| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,014,858 | +G | intergenic (+159/+61) | arcC → / ← yqeB | carbamate kinase/selenium‑dependent molybdenum cofactor biosynthesis protein YqeB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,014,857 | 1 | . | G | 99.1% | 1808.8 / 7.1 | 530 | intergenic (+158/+62) | arcC/yqeB | carbamate kinase/selenium‑dependent molybdenum cofactor biosynthesis protein YqeB |
| Reads supporting (aligned to +/- strand): ref base . (3/2); new base G (278/244); total (282/248) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 | |||||||||||
Only 100 of 545 total aligned reads displayed.
AATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑A‑GCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTCAAGTACG > NZ_CP025268/3014718‑3014991 | aTACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑A‑g < 1:3077917/140‑1 (MQ=255) tACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCGTTGTTGAGGCCGGCTGCGGCGCGAGCGCCGTATCCGTCCGACAAAACCTCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑A‑gg < 2:11503909/140‑2 (MQ=25) aCCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑A‑ggc > 1:88475/1‑138 (MQ=255) ccATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGAGTGCAATGCACGTGTAGGCCTGATAAGCGTAGCGCATC‑A‑ggca > 1:3746407/1‑137 (MQ=255) tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGNCCTGATAAGCGTAGCGCATC‑AGGCA‑Att > 1:6288605/1‑140 (MQ=255) tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑Att > 1:8896263/1‑140 (MQ=255) tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑Att > 1:4640374/1‑140 (MQ=255) tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑Att > 1:2800875/1‑140 (MQ=255) tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑Att > 1:1330847/1‑140 (MQ=255) tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑Att > 2:8349835/1‑140 (MQ=255) tCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGGCCTAGAATACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGAGAAGCGTAGCGCATC‑A‑ggcaatg > 2:11335703/1‑134 (MQ=21) cGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTg > 2:4940616/1‑140 (MQ=255) gCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGc > 2:1580133/1‑140 (MQ=255) ccAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCg > 2:5888198/1‑140 (MQ=255) aaGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATACGCGTAGCGCATC‑AGGCA‑ATTTGGCGttt > 1:8079076/1‑140 (MQ=255) tGTCACGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGtcat < 1:563366/140‑1 (MQ=255) tGTCACGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAAGTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGtcat < 1:6602145/140‑1 (MQ=255) tGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGtcat < 2:2174392/140‑1 (MQ=255) tGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGtcat < 1:7742573/140‑1 (MQ=255) tGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGtcat < 1:815252/140‑1 (MQ=255) tGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGtcat < 1:3447815/140‑1 (MQ=255) tGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGtcat < 2:3105943/140‑1 (MQ=255) tGTCAAGGAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGtcat < 1:146793/140‑1 (MQ=255) agtGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAg < 1:1580133/140‑1 (MQ=255) agtGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAg < 1:10060770/140‑1 (MQ=255) gtGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCACTGCACTTGTAGGCCTGATCAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAgg > 2:1949266/1‑140 (MQ=255) gtGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAgg < 1:4812936/140‑1 (MQ=255) gtGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAgg < 1:7180589/140‑1 (MQ=255) gtGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCAGGCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAgg < 2:3938553/140‑1 (MQ=255) tGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGc < 1:2873912/140‑1 (MQ=255) tGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGc < 1:1885004/140‑1 (MQ=255) gcgcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGcc > 1:865895/1‑140 (MQ=255) gcgttgtagCTGCCGGATGCGGCGCGAGCGCCCTATCCGTCCTACAACACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCACAGGCCgg < 2:5760507/137‑1 (MQ=21) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 1:10133969/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 1:6920452/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 1:1060710/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 1:1136117/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 1:11458277/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 1:120009/140‑1 (MQ=255) gcTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCgg < 1:2467059/140‑1 (MQ=255) cTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCggg < 1:9603055/140‑1 (MQ=255) tttGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCgggt < 2:10924138/140‑1 (MQ=255) ttgttgATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACGTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCTGTCTCAGGCCgggtg > 2:6265383/1‑140 (MQ=255) tgATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGcc > 1:9766504/1‑131 (MQ=255) gATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTaa < 2:5578178/140‑1 (MQ=255) aggCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCACTAGATTGCAATGCACGTGGAGGCCTGATAAGCGTAGCGCATCTG‑GCA‑AGTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAAt > 2:1310498/3‑140 (MQ=21) ccGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATAcc > 1:10873816/1‑140 (MQ=255) gATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATc < 1:10307594/140‑1 (MQ=255) aTGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATcc > 2:4319802/1‑140 (MQ=255) aTGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGGTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATcc > 2:7992239/1‑140 (MQ=255) gcggcgCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGAGTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑A‑GGATATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCgg < 1:4958111/140‑1 (MQ=255) gcgcGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCa > 1:3919518/1‑140 (MQ=255) gcgcGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGGCTCAGGCCGGGTGGGTCATACCATCCGGCCa > 1:2276782/1‑140 (MQ=255) cgcgAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCAt > 1:944577/1‑140 (MQ=255) cgcgAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTGGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCAt > 1:4182373/1‑140 (MQ=255) gcgAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCAtt < 2:9187198/140‑1 (MQ=255) gcCTTATCCGTCCTACAAAACATCGCAAATGCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCACAGGCCGGGTGGGTACTACCATCCGGCCAATTTCAtt < 2:3579237/140‑1 (MQ=25) tCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGcc < 2:3490537/140‑1 (MQ=255) accGTCCTACACCACATCGCAACTTGCAGAGCAGGCACTGCACTGGGAGGCCTGAGAAGCGTAGCGCCAC‑AGGCA‑ATTTGGCGTAGGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCCTTTCAGcc < 2:7172630/139‑1 (MQ=255) gTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACt > 2:4597755/1‑140 (MQ=255) cTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTcc > 1:5743918/1‑140 (MQ=255) cTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTcc > 1:432889/1‑140 (MQ=255) cTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTcc > 2:887340/1‑140 (MQ=255) cATCGCAAATTCATGAGATTGCAAGGCACTTGTAGGCCTGATATGCGGTGCGCATC‑AGGCA‑ATTTGGCGTTGGTCAGCAGTCTCAGGCCGGGTGGGTCATACCATCCGGCCATTTTCTTTTTAGCCACTTCCTGCActtc > 2:1511454/1‑140 (MQ=25) cATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCCTTTTCATTTAAGCCACTTCCAGCActtc > 2:7773136/1‑140 (MQ=255) cAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTg > 1:7834251/1‑140 (MQ=255) cAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCtt < 1:7299073/140‑1 (MQ=255) aTAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTc < 2:2947402/140‑1 (MQ=255) tAGCTTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCa < 2:7620337/140‑1 (MQ=255) tAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCa < 2:1003/140‑1 (MQ=255) tAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCa < 1:2590257/140‑1 (MQ=255) cactGCAATGCACGTGTAGGCCAGAAAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTGTGTCATCAGTCTCAGGCCGGGTGGGTAATACCAGCCGGCCATTTTCATTTAAGCCACTTCCAGCACGTCTTTTGTCGCGTTAACg < 2:6661627/137‑1 (MQ=37) ttGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGcc < 1:7926405/140‑1 (MQ=255) tGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGccc > 1:613004/1‑140 (MQ=255) tGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGccc > 2:8676106/1‑140 (MQ=255) gCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATAAGTCTCAGGCCGGTTGGGTAATACCATCCGGCCATTTACATTTAAGCCACTTCCAGCACTTCTATTGTCGCTTTCACGCCCt < 2:1816309/140‑1 (MQ=38) aaTGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGa < 2:2468815/140‑1 (MQ=255) cTTGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATc > 1:3284577/1‑140 (MQ=255) ttGTAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCa < 1:8495327/140‑1 (MQ=255) tAGGCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAAca > 1:8020617/1‑140 (MQ=255) ggCCTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAAcatc > 1:198912/1‑140 (MQ=255) ccTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAAc > 2:9081425/1‑135 (MQ=255) ccTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAAc < 1:9081426/135‑1 (MQ=255) cTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCAtt < 2:9647994/140‑1 (MQ=255) cTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCAtt > 1:1114863/1‑140 (MQ=255) cTGATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCAtt < 1:5907898/140‑1 (MQ=255) gATAAGCGTTGCGCATC‑AGGCA‑ATTTGGCGTATGTCATCAGTCTCAGGCCGGGTGGGTACTACCATCCGGCCAGTTTCATTTAAGCCACTTCCAGCACTTCGGTTGTCGCATTCACGCCCTGATGCATCAACCTCAATaa > 2:10531143/1‑140 (MQ=255) gATAAGCGTAGCGCATC‑AGGCA‑CTTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTCATACCATCCGGCCCTTTTCATTTAAGCCACTTCCAGCACTTCTGTGGTCGCTTTCACGCCCTGATGCATCACCAGCATTaa > 2:9439770/1‑140 (MQ=37) gATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTat > 1:7049576/1‑139 (MQ=255) gATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTaa > 2:5329991/1‑140 (MQ=255) gATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTaa > 2:5172622/1‑140 (MQ=255) gATAAGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTaa > 1:5241621/1‑140 (MQ=255) gATAAGCGTAGCGCATC‑AGGCA‑ATTGGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTaa < 1:9249252/140‑1 (MQ=255) aGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGTGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGcc < 2:7003735/140‑1 (MQ=255) aGCGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGcc < 2:10719693/140‑1 (MQ=255) cGTAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACCTCATTAACGCCTc > 2:2745370/1‑140 (MQ=255) tAGCGCATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTCaa > 2:8130880/1‑140 (MQ=255) cgcATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTCAAGTa > 1:10460805/1‑140 (MQ=255) cgcATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTCAAGTa > 2:10368930/1‑140 (MQ=255) cATC‑AGGCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTCAAGTAcg < 2:10117476/140‑1 (MQ=255) | AATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATC‑A‑GCA‑ATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTCAAGTACG > NZ_CP025268/3014718‑3014991 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |