| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NZ_CP025268 | 3,864,444 | +GCC | pseudogene (1078/1613 nt) | CXP41_RS20140 ← | PTS sugar transporter subunit IIB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP025268 | = 3864444 | 12 (0.020) | 586 (0.890) +GCC |
132/268 | 0.4 | 98.0% | pseudogene (1078/1613 nt) | CXP41_RS20140 | PTS sugar transporter subunit IIB |
| ? | NZ_CP025268 | 3864445 = | 12 (0.020) | pseudogene (1077/1613 nt) | CXP41_RS20140 | PTS sugar transporter subunit IIB | |||||
Only 100 of 615 total aligned reads displayed.
CGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTCAATCAGACCTCCG‑CC‑‑A‑‑TGTTCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGGTTGCGG > NZ_CP025268/3864312‑3864584 | gcggaaaaccacgaagtacagcagggtaaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccca < 2:1786233‑M2/2‑1 (MQ=255) cggaaaaccacgaagtacagcagggtaaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgcccac < 1:3206079‑M2/3‑1 (MQ=255) cggaaaaccacgaagtacagcagggtaaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgcccac > 1:11204661‑M2/138‑140 (MQ=255) gaaaaccacgaagtacagcagggtaaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgcccacca < 2:10763102‑M2/5‑1 (MQ=255) aaaccacgaagtacagcagggtaaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgcccaccac‑‑‑a > 1:10358909‑M2/134‑140 (MQ=255) aaccacgaagtacagcagggtaaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgcccaccac‑‑‑ac < 2:9737873‑M2/8‑1 (MQ=255) aaccacgaagtacagcagggtaaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgccgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgcccaccac‑‑‑ac < 1:9475905‑M2/8‑1 (MQ=255) ccacgaagtacagcagggtaaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaaactagtcaatcagacctccgcccatgttgcccaccac‑‑‑acca < 2:9494005‑M2/10‑1 (MQ=255) agtacagcagggtaaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAgaga > 2:4765813‑M2/125‑140 (MQ=255) agtacagcagggtaaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAgaga < 1:6751075‑M2/16‑1 (MQ=255) agtacagcagggtaaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAgaga < 2:9097784‑M2/16‑1 (MQ=255) agtacagcagggtaaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAgaga > 1:10043007‑M2/125‑140 (MQ=255) agtacagcagggtaaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAgaga > 1:11429708‑M2/125‑140 (MQ=255) cagcagggtaaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACa > 2:9323265‑M2/121‑140 (MQ=255) ggtaaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACgg > 2:2741340‑M2/115‑140 (MQ=255) ggtaaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACgg > 1:6666711‑M2/115‑140 (MQ=255) ggtaaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACgg > 2:5264859‑M2/115‑140 (MQ=255) gtaaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGt < 1:3672360‑M2/27‑1 (MQ=255) taaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTc > 2:8596787‑M2/113‑140 (MQ=255) taaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTc > 2:537679‑M2/113‑140 (MQ=255) taaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTc > 2:7034425‑M2/113‑140 (MQ=255) taaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTc > 2:146127‑M2/113‑140 (MQ=255) taaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTc > 2:7676943‑M2/113‑140 (MQ=255) taaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTc < 1:9236849‑M2/28‑1 (MQ=255) aacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGa > 1:1393621‑M2/105‑140 (MQ=255) aacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGa > 1:8791086‑M2/105‑140 (MQ=255) aacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGa > 1:5626409‑M2/105‑140 (MQ=255) acccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAg < 1:4628484‑M2/37‑1 (MQ=255) acccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAg < 2:1036855‑M2/37‑1 (MQ=255) cccaatggcgatttgggtcagcatcctatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAgg > 2:24797‑M2/103‑140 (MQ=255) cccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAgg > 2:10054779‑M2/103‑140 (MQ=255) cccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAgg > 2:6222755‑M2/103‑140 (MQ=255) cccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAgg > 1:1609367‑M2/103‑140 (MQ=255) ccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGgc < 1:4142818‑M2/39‑1 (MQ=255) aatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGgccg > 2:5888386‑M2/100‑140 (MQ=255) aatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGgccg < 2:11364780‑M2/41‑1 (MQ=255) atggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGgccgc < 2:7136234‑M2/42‑1 (MQ=255) tggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGgccgcc > 2:2192130‑M2/98‑140 (MQ=255) tggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGgccgcc > 2:9216727‑M2/98‑140 (MQ=255) tggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGgccgcc > 1:2439051‑M2/98‑140 (MQ=255) cgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGgccg > 1:9069946‑M2/95‑135 (MQ=255) cgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGc < 2:6763602‑M2/46‑1 (MQ=255) cgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGc < 1:4435736‑M2/46‑1 (MQ=255) cgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGc > 2:7528796‑M2/95‑140 (MQ=255) cgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagtattgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGc < 2:5703927‑M2/46‑1 (MQ=255) cgatttgggtcagcatcatatccgcgtgggtgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGc < 2:11120370‑M2/46‑1 (MQ=255) atttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑TCCAATGAGATACATAACGGTCGACATTGAGGCCGCCAGCAc > 2:4943025‑M2/93‑140 (MQ=255) atttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCAc > 2:6024336‑M2/93‑140 (MQ=255) atttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCAc > 1:11070547‑M2/93‑140 (MQ=255) tttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACg < 2:8214818‑M2/49‑1 (MQ=255) tttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACg < 1:10698533‑M2/49‑1 (MQ=255) tgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctacgcccatgttgccCACAAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCTCGGc < 2:8849034‑M2/51‑1 (MQ=255) tgggtcagcatcatatccgcgtggttgctgaacatcgggatacagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGCTACCTTACGGTCGACATTGAGGCCGCCAGCACGGc > 2:8511010‑M2/90‑140 (MQ=255) cgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCa < 2:5054107‑M2/68‑1 (MQ=255) gcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCaa > 2:8074178‑M2/72‑140 (MQ=255) gcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCaa > 1:263194‑M2/72‑140 (MQ=255) gcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCaa > 1:3620071‑M2/72‑140 (MQ=255) gcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCaa > 1:7337770‑M2/72‑140 (MQ=255) cgTGGTTGCTGAACATCGGGATCCCGGTTTGCGGTAAAACCTAGTCCATGAGACCTCCGCCC‑‑A‑‑TGTTGACCACCTGACCAATGAGATTCATTACGGTCGACAGTGAGGCCGCCAGCAGGGCGTGTAGCGCAGTCAGcgag > 2:3893386/1‑137 (MQ=255) cgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAAc > 1:5943081‑M2/71‑140 (MQ=255) cgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAAc > 1:7778089‑M2/71‑140 (MQ=255) gttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTg > 1:7251548‑M2/67‑140 (MQ=255) ttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGa > 1:11574375‑M2/66‑140 (MQ=255) tgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGaa < 2:1582708‑M2/76‑1 (MQ=255) aacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGaa < 2:3129815‑M2/81‑1 (MQ=255) atcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAg < 1:3980848‑M2/84‑1 (MQ=255) acccgATCCAGTTTTGCGGTAAACCCTAGTCAATCAGACCTCCG‑CCCAAGCTGCCCACCAC‑‑‑ACCAAACAGAAACATTACGGTCGCCCTTGAGCCCGCCAGCACGGCGAGGCCCGCACACACCAACGGTCAAATGAACAgg < 2:3023896/136‑1 (MQ=255) cgggctcccgttttgcggtaaaacctagtcactcagacctccgcccatggtgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGa < 2:2041643‑M2/86‑1 (MQ=255) ggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAg < 1:8324360‑M2/88‑1 (MQ=255) atccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGt < 2:3620252‑M2/90‑1 (MQ=255) tccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTa < 1:8519262‑M2/91‑1 (MQ=255) tgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAg > 1:7415423‑M2/42‑140 (MQ=255) ggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCgg < 1:7050260‑M2/102‑1 (MQ=255) ggtaaaacctagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCgg < 2:11602252‑M2/102‑1 (MQ=255) aaacctcgtcaatcagtcctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAATCAGCAACGGTGAAATGACCTGGACGGTAATTTCCAGCGGTTCg > 1:3395601‑M2/35‑140 (MQ=255) tagtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAAt < 1:8074179‑M2/111‑1 (MQ=255) gtcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTc > 2:11033975‑M2/28‑140 (MQ=255) tcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTcc > 1:9789509‑M2/27‑140 (MQ=255) tcaatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTcc > 1:1789253‑M2/27‑140 (MQ=255) aatcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCcca > 1:757519‑M2/25‑140 (MQ=255) atcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCccac < 2:337621‑M2/117‑1 (MQ=255) atcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCccac < 1:2971449‑M2/117‑1 (MQ=255) atcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACAGTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCccac < 2:10622124‑M2/117‑1 (MQ=255) tcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCccacc > 2:11464196‑M2/23‑140 (MQ=255) tcagacctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCccacc < 1:5812433‑M2/118‑1 (MQ=255) acctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCa < 2:7271103‑M2/122‑1 (MQ=255) acctccgcccatgtggccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCa < 2:3254336‑M2/122‑1 (MQ=255) ctccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATg < 1:10159862‑M2/124‑1 (MQ=255) ccgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGc > 1:621385‑M2/15‑140 (MQ=255) cgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCg > 1:1896781‑M2/14‑140 (MQ=255) cgcccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCg > 2:4495962‑M2/14‑140 (MQ=255) cccatgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGt > 1:9626982‑M2/12‑140 (MQ=255) atgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTaa > 1:10592531‑M2/9‑140 (MQ=255) tgttgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAg > 1:5072838‑M2/8‑140 (MQ=255) tgccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGGtt > 1:4804508‑M2/5‑140 (MQ=255) gccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGGTTg > 1:6422096‑M2/4‑140 (MQ=255) gccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGGTTg < 1:5417089‑M2/137‑1 (MQ=255) gccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCATGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGGTTg < 1:10892185‑M2/137‑1 (MQ=255) ccCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGGTTGc > 1:2229099‑M2/3‑140 (MQ=255) ccCACCAC‑‑‑ACCAAAGAGAGACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGGTTGc < 2:4242155‑M2/138‑1 (MQ=255) | CGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTCAATCAGACCTCCG‑CC‑‑A‑‑TGTTCACCAC‑‑‑ACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGGTTGCGG > NZ_CP025268/3864312‑3864584 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |