Predicted mutation
evidence seq id position mutation annotation gene description
JC NZ_CP025268 2,896,268 +CAC coding (42/258 nt) ygcO → ferredoxin family protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP025268 = 28962687 (0.010)747 (1.130)
+CAC
151/268 0.1 99.1% coding (42/258 nt) ygcO ferredoxin family protein
?NZ_CP025268 2896269 = 7 (0.010)coding (43/258 nt) ygcO ferredoxin family protein

Only 100 of 759 total aligned reads displayed.

AACCTGTTCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAACCCGTAATCTCTGGCGCGTTGCTGATG‑‑‑CGCCG‑‑‑ATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGCCGTTT  >  NZ_CP025268/2896136‑2896408
                                                                                                                                           |                                                                                                                                           
ataaacctgttccacctctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcaca                                                                                                                                             <  1:1979626‑M2/1‑1 (MQ=255)
ataaacctgttccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcaca                                                                                                                                             <  1:7988161‑M2/1‑1 (MQ=255)
ataaacctgttccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcaca                                                                                                                                             <  2:1202760‑M2/1‑1 (MQ=255)
 taaacctgttccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacAt                                                                                                                                            >  1:8828555‑M2/139‑140 (MQ=255)
 taaacctgttccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacAt                                                                                                                                            <  2:573094‑M2/2‑1 (MQ=255)
    acctgttccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGt                                                                                                                                         >  1:9269424‑M2/136‑140 (MQ=255)
     cctgttccaccgctgcgccagttattctggcatcttttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcaaATTGtt                                                                                                                                        <  2:6781415‑M2/6‑1 (MQ=255)
       tgttccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTcc                                                                                                                                      <  1:7326313‑M2/8‑1 (MQ=255)
        gttccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCg                                                                                                                                     >  2:8248573‑M2/132‑140 (MQ=255)
          tccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGc                                                                                                                                   <  1:3397099‑M2/11‑1 (MQ=255)
          tccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGc                                                                                                                                   >  1:4055734‑M2/130‑140 (MQ=255)
          tccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGc                                                                                                                                   <  2:48706‑M2/11‑1 (MQ=255)
               cgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACt                                                                                                                              <  2:4115363‑M2/16‑1 (MQ=255)
                   gcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGt                                                                                                                          >  1:8280950‑M2/121‑140 (MQ=255)
                   gcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGt                                                                                                                          >  1:10076349‑M2/121‑140 (MQ=255)
                   gcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGt                                                                                                                          >  2:6238684‑M2/121‑140 (MQ=255)
                    cgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGtt                                                                                                                         >  1:4844674‑M2/120‑140 (MQ=255)
                    cAGTTATTCTGGCATCATTGACGGCGTCACGGCCTGTCGCAGCTGGCGGGCGATGTTATCCGGAGTCTGCGATGTCTGTAGCCCGTAATATCTGGCGCGTTGATGATG‑‑‑CGCCGCACATTGTTACGGCTGACTCCGTTGAg                                                                                                                      <  2:6149716/140‑1 (MQ=255)
                     gccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTg                                                                                                                        <  1:11469824‑M2/22‑1 (MQ=255)
                           tattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGtt                                                                                                                         >  1:8557035‑M2/113‑133 (MQ=255)
                            attctggcatcatttacgtcgtcacggcctttggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCa                                                                                                                 <  1:10763232‑M2/29‑1 (MQ=255)
                                    atcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAg                                                                                                         <  1:9474844‑M2/37‑1 (MQ=255)
                                     tcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGa                                                                                                        <  2:2541155‑M2/38‑1 (MQ=255)
                                     tcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGATGAGCGCCAGACGGCAGa                                                                                                        >  1:10959942‑M2/103‑140 (MQ=255)
                                      catttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGaa                                                                                                       <  1:1520348‑M2/39‑1 (MQ=255)
                                      catttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGaa                                                                                                       <  2:8148163‑M2/39‑1 (MQ=255)
                                      catttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGaa                                                                                                       <  1:6672032‑M2/39‑1 (MQ=255)
                                          tacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGt                                                                                                   <  1:1251241‑M2/43‑1 (MQ=255)
                                          tacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtcggcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGt                                                                                                   <  2:7866629‑M2/43‑1 (MQ=255)
                                               cgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGAtt                                                                                              <  1:10589493‑M2/48‑1 (MQ=255)
                                                gtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCa                                                                                                                 >  1:464371‑M2/92‑120 (MQ=255)
                                                gtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTa                                                                                             >  1:911108‑M2/92‑140 (MQ=255)
                                                  cacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAAc                                                                                           >  2:5246763‑M2/90‑140 (MQ=255)
                                                   acggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACg                                                                                          >  2:9392949‑M2/89‑140 (MQ=255)
                                                       cctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTg                                                                                      >  1:11260294‑M2/85‑140 (MQ=255)
                                                           tggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTATCGCCTGTCCg                                                                                  >  2:7632957‑M2/81‑140 (MQ=255)
                                                           tggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCg                                                                                  >  1:10273861‑M2/81‑140 (MQ=255)
                                                           tggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCg                                                                                  <  2:1427673‑M2/60‑1 (MQ=255)
                                                                tctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGACCGGTTGATTAACGCCTGTccggccgg                                                                             >  2:2816211‑M2/76‑140 (MQ=255)
                                                                   ggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCt                                                                          >  2:8988839‑M2/73‑140 (MQ=255)
                                                                         tgtgctCAGGAGTCTGCTATGGCTGTAGCCCTTAATCTCTGGCGCGTTGCTGATGGGACGCAC‑‑‑ATTGTACCGGCTGTCTCGTTTGAGATCATGACGGCTGAAAGTTTGATTAACGTCTGTCCGGCAGGTATTTTTTAGCt                                                                 <  2:1847317/135‑1 (MQ=255)
                                                                          gatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCg                                                                   <  1:6048949‑M2/75‑1 (MQ=255)
                                                                            tgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCt                                                                 <  1:10432946‑M2/77‑1 (MQ=255)
                                                                            tgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCt                                                                 <  1:2663999‑M2/77‑1 (MQ=255)
                                                                            tgttatcaggagtctgcgaggtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacAGTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCt                                                                 <  2:165818‑M2/77‑1 (MQ=255)
                                                                             gttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTc                                                                <  2:4999233‑M2/78‑1 (MQ=255)
                                                                             gttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTc                                                                <  1:3697911‑M2/78‑1 (MQ=255)
                                                                              ttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTca                                                               <  2:3443928‑M2/79‑1 (MQ=255)
                                                                              ttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTca                                                               <  1:709952‑M2/79‑1 (MQ=255)
                                                                                atcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTcaca                                                             >  2:7228290‑M2/60‑140 (MQ=255)
                                                                                       gtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAg                                                      >  1:3902700‑M2/53‑140 (MQ=255)
                                                                                         ctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGt                                                    <  2:4235260‑M2/90‑1 (MQ=255)
                                                                                         ctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGt                                                    <  1:5623423‑M2/90‑1 (MQ=255)
                                                                                         ctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGt                                                    <  2:10295473‑M2/90‑1 (MQ=255)
                                                                                          tgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGaaggga                                                   >  2:2246132‑M2/50‑138 (MQ=255)
                                                                                          tgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTa                                                   >  1:6812380‑M2/50‑140 (MQ=255)
                                                                                          tgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTa                                                   >  2:5986643‑M2/50‑140 (MQ=255)
                                                                                          tgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTa                                                   >  2:10163075‑M2/50‑140 (MQ=255)
                                                                                          tgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTa                                                   >  1:415930‑M2/50‑140 (MQ=255)
                                                                                          tgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTa                                                   >  1:5031991‑M2/50‑140 (MQ=255)
                                                                                          tgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTGGTTCGCTCACACCGGCAGGTa                                                   >  2:855127‑M2/50‑140 (MQ=255)
                                                                                             gatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACt                                                <  1:6609630‑M2/94‑1 (MQ=255)
                                                                                             gatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACt                                                <  2:11059637‑M2/94‑1 (MQ=255)
                                                                                             gatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACt                                                <  2:3100740‑M2/94‑1 (MQ=255)
                                                                                              atgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACtt                                               <  1:5755081‑M2/95‑1 (MQ=255)
                                                                                                     tagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTAtt                                        <  2:3807243‑M2/102‑1 (MQ=255)
                                                                                                        cccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGAc                                     <  1:1827184‑M2/105‑1 (MQ=255)
                                                                                                        cccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGAc                                     >  1:5400017‑M2/36‑140 (MQ=255)
                                                                                                           gtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTGTTGACTAt                                  >  1:11086755‑M2/33‑140 (MQ=255)
                                                                                                           gtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTAt                                  >  1:2552140‑M2/33‑140 (MQ=255)
                                                                                                            taatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACAGGAAGGTAACTTACGTATTGACTATc                                 >  2:10009808‑M2/32‑140 (MQ=255)
                                                                                                             aatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCg                                <  2:6304433‑M2/110‑1 (MQ=255)
                                                                                                               tctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGGCTATCGCa                              <  2:9864847‑M2/112‑1 (MQ=255)
                                                                                                               tctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa                              <  2:9694222‑M2/112‑1 (MQ=255)
                                                                                                               tctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa                              <  1:2306936‑M2/112‑1 (MQ=255)
                                                                                                               tctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa                              <  2:2028352‑M2/112‑1 (MQ=255)
                                                                                                               tctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa                              <  2:921246‑M2/112‑1 (MQ=255)
                                                                                                               tctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa                              <  1:2916567‑M2/112‑1 (MQ=255)
                                                                                                               tctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa                              <  2:8804222‑M2/112‑1 (MQ=255)
                                                                                                               tctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa                              <  1:4474870‑M2/112‑1 (MQ=255)
                                                                                                               tctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa                              <  1:6483696‑M2/112‑1 (MQ=255)
                                                                                                               tctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa                              <  1:7525776‑M2/112‑1 (MQ=255)
                                                                                                               tctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa                              <  2:6479247‑M2/112‑1 (MQ=255)
                                                                                                               tctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa                              <  2:7058812‑M2/112‑1 (MQ=255)
                                                                                                               tctctggcgcgttgctgatgcgccgcacATTGGTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa                              <  2:7501527‑M2/112‑1 (MQ=255)
                                                                                                               tctctggcgcgttgctgatgcgacgcacATTGTTCCGGATGACTCCTTTGAGCGCCAGACGGCAGAACTGTTGATTAACGCCTTTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACTTATTGACTATCgct                              <  1:7719483‑M2/112‑2 (MQ=255)
                                                                                                                  ctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGtt                           <  1:9758422‑M2/115‑1 (MQ=255)
                                                                                                                     gcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGcc                        <  1:3142704‑M2/118‑1 (MQ=255)
                                                                                                                      cgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTACCTTACGTATGGACGATCGCAGTTgccg                       >  2:10830789‑M2/22‑139 (MQ=255)
                                                                                                                       gcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTg                      <  1:8136072‑M2/120‑1 (MQ=255)
                                                                                                                       gcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTg                      <  2:10555552‑M2/120‑1 (MQ=255)
                                                                                                                       gcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTg                      <  2:4621902‑M2/120‑1 (MQ=255)
                                                                                                                           tgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAgt                  >  1:8658535‑M2/17‑140 (MQ=255)
                                                                                                                             ctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAgtgt                >  2:3924917‑M2/15‑140 (MQ=255)
                                                                                                                             ctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGAGTACCGCCTGTCCGGCAGGTCGTTTTTCGCTCACGCCGGAAGGTAACTGACGGATTGACTATCGCAGTGGCCTGGAgtgt                >  2:11222911‑M2/15‑140 (MQ=255)
                                                                                                                                atgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGc             <  2:8927769‑M2/129‑1 (MQ=255)
                                                                                                                                     ccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCAc           <  1:6319364‑M2/131‑1 (MQ=255)
                                                                                                                                     ccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTg        >  2:5446026‑M2/7‑140 (MQ=255)
                                                                                                                                       gcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGcc      >  1:11598420‑M2/5‑140 (MQ=255)
                                                                                                                                          cATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGCCGtt   <  2:4478161‑M2/139‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                           
AACCTGTTCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAACCCGTAATCTCTGGCGCGTTGCTGATG‑‑‑CGCCG‑‑‑ATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGCCGTTT  >  NZ_CP025268/2896136‑2896408

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.