‑TATGTCA‑CACCTTATTTACAACCCCAAAGAATATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAAAGATTTCCTGCGTGACTAAAACCCATGTGCTCAATTGACAGTTTATTTTCt > 2:3188859/1‑140 (MQ=255) gcgcC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAGATTTTTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAATATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTg < 2:4174119/140‑1 (MQ=255) gcgcC‑GT‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTg < 1:8191291/140‑1 (MQ=255) cc‑G‑‑T‑TT‑TTTTATCAGTCA‑CACCGTATTTACATACCCAAAGATTATTTGCCTCAGCTCAAAAATAAGCATTATACCAGGTAAAAAATGATTTCATGCGTGACAAAAACCCATGTGCTCAATTGACAGTTTATTTTATGCgg > 1:1808668/1‑140 (MQ=255) | GACGCCAGTCAGGGCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑G‑‑T‑TT‑TTTT‑TCTGTCA‑CACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGG > NZ_CP025268/1374716‑1374990 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |