| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,701,269 | +A | intergenic (‑380/+10) | uidA ← / ← uidR | beta‑glucuronidase/DNA‑binding transcriptional regulator UidR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,701,265 | 1 | . | A | 91.9% | 2465.2 / 186.8 | 709 | intergenic (‑376/+14) | uidA/uidR | beta‑glucuronidase/DNA‑binding transcriptional regulator UidR |
| Reads supporting (aligned to +/- strand): ref base . (21/36); new base A (270/376); total (295/414) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.87e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 734 total aligned reads displayed.
GCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑A‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTAAACG > NZ_CP025268/1701127‑1701401 | cGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑a‑a < 1:10070942/140‑1 (MQ=255) aTTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑a‑aa‑aa > 2:1025132/1‑139 (MQ=255) aTTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑a‑aa‑aa > 2:4464002/1‑139 (MQ=255) ttGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑c‑aactg > 2:7192714/1‑137 (MQ=255) ggAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑A‑Aa‑a‑agaga < 1:2835668/140‑1 (MQ=255) aaaCTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCa < 1:7733527/140‑1 (MQ=255) aCTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTGATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAgg > 2:10454214/1‑140 (MQ=255) ctctCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGTGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGa < 2:9266344/140‑1 (MQ=255) ctctCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGa < 2:1962144/140‑1 (MQ=255) tctcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGAt < 1:5044161/140‑1 (MQ=255) tctcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGAt < 1:3230736/140‑1 (MQ=255) tctcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGAt < 2:2585527/140‑1 (MQ=255) tctcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGAt < 1:1565740/140‑1 (MQ=255) tctcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGAt < 2:1387370/140‑1 (MQ=255) tctcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGAt < 2:10518426/140‑1 (MQ=255) tctcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTGTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGAt < 2:5195933/140‑1 (MQ=255) tcATGACATATGGCTACAGTGAAGATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGc < 1:9056185/140‑1 (MQ=255) cATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCg > 1:5562531/1‑140 (MQ=255) cATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCg > 2:380120/1‑140 (MQ=255) tGACATATGGCTACATTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGt < 2:2180891/140‑1 (MQ=255) tGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGt < 2:2817937/140‑1 (MQ=255) tGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGGAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATa > 1:9597938/1‑140 (MQ=255) tGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATa > 1:1075460/1‑140 (MQ=255) tGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTATTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATa > 1:1708815/1‑140 (MQ=255) tGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATGTTTGCACAGAGAACTTACGATATGACACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATa > 2:10018622/1‑140 (MQ=255) gCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGACATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATAcc < 1:2050095/140‑1 (MQ=255) tACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGc > 1:2426037/1‑140 (MQ=255) cAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCa > 1:4386347/1‑140 (MQ=255) cAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCa > 1:7962901/1‑140 (MQ=255) gggAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAat > 2:4083646/3‑140 (MQ=255) tGACTATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAatc > 1:5466469/1‑140 (MQ=255) gAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAatca > 1:3502536/1‑140 (MQ=255) aaTATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAatcat > 2:1181702/1‑140 (MQ=255) aaTATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAatcat > 2:9001092/1‑140 (MQ=255) aaTATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAatcat > 1:697120/1‑140 (MQ=255) atatTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAatcatc < 1:3586815/140‑1 (MQ=255) tatTTTGGGGTGAATTCTCCGAAGCCGGGAAGGATATTTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATcg < 2:7272139/140‑1 (MQ=255) tatTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATcg < 1:6656813/140‑1 (MQ=255) atTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGACTCAGGATGCGGTTAAGATACCGCCAATCATcgc > 1:6571474/1‑140 (MQ=255) ttGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGAt < 1:42617/111‑1 (MQ=255) gtGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTCCGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑ACAA‑AGAGAGAGAATCAGGATGCGGTTCAGATACCGCCACTCATcgcgcg > 2:4617091/2‑140 (MQ=255) ggggggAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGt < 2:681274/139‑1 (MQ=255) ggggAATTCTCCGAAGCCTGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAAt > 1:11413608/1‑140 (MQ=255) ggAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAatcat < 2:7608757/128‑1 (MQ=255) tcCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCa < 2:3541508/140‑1 (MQ=255) cGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑A‑AATAGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCaaa > 2:5482004/1‑140 (MQ=255) gAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAac > 1:8817661/1‑140 (MQ=255) aGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAacga > 1:6858210/1‑140 (MQ=255) gCCGTGAAGTATAATTATTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAacgac < 2:8606629/140‑1 (MQ=255) ccGGGAAGGATAATTTTTGCACAGAGAACTGACGATCTGACACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGATAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAacgacg < 2:1629498/140‑1 (MQ=255) ccGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAacgacg < 2:2380717/140‑1 (MQ=255) ccGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAacgacg < 1:4773331/140‑1 (MQ=255) ggAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCtt > 1:837838/1‑140 (MQ=255) ggAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCtt > 1:3949348/1‑140 (MQ=255) aaGGATAATTTTTGCACAGATAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGTATGCGTTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCa < 1:6343114/140‑1 (MQ=255) aaTTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGcc < 2:6714214/140‑1 (MQ=255) aaTTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGcc < 1:5906014/140‑1 (MQ=255) tttGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGt > 1:5229763/1‑140 (MQ=255) gCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCCGGATGCGCTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCAAGCGCCAGGTCtt > 2:7137788/1‑140 (MQ=255) gCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGa > 2:1548652/1‑72 (MQ=255) agaAATTACGATCTGAAACGCGGGCACAGTGATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCtt > 2:6132858/1‑140 (MQ=255) ttACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGata < 1:307372/140‑1 (MQ=255) ttACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGata < 1:9489335/140‑1 (MQ=255) ttACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGata < 2:10756621/140‑1 (MQ=255) tACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGatat < 2:10968285/140‑1 (MQ=255) aCGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATc < 2:6352750/140‑1 (MQ=255) aCGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATc < 2:8374368/140‑1 (MQ=255) ctatGAACCGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc < 2:328988/139‑1 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc > 1:10910380/1‑140 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc < 1:8614247/140‑1 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc > 2:1129619/1‑140 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc < 1:11235163/140‑1 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑ACAA‑AGAGAGAGAATCAGGATGCGGTGAAGAGACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc < 2:11091979/140‑1 (MQ=255) gAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGt > 1:7213179/1‑140 (MQ=255) gAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGt < 2:4987100/140‑1 (MQ=255) aaaCGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTa < 1:7630357/140‑1 (MQ=255) aaaCGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTa < 1:259740/140‑1 (MQ=255) aaaCGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTa < 2:8219820/140‑1 (MQ=255) aCGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTaca < 2:1755402/140‑1 (MQ=255) aCGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTaca < 1:8160217/140‑1 (MQ=255) cgGGCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCg < 1:1286694/140‑1 (MQ=255) gggCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGt > 1:1400559/1‑140 (MQ=255) gggCACAGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGt < 1:6492271/140‑1 (MQ=255) acaGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGt > 2:11460792/1‑140 (MQ=255) caGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTc < 1:9826250/140‑1 (MQ=255) caGTTATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTc < 1:8467209/140‑1 (MQ=255) tATCACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCATGATGCGGTTAAGATACCGCCAATCATCGCGAGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGAt < 2:4243384/140‑1 (MQ=255) tCACCAGACCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATcc < 2:9569497/140‑1 (MQ=255) cACCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCca > 2:3147984/1‑140 (MQ=255) aCCAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCACGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCcag > 2:10639877/1‑140 (MQ=255) ccAGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAATCGACGCTTCTCGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCcagc > 2:7947598/1‑140 (MQ=255) aGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCCGTACACCGTAGGTCAGATCcagcag > 2:5839016/1‑140 (MQ=255) aGCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCcagcag > 1:10593967/1‑140 (MQ=255) gCCCGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGt < 1:1181702/140‑1 (MQ=255) cccGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCa < 2:6636954/82‑1 (MQ=255) cccGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTc < 1:6046666/96‑1 (MQ=255) cccGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTa > 2:5696665/1‑140 (MQ=255) cccGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTa > 1:9381278/1‑140 (MQ=255) cccGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTa > 1:7510142/1‑140 (MQ=255) cccGCCGAA‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTa > 1:10257928/1‑140 (MQ=255) | GCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑A‑AA‑AGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTAAACG > NZ_CP025268/1701127‑1701401 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |