| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,826,683 | (A)7→8 | intergenic (‑247/+51) | chbB ← / ← osmE | PTS N,N'‑diacetylchitobiose transporter subunit IIB/osmotically‑inducible lipoprotein OsmE |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,826,676 | 1 | . | A | 93.5% | 2922.3 / 166.9 | 823 | intergenic (‑240/+58) | chbB/osmE | PTS N,N'‑diacetylchitobiose transporter subunit IIB/osmotically‑inducible lipoprotein OsmE |
| Reads supporting (aligned to +/- strand): ref base . (41/12); new base A (516/251); total (560/263) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.70e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 834 total aligned reads displayed.
GCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑C‑‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGTATCAT > NZ_CP025268/1826541‑1826810 | gCTGAAAGGAGTATACGGTATATACCTGAGCAATAGTATTTCTTTGTACTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTGCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑C‑‑aa‑aa > 2:1799393/1‑140 (MQ=255) gAGTATACGTTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑C‑‑aa‑aa‑aaaaccgg < 1:2543054/140‑6 (MQ=255) tataGACCTGAGCAATAGTATTTCTTTGAGCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGAGCCTCTTCACATTTCGGGCAAATATTTCGCGAAGATAATTAAGAACTCAGGC‑CT‑AA‑AT‑ACT‑CCGGCGCAATGGcc > 2:9268796/1‑140 (MQ=255) tataGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGcc > 2:3016055/1‑140 (MQ=255) tataGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGcc > 1:5629404/1‑140 (MQ=255) tataGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCATCTTCACATTTCGGGCAAATAATTCGCGCAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGcc > 2:8452353/1‑140 (MQ=255) ataGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCg > 2:6929942/1‑140 (MQ=255) aGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGt > 1:11116931/1‑140 (MQ=255) aGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGt > 2:1446781/1‑140 (MQ=255) aCCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGttt > 1:7583191/1‑140 (MQ=255) aCCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGttt > 2:5032178/1‑140 (MQ=255) aCCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGttt > 1:271039/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATGAAGTGTTTCTCCATGACCTGTGGTTATGACCCTGTTCACATTTCGGGCAAATCATTCGCGAAGAGAATTATGACCTCTGGCAC‑‑TA‑TA‑AAT‑CCGGCGCAAGGGCCGGtggccggt > 2:7498937/1‑133 (MQ=255) aGCAATAGTATTTCTTTGACCTTATACATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACAGTTCGGGCTAATAATTCGCGACGATAATTCAGAAGTCTGGC‑C‑‑AA‑AACATA‑CCGGCGCAATGGGCGGTTTcgggt > 2:1093468/1‑136 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATACTTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgtt > 1:160567/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CAAAA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgt > 1:9564676/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCTATGGGCGGTTTGCgtg > 1:10455617/1‑139 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCTATGGCCGGTTTCCgtt > 1:6462479/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgtt > 1:6768172/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgtt > 1:8650313/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgtt > 1:5988211/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgtt > 1:5453296/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgtt > 1:5199020/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgtt > 2:280207/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgtt > 1:9950260/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgtt > 1:4361093/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgtt > 2:10240788/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgtt > 1:3704795/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgtt > 2:345404/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgtt > 1:2962714/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgtt > 1:1340284/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgtt > 1:22459/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgtt > 2:946941/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTATCCgtt > 2:10809472/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAAAGGCCGGTTTCCgtt > 1:7902854/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑C‑‑AA‑AA‑AAATCCGGCGCAATGGCCGGTGTCCgtg > 1:5825151/1‑139 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCGCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgtt > 1:7180705/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACACTCTTCACATTTCTGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgtt > 2:5462847/1‑140 (MQ=255) aGCAATAGTATTTCTATGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgtt > 1:3841277/1‑140 (MQ=255) aGCAAGAGTATTTCTTTGACCTTATCAATTGTTTCTCCTTGACCGGTGGTTATGAGCCTCTTCACATTTAGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑A‑‑AACAA‑AAA‑CCGGCGCACTGGCCGGTTTCCgtg > 2:2265633/1‑139 (MQ=255) tAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTAc > 1:7667577/1‑140 (MQ=255) tAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTAc > 2:7701590/1‑140 (MQ=255) tAGTATTACTTTGACATTATAAATTGTTTCTCCTTGACAGGTTGTTATGAACCTCTTCAAAATACGGGCAAATACATCGCGAAGATAATTAAGACCTCAGGC‑CA‑AA‑AA‑AAA‑CAGGAGAAATGGCCGGTATCCGTTTTTAc > 1:10025895/1‑140 (MQ=255) tttCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAg > 2:5303539/1‑140 (MQ=255) tttCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAAATCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAg > 2:3711723/1‑140 (MQ=255) ttCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGc > 2:10046541/1‑140 (MQ=255) cTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCtt > 2:4179610/1‑140 (MQ=255) ttGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCAA‑‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTc > 1:11337361/1‑140 (MQ=255) tGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCa < 2:11620204/140‑1 (MQ=255) aCCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACACTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCAGGTTTCCGTTGTTACTCAAGATTTCAGa > 1:4733827/1‑140 (MQ=255) ccTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGAc < 2:9623430/140‑1 (MQ=255) ccTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGAc < 2:5862742/140‑1 (MQ=255) ataAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAAt > 1:1102120/1‑140 (MQ=255) ataAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAAt > 1:4580098/1‑140 (MQ=255) ctcCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATCATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCg < 1:2034857/140‑1 (MQ=255) ctcCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCg < 2:11180010/140‑1 (MQ=255) ctcCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCg < 2:7837637/140‑1 (MQ=255) tcCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGTCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGc < 2:6696590/140‑1 (MQ=255) ccTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCa < 2:6030327/140‑1 (MQ=255) ttGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGc > 2:8991282/1‑140 (MQ=255) tGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGcc > 1:4470986/1‑140 (MQ=255) aCCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCtg < 1:7404253/140‑1 (MQ=255) aCCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCtg < 2:7187218/140‑1 (MQ=255) aCCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCtg < 2:2566943/140‑1 (MQ=255) aCCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCtg > 1:6187472/1‑140 (MQ=255) gtgGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGa > 1:3479277/1‑140 (MQ=255) gtgGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGa > 1:4114679/1‑140 (MQ=255) gtgGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGa > 1:11599236/1‑140 (MQ=255) tgGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGAt > 2:8135161/1‑140 (MQ=255) tgGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑C‑‑AA‑AATAAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGAt > 1:4990708/1‑140 (MQ=255) tgGTTATGACCCTCTTCACATGTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTGACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGAt < 2:8020636/140‑1 (MQ=255) tATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAgt > 2:2021790/1‑140 (MQ=255) gACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTc < 1:4865881/140‑1 (MQ=255) gACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTc < 1:1962475/140‑1 (MQ=255) gACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTc < 2:439598/140‑1 (MQ=255) aCCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTAATTACTTCGCAGCCTGTGGATCAGTGTCg > 2:6520401/1‑140 (MQ=255) ccTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTa > 1:1023469/1‑140 (MQ=255) ccTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTa > 1:6042362/1‑140 (MQ=255) tctTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTAtt < 2:4043787/140‑1 (MQ=255) tctTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTAtt < 1:9123415/140‑1 (MQ=255) ctTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTc > 2:458246/1‑140 (MQ=255) ctTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTc > 2:2175711/1‑140 (MQ=255) ctTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTc > 1:9702976/1‑140 (MQ=255) acaTTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATTGCCTGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGca < 2:631673/140‑1 (MQ=255) acaTTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGca < 1:6622180/140‑1 (MQ=255) acaTTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGca < 1:8922120/140‑1 (MQ=255) ttCGGGCAAATAATTCGCGAAGATAAGTAAGACCTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAAGTGCTTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAgg > 2:1927628/1‑140 (MQ=255) cGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTc > 1:3961621/1‑140 (MQ=255) gggCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCt > 1:2108563/1‑140 (MQ=255) ataatTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAAc < 2:4751157/140‑1 (MQ=255) aatTCGCGAAGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCg < 2:8703648/140‑1 (MQ=255) aaGATAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTtgat < 2:3210792/140‑1 (MQ=255) aTAATTAAGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGAc < 1:3239995/140‑1 (MQ=255) ttAAGAACTCAGGC‑C‑‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTc < 1:1791622/140‑1 (MQ=255) aGAACTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCg < 1:9300548/140‑1 (MQ=255) aaCTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCNGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGt < 1:10785338/140‑1 (MQ=255) aaCTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGt < 2:10606944/140‑1 (MQ=255) aCTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACTGGTCTGATAACCGGAGTTGATGTCATGTCCGGTa > 2:11468309/1‑140 (MQ=255) cTCAGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCa < 1:7015673/76‑1 (MQ=255) aGGC‑CA‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGTatcat > 1:8269900/1‑140 (MQ=255) | GCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGC‑C‑‑AA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGTATCAT > NZ_CP025268/1826541‑1826810 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |