| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,855,625 | +C | intergenic (+116/‑50) | sppA → / → ansA | signal peptide peptidase SppA/asparaginase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,855,621 | 1 | . | C | 98.3% | 2437.6 / 27.0 | 709 | intergenic (+112/‑54) | sppA/ansA | signal peptide peptidase SppA/asparaginase |
| Reads supporting (aligned to +/- strand): ref base . (4/8); new base C (258/438); total (263/446) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 738 total aligned reads displayed.
TTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑T‑CCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTG > NZ_CP025268/1855482‑1855755 | cTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑T‑ccc‑c < 2:11237934/140‑1 (MQ=255) tGCGCCTACATGCGTTAAGTCTTGTAATGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGACCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑T‑ccc‑cctggct < 2:3972777/140‑7 (MQ=255) tGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCt < 1:1008015/140‑1 (MQ=255) tGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCt < 1:6459278/140‑1 (MQ=255) tGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCt < 2:10169760/140‑1 (MQ=255) tGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCt < 1:4481008/140‑1 (MQ=255) tGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCt < 2:251488/140‑1 (MQ=255) tGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCt < 1:3064314/140‑1 (MQ=255) tGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCt < 2:4826103/140‑1 (MQ=255) tGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCt < 1:11142745/140‑1 (MQ=255) gcgcCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTc > 2:5862553/1‑140 (MQ=255) cgcCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATCTTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCa > 2:9032241/1‑140 (MQ=255) cgcCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCa > 1:954860/1‑140 (MQ=255) cgcCAACAGGCGTTAAGTCTAGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCCTATTTACTTATCCGCAAAGTATCAGGTGAGC‑TCCCC‑CTGCCTCa > 2:1212551/1‑140 (MQ=255) aCATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGtat > 1:7728674/1‑140 (MQ=255) cATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGtata > 2:517168/1‑140 (MQ=255) cGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACt > 1:1345113/1‑140 (MQ=255) aaGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTg < 1:11463744/140‑1 (MQ=255) cTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGctct < 1:5366587/140‑1 (MQ=255) ttGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCtt < 1:1881451/140‑1 (MQ=255) tGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCttt > 1:2596657/1‑140 (MQ=255) tGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCttt > 2:4198278/1‑140 (MQ=255) tGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCttt < 1:7323271/140‑1 (MQ=255) tGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCAAATTTCCATATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCttt > 1:10622231/1‑140 (MQ=255) tACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCg < 1:570087/140‑1 (MQ=255) tGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGACTCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTAGata > 2:11399723/1‑140 (MQ=255) tGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGata < 2:8380745/140‑1 (MQ=255) gAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGatat < 2:503704/140‑1 (MQ=255) aGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACTAATCCTCTTCCCGGTGGTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TGCCC‑CTGCCTAACGTATATACTTTTGCTCTTTCGATAtc > 2:4386034/1‑140 (MQ=255) aGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCAC‑CCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATAtc > 2:719037/1‑140 (MQ=255) aGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATAtc > 2:10971723/1‑140 (MQ=255) aGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATAtc > 1:4231057/1‑140 (MQ=255) aGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATAtc > 2:1600837/1‑140 (MQ=255) aGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATAtc > 2:3469836/1‑140 (MQ=255) aGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATAtc > 1:2117923/1‑140 (MQ=255) aGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATAtc > 1:7417122/1‑140 (MQ=255) aGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATAtc > 1:1547439/1‑140 (MQ=255) aGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCAATAtc > 1:4676554/1‑140 (MQ=255) aGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCGGTTTCGCCCCATATTGCCTTATCCGCCTAGTCTCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTGTTGCTCTGTCGATAtc > 2:5435022/1‑140 (MQ=255) aGTGGCCGACAGATCGTCGGCCACATTATTTTTAACGGCCACGAATCCTCTTCCCGCTCTTTCCCCCCATAAATCCTTAGCCGCACAGTATCAGGTGCGCAC‑CCC‑CTGCCTCACGTATAAACTTTTGCTCTTTCGatata > 2:10627286/1‑139 (MQ=255) aGTGGCCGACAGATCGTCGGCCACAATATTTTTTACCTCGACGAAACCTCTTCCCGCTGTTTCGCCCCATAATTCCATATCCGCATAGTATCACGAGCGC‑TCCCC‑CTGCCTCACGTATATACTATTGCTCTTTCGAAAtc > 2:7022077/1‑140 (MQ=255) ggCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 2:3009116/140‑1 (MQ=255) ggCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 1:6041946/140‑1 (MQ=255) ggCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 1:9116854/140‑1 (MQ=255) ggCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCGTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATTTACTTTTGCTCTTTCGATAtcttt < 1:7849549/140‑1 (MQ=255) ggCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCGTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 1:10850204/140‑1 (MQ=255) ggCCGACAGATCGTCGGCCACATTATTTAGTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 2:8198388/140‑1 (MQ=255) ggCCGACAGATCGTCGGCCACAGTATTTTTTACGTCGACGAATCCTCTTCCCGCTGGTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 2:7384007/140‑1 (MQ=255) ggCCGACAGATCGTCGGCCACAATATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 2:10508834/140‑1 (MQ=255) gCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATAtcattc > 1:3248015/1‑140 (MQ=255) gCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTGTCGATAtcattc > 1:287453/1‑140 (MQ=255) aCAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCatat < 1:3569889/140‑1 (MQ=255) aTCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCatatcaat > 2:1904900/1‑140 (MQ=255) aTCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACATTTGCTCTTTCGATATCATTCatatcaat > 2:3661235/1‑140 (MQ=255) tcgtcgGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCatatcaata < 2:10247608/140‑1 (MQ=255) gCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGc > 1:8349036/1‑140 (MQ=255) caTTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCaaaa > 1:9709792/1‑140 (MQ=255) attTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGaaa < 2:3296512/140‑1 (MQ=255) attTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGaaa < 1:5106174/140‑1 (MQ=255) attattACGTCGACGAATCCTCTTCCCGCTGTGTCGCCCCATATTTCCTTATCCGCCTAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAAt < 2:6455531/136‑1 (MQ=255) ttACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAAt > 1:9492022/1‑140 (MQ=255) tACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAAtt > 2:7509670/1‑140 (MQ=255) ctCGACGAATCCTCTTCCCGCTGTATCTCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATCTCATTCATATCAATATCATGCAAAAGAAATCAATGTAc < 2:7875124/139‑1 (MQ=255) tCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACg < 1:8934070/140‑1 (MQ=255) cgaATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGc < 2:5614625/140‑1 (MQ=255) ccTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTaca < 1:5231696/140‑1 (MQ=255) ttCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACAcggg < 1:8816360/140‑1 (MQ=255) ttCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACAcggg > 1:9895737/1‑140 (MQ=255) cccGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACAcgggcg > 1:5467483/1‑140 (MQ=255) cGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACAcgggcggg < 1:11549259/140‑1 (MQ=255) gCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGa > 2:9316307/1‑140 (MQ=255) cTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGAc < 1:6592918/140‑1 (MQ=255) cTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGAc < 1:2363655/140‑1 (MQ=255) gTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCa > 1:7660050/1‑140 (MQ=255) gCCCCATAGTGCCCTATCCGCAGAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGAGATCCTTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCggg < 1:10968591/140‑1 (MQ=255) atatTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCa < 1:8014339/140‑1 (MQ=255) tatTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAg > 2:8923824/1‑140 (MQ=255) tatTTCCTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAg < 2:2281319/140‑1 (MQ=255) ccTTATCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 2:864906/69‑1 (MQ=255) ctCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGAGATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAg < 2:280864/139‑1 (MQ=255) aTCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAg < 2:9837001/140‑1 (MQ=255) aTCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAg < 2:2093864/140‑1 (MQ=255) aTCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAg < 1:1126371/140‑1 (MQ=255) aTCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAg < 1:3371708/140‑1 (MQ=255) aTCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAg < 1:3773234/140‑1 (MQ=255) aTCCGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAg < 2:4459176/140‑1 (MQ=255) aTCCGCATAGTATCAGGTGCGC‑T‑CCCACTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAg < 1:8615835/140‑1 (MQ=255) aTCCGCATAGGATCAGGTGCGC‑T‑CCCNCTGCCTCNCGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCNTCGGGATGCAGCGTTCCGAg < 1:6245745/140‑1 (MQ=255) ccGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCa < 1:8105493/140‑1 (MQ=255) ccGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCa < 1:4896176/140‑1 (MQ=255) ccGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATAGACTTTGGCTCTTTAGAGATCATTCAGATCAATCTCATGCACAAGAAATCAATTTACGTGGCCGACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCa < 2:8033363/140‑1 (MQ=255) cGCATAGTATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAg < 1:6775699/140‑1 (MQ=255) caaaGTATCAGGAGCCC‑TCCCC‑CTGCCTCCCTTATATACGTATGCTCTTTCGATATCATTCATAGCAAGATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGTGCAggg < 2:6743533/137‑1 (MQ=255) tATCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTtata > 2:6158876/1‑140 (MQ=255) tCAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTtatata < 1:6989469/140‑1 (MQ=255) cAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATCTCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATAc < 2:9658198/140‑1 (MQ=255) cAGGTGCGC‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATAc < 1:4048153/140‑1 (MQ=255) gcgc‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATAtcattca < 1:10191439/49‑1 (MQ=255) gcgc‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGgtg > 2:1399830/1‑140 (MQ=255) gcgc‑TCCCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGgtg < 1:10455035/140‑1 (MQ=255) | TTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGC‑T‑CCC‑CTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTG > NZ_CP025268/1855482‑1855755 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |