BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP025268	695911 =	0 (0.000)	306 (0.500) +GAAGAAACAATC	47/250	5.9	54.5%	intergenic (‑33/+2)	CXP41_RS03680/CXP41_RS03685	tRNA‑Gln/tRNA‑Gln
*	?	NZ_CP025268	= 696182	560 (0.830)	306 (0.500) +GAAGAAACAATC	47/250	5.9	54.5%	intergenic (‑1/+379)	CXP41_RS03695/asnB	tRNA‑Met/asparagine synthase B
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 563 total aligned reads displayed.

CTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCGTGGCGCTATATTCG  >  NZ_CP025268/696043‑696321

  tGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATc                                                                                                                                           >  1:8312528/1‑140 (MQ=255)

  tGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATc                                                                                                                                           >  2:8300630/1‑140 (MQ=255)

  tGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATAATGAGTGATGTGCTCTAACCCACAGAGCTACGTCGCCATc                                                                                                                                           >  2:9309101/1‑140 (MQ=255)

    cggcgCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGACCCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCtt                                                                                                                                         >  2:9431222/1‑140 (MQ=255)

    cggcgCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCtt                                                                                                                                         >  2:8225495/1‑140 (MQ=255)

        gcCAGACCCTAAAACTGGGGCGTCGACCCATTTCGCCACTCCAGCAAACCAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAACtttttt                                                                                                                                     <  2:2202607/140‑1 (MQ=18)

        gcCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCtttttt                                                                                                                                     >  1:4825524/1‑140 (MQ=255)

        gcCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCtttttt                                                                                                                                     >  1:3554429/1‑140 (MQ=255)

          cAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAATGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCAGTATGAGTGATGTGCTCTAACCATCTGAGCTACGTAGCCATCtttttttt                                                                                                                                   >  1:1551863/1‑140 (MQ=255)

          cAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCtttttttt                                                                                                                                   >  1:3839392/1‑140 (MQ=255)

          cAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCttttttta                                                                                                                                   >  2:7214340/1‑139 (MQ=255)

            gAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTcg                                                                                                                                 <  1:7151138/140‑1 (MQ=255)

               ccTAATTCGGGTGCGTCTAGCATTTTCGACTCGATCGAAAAATAAGTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGa                                                                                                                              <  1:10086773/140‑1 (MQ=17)

               ccTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGa                                                                                                                              <  1:9916371/140‑1 (MQ=255)

                  aaaTCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATAc                                                                                                                           <  2:3795939/140‑1 (MQ=255)

                   aaTCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCGTCTTTTTTTTCGCGATAca                                                                                                                          >  2:7793795/1‑139 (MQ=255)

                         gTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCg                                                                                                                    >  1:1135694/1‑140 (MQ=255)

                          tGCGTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCgg                                                                                                                   >  1:7898113/1‑140 (MQ=255)

                             gTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGt                                                                                                                >  2:3472834/1‑140 (MQ=255)

                              tCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGtt                                                                                                               >  2:742931/1‑140 (MQ=255)

                              tCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGtt                                                                                                               >  1:4704864/1‑140 (MQ=255)

                                    ctattCGCCACTCCCGCTACATAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGAGACCTGATCGGCGTTGCgggg                                                                                                         <  2:5573055/137‑1 (MQ=21)

                                    aaTTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCgggg                                                                                                         <  2:8971384/140‑1 (MQ=255)

                                    aaTTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCgggg                                                                                                         <  2:8792201/140‑1 (MQ=255)

                                       ttCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGgcgc                                                                                                      <  1:11547949/140‑1 (MQ=255)

                                         cGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCAt                                                                                                    <  2:2821057/140‑1 (MQ=255)

                                         cGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCAt                                                                                                    <  1:7999708/140‑1 (MQ=255)

                                            cACTCCCGCAAAATAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTAt                                                                                                 <  1:8864848/140‑1 (MQ=255)

                                            cACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTAt                                                                                                 <  1:8589157/140‑1 (MQ=255)

                                            cACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTAt                                                                                                 <  2:175162/140‑1 (MQ=255)

                                            cACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTAt                                                                                                 <  1:6375045/140‑1 (MQ=255)

                                            cACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTAt                                                                                                 <  1:1960593/140‑1 (MQ=255)

                                             aCTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATg                                                                                                <  2:4792366/140‑1 (MQ=255)

                                              cTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTCGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCCTTAGGc                                                                                               >  1:1653630/1‑140 (MQ=255)

                                                   gCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGtata                                                                                          <  2:6834427/140‑1 (MQ=255)

                                                                  ggCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTc                                                                           <  2:5501659/140‑1 (MQ=255)

                                                                       cgacgGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACct                                                                      >  1:10022008/1‑140 (MQ=255)

                                                                       cgacgGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACct                                                                      >  1:7719072/1‑140 (MQ=255)

                                                                           gggATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCttt                                                                  <  1:4119705/140‑1 (MQ=255)

                                                                             gATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCttttt                                                                >  2:7868164/1‑140 (MQ=255)

                                                                              aTTCGAACCTGTGACCCCATCATTATGAGTGATGTGCGCTAACCGACTGAGCGACGTAGCCATCTTTTTTTTCGGGATACCAGATCGGCGGTGCGGGGCGCAGTATGCGAGTAGAGGGATGCTGCGTCATGCTCTTTTTc                                                               >  2:11419421/1‑140 (MQ=18)

                                                                               ttCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCa                                                              >  1:9125205/1‑140 (MQ=255)

                                                                                      cTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGaaaa                                                       <  1:5609351/140‑1 (MQ=255)

                                                                                       tgtgACCCCTTCATTTTGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCATCCTCTTTTTCAAGGAAAAt                                                      >  2:2936735/1‑140 (MQ=255)

                                                                                        gtgACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAAtt                                                     >  2:1665058/1‑140 (MQ=255)

                                                                                         tgACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTg                                                    >  1:7558797/1‑140 (MQ=255)

                                                                                         tgACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTg                                                    >  2:613226/1‑140 (MQ=255)

                                                                                           aCCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCt                                                  <  2:5361092/140‑1 (MQ=255)

                                                                                                atcatTATGAGTGTTGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGACAATTGCTCGaaa                                             >  2:8423079/1‑140 (MQ=255)

                                                                                                atcatTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCCGCGTCCACCTCTTTTTCAAGGAAAATTGCTCGaaa                                             >  2:6559905/1‑140 (MQ=255)

                                                                                                atcatTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGaaa                                             >  1:2374002/1‑140 (MQ=255)

                                                                                                atcatTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGaaa                                             >  1:2284014/1‑140 (MQ=255)

                                                                                                atcatTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGaaa                                             >  1:1256041/1‑140 (MQ=255)

                                                                                                atcatTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACATTATAGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGAGTCAACCTCTTTTTCAAGGAAAATTGCTCGaaa                                             >  2:10160001/1‑140 (MQ=255)

                                                                                                 tcatTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAg                                            >  2:4157834/1‑140 (MQ=255)

                                                                                                    ttATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGa                                         <  1:4405095/140‑1 (MQ=255)

                                                                                                      aTGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTTCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGAcg                                       >  2:11047808/1‑139 (MQ=255)

                                                                                                       tGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTg                                      >  1:4056672/1‑140 (MQ=255)

                                                                                                         aGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGtt                                    >  2:9804947/1‑140 (MQ=255)

                                                                                                         aGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGtt                                    >  2:5121026/1‑140 (MQ=255)

                                                                                                         aGTGAGGTGCTCTAACCAACTGAGCTACGTAGCCACCTTTTTATTCGCGATACCTTATCGGCGTTGCGGGGCGCATGATGCGTAGAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGtt                                    <  2:852162/140‑1 (MQ=255)

                                                                                                          gTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATTCGTATAGAGCCTTGCAGCGTCAACCTCATTTTCAAGGAAAATTGCTCGAAAGTGAcgggtt                                   >  1:3405425/1‑135 (MQ=255)

                                                                                                           tGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTg                                  >  1:3152036/1‑140 (MQ=255)

                                                                                                             aTGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGt                                >  1:6162699/1‑140 (MQ=255)

                                                                                                             aTGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGt                                >  2:6325284/1‑140 (MQ=255)

                                                                                                             aTGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGt                                >  1:7606832/1‑140 (MQ=255)

                                                                                                              tgtgCTCTAACCAACTGAGCTACGTAGCCATGTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGAAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGtt                               >  2:6016602/1‑140 (MQ=255)

                                                                                                              tgtgCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTggttggtt                               >  2:7022100/1‑140 (MQ=255)

                                                                                                              tgtgCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGtt                               <  2:6237579/140‑1 (MQ=255)

                                                                                                              tgtgCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGtt                               <  1:10795920/140‑1 (MQ=255)

                                                                                                              tgtgCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGtt                               <  2:1461461/140‑1 (MQ=255)

                                                                                                              tgtgCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGtt                               <  2:7625692/140‑1 (MQ=255)

                                                                                                              tgagCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTAACGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCATTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGtt                               <  1:8448794/137‑1 (MQ=255)

                                                                                                                tgCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAg                             <  2:3023201/140‑1 (MQ=255)

                                                                                                                 gCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTAGAAAGTGACTGTTTGGTTAgg                            >  1:10666443/1‑140 (MQ=255)

                                                                                                                  ctctAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGt                           >  2:138900/1‑140 (MQ=255)

                                                                                                                  ctctAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGt                           <  2:2634697/140‑1 (MQ=255)

                                                                                                                   tctAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGtt                          >  1:3701756/1‑140 (MQ=255)

                                                                                                                   tctAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGtt                          >  1:6809695/1‑140 (MQ=255)

                                                                                                                     tAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGc                        >  1:7353737/1‑140 (MQ=255)

                                                                                                                     tAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATAGGCGTTGCGGGGCGCATTATGCGTATATAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGGTTGGTTATGTTGc                        >  2:2052901/1‑140 (MQ=255)

                                                                                                                       aCCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGa                      >  1:2886908/1‑140 (MQ=255)

                                                                                                                        ccAACTGAGCTCCGTAGCCATCTTTATACTCGCGCGACCTAATCGGCGTTGCGGGGCGCATTATGCGTATAGACCCTTGCAGCGTCAACCTCATTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGaa                     <  1:8089302/140‑1 (MQ=255)

                                                                                                                        ccAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTTTAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGaa                     <  1:10275497/140‑1 (MQ=255)

                                                                                                                        ccAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGaa                     <  2:10667449/140‑1 (MQ=255)

                                                                                                                            cTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGc                 >  1:514494/1‑140 (MQ=255)

                                                                                                                            cTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTGTGGTTAGGTTGCGAACAGc                 >  1:670704/1‑140 (MQ=255)

                                                                                                                            cTGAGCTACGTAGCCATCTTTTGTTTCGCGATACCTGATCGGCGTTGCGGGGCGCAGTATGCGTCTCGCGCCTTGCATCGTCAACCTCTTATGCTATTCAAATTGCTCGAAAGTGACTGGTGGGTTCGGTTGCGCACAGc                 >  2:11222130/1‑140 (MQ=255)

                                                                                                                             tGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCg                <  2:5841487/140‑1 (MQ=255)

                                                                                                                             tGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCg                <  2:4572280/140‑1 (MQ=255)

                                                                                                                             tGAGCTACGTAGCCATCTTTATTTTCGCGATACCGTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCg                <  2:10881345/140‑1 (MQ=255)

                                                                                                                               cgCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTCTAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTGTGGTTAGGTTGCGAACAGCGTg              >  2:3213954/2‑140 (MQ=255)

                                                                                                                               aGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCGTg              >  1:936909/1‑140 (MQ=255)

                                                                                                                               aGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCGTg              >  2:3959790/1‑140 (MQ=255)

                                                                                                                                gCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTAGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCGTgg             <  1:9656022/140‑1 (MQ=255)

                                                                                                                                 cTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCGTGgc            >  1:10483027/1‑140 (MQ=255)

                                                                                                                                      tAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTAGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCTAAAGTGACTGGTTGGTTAGGTTGCGAACAGCGTGGCGCtat       >  1:11166028/1‑140 (MQ=255)

                                                                                                                                        gCCATCTTTTTTTTCGCGATACCTGATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCGTGGCGCTatat     <  2:422875/140‑1 (MQ=255)

                                                                                                                                         ccATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCGTGGCGCTATAtt    >  1:5895425/1‑140 (MQ=255)

                                                                                                                                           aTCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCGTGGCGCTATATTCg  >  1:5691117/1‑140 (MQ=255)

CTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCGTGGCGCTATATTCG  >  NZ_CP025268/696043‑696321

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.